FFCP PHASE1:Hg19::chr10:81088710..81088726,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:81088710..81088726,+ | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr10:81088710..81088726,+ | |description=CAGE_peak_at_chr10:81088710..81088726,+ | ||
|id=chr10:81088710..81088726,+ | |id=chr10:81088710..81088726,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.20e-92!42;CL:0000860!5.17e-86!45;CL:0002009!1.47e-64!65;CL:0000557!1.41e-58!71;CL:0002194!2.01e-58!63;CL:0000576!2.01e-58!63;CL:0000040!2.01e-58!63;CL:0000559!2.01e-58!63;CL:0000839!5.59e-52!70;CL:0000766!2.18e-47!76;CL:0000763!1.08e-34!112;CL:0000049!1.08e-34!112;CL:0002031!8.54e-33!124;CL:0002087!3.68e-32!119;CL:0000738!3.31e-30!140;CL:0000037!3.20e-23!172;CL:0000566!3.20e-23!172;CL:0002032!7.29e-23!165;CL:0000837!7.29e-23!165;CL:0000988!1.54e-21!182;CL:0001014!1.19e-09!2;CL:0001016!1.19e-09!2;CL:0000134!5.21e-08!358;CL:0002320!1.03e-07!365;CL:0000219!2.59e-07!390 | |ontology_enrichment_celltype=CL:0002057!1.20e-92!42;CL:0000860!5.17e-86!45;CL:0002009!1.47e-64!65;CL:0000557!1.41e-58!71;CL:0002194!2.01e-58!63;CL:0000576!2.01e-58!63;CL:0000040!2.01e-58!63;CL:0000559!2.01e-58!63;CL:0000839!5.59e-52!70;CL:0000766!2.18e-47!76;CL:0000763!1.08e-34!112;CL:0000049!1.08e-34!112;CL:0002031!8.54e-33!124;CL:0002087!3.68e-32!119;CL:0000738!3.31e-30!140;CL:0000037!3.20e-23!172;CL:0000566!3.20e-23!172;CL:0002032!7.29e-23!165;CL:0000837!7.29e-23!165;CL:0000988!1.54e-21!182;CL:0001014!1.19e-09!2;CL:0001016!1.19e-09!2;CL:0000134!5.21e-08!358;CL:0002320!1.03e-07!365;CL:0000219!2.59e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-124;33!CL:0002057;3.07e-124;33!CL:0000473;5.92e-85;39!CL:0000234;5.92e-85;39!CL:0000576;9.14e-55;48!CL:0000766;6.02e-33;69!CL:0002087;6.18e-16;104!CL:0000763;3.59e-15;100!CL:0000738;5.78e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.06e-106,42;CL:0002057,5.06e-106,42;CL:0000473,2.69e-92,48;CL:0000234,2.69e-92,48;CL:0002194,4.50e-73,59;CL:0000576,4.50e-73,59;CL:0000040,4.50e-73,59;CL:0000559,4.50e-73,59;CL:0002009,1.37e-70,61;CL:0000839,4.92e-65,66;CL:0000557,5.07e-64,67;CL:0000766,2.27e-59,72;CL:0000763,1.87e-38,108;CL:0000049,1.87e-38,108;CL:0002087,6.83e-36,115;CL:0002031,3.05e-34,120;CL:0000738,9.05e-30,136;CL:0002032,1.52e-24,161;CL:0000837,1.52e-24,161;CL:0000037,2.35e-23,168;CL:0000988,5.77e-22,177;CL:0000134,7.17e-09,354;CL:0002320,1.30e-08,361;CL:0000219,1.05e-07,386;CL:0000723,2.92e-07,433;CL:0000034,4.78e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.22e-80;42!CL:0000049;1.40e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.89e-51!80;UBERON:0001474!3.14e-47!86;UBERON:0002390!2.00e-41!102;UBERON:0003061!2.00e-41!102;UBERON:0004765!3.24e-39!101;UBERON:0001434!3.24e-39!101;UBERON:0002193!4.19e-37!112;UBERON:0002405!1.32e-33!115;UBERON:0002204!5.91e-21!167;UBERON:0003081!5.41e-17!216;UBERON:0002384!5.35e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-56,76;UBERON:0001474,9.59e-52,82;UBERON:0004765,7.54e-47,90;UBERON:0002405,3.16e-45,93;UBERON:0002390,9.64e-43,98;UBERON:0003061,9.64e-43,98;UBERON:0001434,8.11e-42,100;UBERON:0002193,1.87e-38,108;UBERON:0002204,1.61e-23,167;UBERON:0003081,1.24e-18,203;UBERON:0000926,1.65e-10,315;UBERON:0004120,1.65e-10,315;UBERON:0006603,1.65e-10,315;UBERON:0002384,2.91e-08,371 | |||
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|short_description=p@chr10:81088710..81088726,+ | |short_description=p@chr10:81088710..81088726,+ | ||
}} | }} |
Latest revision as of 16:01, 23 July 2015
Short description: | p@chr10:81088710..81088726, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:81088710..81088726, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.06e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.06e-106 | 42 |
defensive cell | 2.69e-92 | 48 |
phagocyte | 2.69e-92 | 48 |
monopoietic cell | 4.50e-73 | 59 |
monocyte | 4.50e-73 | 59 |
monoblast | 4.50e-73 | 59 |
promonocyte | 4.50e-73 | 59 |
macrophage dendritic cell progenitor | 1.37e-70 | 61 |
myeloid lineage restricted progenitor cell | 4.92e-65 | 66 |
granulocyte monocyte progenitor cell | 5.07e-64 | 67 |
myeloid leukocyte | 2.27e-59 | 72 |
myeloid cell | 1.87e-38 | 108 |
common myeloid progenitor | 1.87e-38 | 108 |
nongranular leukocyte | 6.83e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 3.05e-34 | 120 |
leukocyte | 9.05e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-24 | 161 |
hematopoietic stem cell | 2.35e-23 | 168 |
hematopoietic cell | 5.77e-22 | 177 |
mesenchymal cell | 7.17e-09 | 354 |
connective tissue cell | 1.30e-08 | 361 |
motile cell | 1.05e-07 | 386 |
somatic stem cell | 2.92e-07 | 433 |
stem cell | 4.78e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.40e-56 | 76 |
bone element | 9.59e-52 | 82 |
skeletal element | 7.54e-47 | 90 |
immune system | 3.16e-45 | 93 |
hematopoietic system | 9.64e-43 | 98 |
blood island | 9.64e-43 | 98 |
skeletal system | 8.11e-42 | 100 |
hemolymphoid system | 1.87e-38 | 108 |
musculoskeletal system | 1.61e-23 | 167 |
lateral plate mesoderm | 1.24e-18 | 203 |
mesoderm | 1.65e-10 | 315 |
mesoderm-derived structure | 1.65e-10 | 315 |
presumptive mesoderm | 1.65e-10 | 315 |
connective tissue | 2.91e-08 | 371 |