FFCP PHASE1:Hg19::chr10:88439907..88439917,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:88439907..88439917,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr10:88439907..88439917,- | |description=CAGE_peak_at_chr10:88439907..88439917,- | ||
|id=chr10:88439907..88439917,- | |id=chr10:88439907..88439917,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;6.62e-41;2!DOID:178;3.12e-21;1!DOID:326;3.12e-21;1!DOID:3978;3.12e-21;1!DOID:3394;3.12e-21;1!DOID:5844;3.12e-21;1!DOID:1287;4.92e-21;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0007100;1.67e-28;25!UBERON:0004151;1.39e-27;3!UBERON:0002084;2.08e-21;1!UBERON:0002082;2.08e-21;1!UBERON:0002079;3.12e-21;1!UBERON:0002146;6.31e-21;1!UBERON:0002426;6.31e-21;1!UBERON:0003831;6.31e-21;1!UBERON:0003898;6.31e-21;1!UBERON:0004830;6.31e-21;1!UBERON:0005623;6.31e-21;1!UBERON:0003830;6.31e-21;1!UBERON:0005175;6.31e-21;1!UBERON:0001774;6.31e-21;1!UBERON:0001103;6.31e-21;1!UBERON:0000948;8.57e-15;22!UBERON:0002081;2.60e-11;2!UBERON:0000341;3.70e-11;2!UBERON:0005090;3.70e-11;2!UBERON:0001630;3.70e-11;2!UBERON:0001723;7.26e-08;3!UBERON:0003978;7.26e-08;3!UBERON:0000946;7.26e-08;3!UBERON:0001033;7.26e-08;3 | |ontology_enrichment_development_v019=UBERON:0010226;2.08e-21;1!UBERON:0010227;3.12e-21;1!UBERON:0004140;6.31e-21;1 | ||
|ontology_enrichment_disease=DOID:114!1.08e-13!2;DOID:178!1.20e-07!1;DOID:326!1.20e-07!1;DOID:3978!1.20e-07!1;DOID:3394!1.20e-07!1;DOID:5844!1.20e-07!1;DOID:1287!2.93e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.62e-41;2!DOID:178;3.12e-21;1!DOID:326;3.12e-21;1!DOID:3978;3.12e-21;1!DOID:3394;3.12e-21;1!DOID:5844;3.12e-21;1!DOID:1287;4.92e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.99e-41,2;DOID:178,2.82e-21,1;DOID:326,2.82e-21,1;DOID:3978,2.82e-21,1;DOID:3394,2.82e-21,1;DOID:5844,2.82e-21,1;DOID:1287,4.68e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-29!115;UBERON:0007100!1.69e-13!27;UBERON:0000341!3.67e-13!2;UBERON:0004151!2.22e-09!3;UBERON:0003978!3.92e-09!3;UBERON:0009751!3.92e-09!3;UBERON:0000946!3.92e-09!3;UBERON:0002523!3.92e-09!3;UBERON:0005983!3.92e-09!3;UBERON:0002165!3.92e-09!3;UBERON:0002062!3.92e-09!3;UBERON:0007280!3.92e-09!3;UBERON:0001723!5.62e-09!3;UBERON:0001033!5.62e-09!3;UBERON:0010056!5.62e-09!3;UBERON:0003103!1.23e-08!69;UBERON:0009663!5.15e-08!7;UBERON:0002084!1.06e-07!1;UBERON:0002082!1.06e-07!1;UBERON:0004706!1.06e-07!1;UBERON:0002079!1.27e-07!1;UBERON:0002426!1.44e-07!1;UBERON:0003831!1.44e-07!1;UBERON:0003898!1.44e-07!1;UBERON:0004830!1.44e-07!1;UBERON:0001774!1.44e-07!1;UBERON:0003830!1.44e-07!1;UBERON:0005175!1.44e-07!1;UBERON:0003897!1.44e-07!1;UBERON:0001103!1.44e-07!1;UBERON:0010084!1.44e-07!1;UBERON:0002146!1.54e-07!1;UBERON:0005623!1.54e-07!1;UBERON:0002135!2.09e-07!1;UBERON:0000989!2.23e-07!1;UBERON:0008811!2.23e-07!1;UBERON:0006258!2.23e-07!1;UBERON:0005876!2.23e-07!1;UBERON:0004874!2.23e-07!1;UBERON:0001301!4.08e-07!1;UBERON:0002038!4.34e-07!1;UBERON:0009661!4.34e-07!1;UBERON:0002298!6.00e-07!8;UBERON:0002902!6.20e-07!1;UBERON:0009899!6.20e-07!1;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.67e-28;25!UBERON:0004151;1.39e-27;3!UBERON:0002084;2.08e-21;1!UBERON:0002082;2.08e-21;1!UBERON:0002079;3.12e-21;1!UBERON:0002146;6.31e-21;1!UBERON:0002426;6.31e-21;1!UBERON:0003831;6.31e-21;1!UBERON:0003898;6.31e-21;1!UBERON:0004830;6.31e-21;1!UBERON:0005623;6.31e-21;1!UBERON:0003830;6.31e-21;1!UBERON:0005175;6.31e-21;1!UBERON:0001774;6.31e-21;1!UBERON:0001103;6.31e-21;1!UBERON:0000948;8.57e-15;22!UBERON:0002081;2.60e-11;2!UBERON:0000341;3.70e-11;2!UBERON:0005090;3.70e-11;2!UBERON:0001630;3.70e-11;2!UBERON:0001723;7.26e-08;3!UBERON:0003978;7.26e-08;3!UBERON:0000946;7.26e-08;3!UBERON:0001033;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.39e-27,3;UBERON:0007100,1.90e-26,27;UBERON:0002084,1.88e-21,1;UBERON:0002082,1.88e-21,1;UBERON:0010226,1.88e-21,1;UBERON:0002079,3.45e-21,1;UBERON:0002426,5.16e-21,1;UBERON:0003831,5.16e-21,1;UBERON:0003898,5.16e-21,1;UBERON:0004830,5.16e-21,1;UBERON:0003830,5.16e-21,1;UBERON:0005175,5.16e-21,1;UBERON:0001774,5.16e-21,1;UBERON:0001103,5.16e-21,1;UBERON:0010084,5.16e-21,1;UBERON:0002146,6.31e-21,1;UBERON:0005623,6.31e-21,1;UBERON:0003103,4.19e-14,68;UBERON:0000948,1.27e-13,24;UBERON:0005498,1.27e-13,24;UBERON:0004140,1.27e-13,24;UBERON:0009881,1.27e-13,24;UBERON:0004141,1.27e-13,24;UBERON:0003084,1.27e-13,24;UBERON:0007005,1.27e-13,24;UBERON:0004139,1.27e-13,24;UBERON:0004291,1.27e-13,24;UBERON:0002081,2.73e-11,2;UBERON:0010227,2.73e-11,2;UBERON:0005090,3.35e-11,2;UBERON:0001630,3.35e-11,2;UBERON:0000341,4.52e-11,2;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,1.3749625440701,0,2.1964690054889,4.29226048136571,0.223171457441873,1.81395375714161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821302454849976,3.4794432940146,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.476128862927481,0,0,0,0,0,0.217716747896961,1.36893320434112,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,1.3749625440701,0,2.1964690054889,4.29226048136571,0.223171457441873,1.81395375714161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821302454849976,3.4794432940146,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.476128862927481,0,0,0,0,0,0.217716747896961,1.36893320434112,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:88439907..88439917,- | |short_description=p@chr10:88439907..88439917,- | ||
}} | }} |
Latest revision as of 16:20, 23 July 2015
Short description: | p@chr10:88439907..88439917, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88439907..88439917, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 5.99e-41 | 2 |
vascular disease | 2.82e-21 | 1 |
ischemia | 2.82e-21 | 1 |
extrinsic cardiomyopathy | 2.82e-21 | 1 |
myocardial ischemia | 2.82e-21 | 1 |
myocardial infarction | 2.82e-21 | 1 |
cardiovascular system disease | 4.68e-21 | 4 |