FFCP PHASE1:Hg19::chr10:8106290..8106294,+: Difference between revisions
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|id=chr10:8106290..8106294,+
|short_description=p@chr10:8106290..8106294,+
|description=CAGE_peak_at_chr10:8106290..8106294,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8106290..8106294,+ | |||
|coexpression_cluster_id=C3051 | |||
|description=CAGE_peak_at_chr10:8106290..8106294,+ | |||
|id=chr10:8106290..8106294,+ | |||
|ontology_enrichment_celltype=CL:0000084!5.88e-15!25;CL:0000827!5.88e-15!25;CL:0000791!4.80e-13!18;CL:0000789!4.80e-13!18;CL:0002420!4.80e-13!18;CL:0002419!4.80e-13!18;CL:0000790!4.80e-13!18;CL:0000838!6.24e-12!52;CL:0000542!1.44e-11!53;CL:0000051!1.44e-11!53;CL:0000624!1.54e-10!6;CL:0000080!1.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.69e-17;25!CL:0000624;3.49e-16;6!CL:0000791;2.50e-15;18!CL:0000789;2.50e-15;18!CL:0002419;2.50e-15;18!CL:0000039;4.42e-08;7!CL:0000586;4.42e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.36e-17,25;CL:0000827,2.36e-17,25;CL:0000624,3.24e-16,6;CL:0000791,2.96e-15,18;CL:0000789,2.96e-15,18;CL:0002420,2.96e-15,18;CL:0002419,2.96e-15,18;CL:0000790,2.96e-15,18;CL:0000838,1.97e-09,52;CL:0000542,3.20e-09,53;CL:0000051,3.20e-09,53;CL:0000039,3.73e-08,7;CL:0000586,3.73e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000790;2.50e-15;18!UBERON:0005754;1.69e-07;1!UBERON:0008425;1.69e-07;1!UBERON:0005425;6.11e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.39e-14;4!DOID:1612;4.39e-14;4!DOID:1799;6.11e-07;1!DOID:10165;6.11e-07;1!DOID:1798;6.11e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.91e-14,4;DOID:1612,4.91e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.10e-09!15;UBERON:0000179!1.10e-09!15;UBERON:0000463!1.10e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.56e-09;3!UBERON:0004054;8.56e-09;3!UBERON:0000998;1.69e-07;1!UBERON:0006868;1.69e-07;1!UBERON:0001000;6.11e-07;1!UBERON:0000941;6.11e-07;1!UBERON:0001785;6.11e-07;1!UBERON:0002464;6.11e-07;1!UBERON:0004904;6.11e-07;1!UBERON:0001021;6.11e-07;1!UBERON:0005352;6.11e-07;1!UBERON:0005904;8.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.78e-09,3;UBERON:0004054,7.78e-09,3;UBERON:0000998,1.75e-07,1;UBERON:0006868,1.75e-07,1;UBERON:0001000,5.14e-07,1;UBERON:0005352,5.14e-07,1;UBERON:0000941,6.49e-07,1;UBERON:0001785,6.49e-07,1;UBERON:0002464,6.49e-07,1;UBERON:0004904,6.49e-07,1;UBERON:0001021,6.49e-07,1;UBERON:0003902,6.49e-07,1;UBERON:0005425,6.49e-07,1;UBERON:0005904,7.97e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,2.75107533924415,2.2616164889946,0.167186495390678,0.32592226663359,0.473447805734733,0,3.34231370655521,2.65145316727353,0.443067789167242,0.812411591295047,1.5370958367081,1.56071217071854,1.64437904603676,1.93445012450094,0.579606171470105,0.14828656316206,0.535081656179426,0,0.566546713487831,0.766440987203842,0.68725489096526,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,2.01606743224732,3.4767225451856,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,4.74122638775565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,2.80315847317372,0.77005821767849,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,1.06712765022621,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,1.44876399560722,0,0.95497793895076,1.18785872333055,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,3.76077999983642,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,2.76676685265672,1.70539524378567,2.06430006651815,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0.567515953566836,0,0,0,0.511577485214607,0.862598491173454,0,1.74735421107222,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0,1.10440093535229,0,0,0,0,0,0,0,0,1.39368351112581,0,0.26721740526556,0,0,0,0,0,0,0,0.23806443146374,0.193766729508018,0.744896571550295,0,0.0636471582781649,0.606351566874658,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,2.75107533924415,2.2616164889946,0.167186495390678,0.32592226663359,0.473447805734733,0,3.34231370655521,2.65145316727353,0.443067789167242,0.812411591295047,1.5370958367081,1.56071217071854,1.64437904603676,1.93445012450094,0.579606171470105,0.14828656316206,0.535081656179426,0,0.566546713487831,0.766440987203842,0.68725489096526,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,2.01606743224732,3.4767225451856,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,4.74122638775565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,2.80315847317372,0.77005821767849,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,1.06712765022621,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,1.44876399560722,0,0.95497793895076,1.18785872333055,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,3.76077999983642,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,2.76676685265672,1.70539524378567,2.06430006651815,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0.567515953566836,0,0,0,0.511577485214607,0.862598491173454,0,1.74735421107222,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0,1.10440093535229,0,0,0,0,0,0,0,0,1.39368351112581,0,0.26721740526556,0,0,0,0,0,0,0,0.23806443146374,0.193766729508018,0.744896571550295,0,0.0636471582781649,0.606351566874658,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr10:8106290..8106294,+ | |||
}} | }} |
Latest revision as of 16:00, 23 July 2015
Short description: | p@chr10:8106290..8106294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8106290..8106294, + |
Coexpression cluster: | C3051_MCF7_CD4_CD8_seminal_breast_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.36e-17 | 25 |
pro-T cell | 2.36e-17 | 25 |
CD4-positive, alpha-beta T cell | 3.24e-16 | 6 |
mature alpha-beta T cell | 2.96e-15 | 18 |
alpha-beta T cell | 2.96e-15 | 18 |
immature T cell | 2.96e-15 | 18 |
mature T cell | 2.96e-15 | 18 |
immature alpha-beta T cell | 2.96e-15 | 18 |
lymphoid lineage restricted progenitor cell | 1.97e-09 | 52 |
lymphocyte | 3.20e-09 | 53 |
common lymphoid progenitor | 3.20e-09 | 53 |
germ line cell | 3.73e-08 | 7 |
germ cell | 3.73e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.78e-09 | 3 |
internal male genitalia | 7.78e-09 | 3 |
seminal vesicle | 1.75e-07 | 1 |
seminal fluid secreting gland | 1.75e-07 | 1 |
vas deferens | 5.14e-07 | 1 |
spermatic cord | 5.14e-07 | 1 |
cranial nerve II | 6.49e-07 | 1 |
cranial nerve | 6.49e-07 | 1 |
nerve trunk | 6.49e-07 | 1 |
nerve connecting eye with brain | 6.49e-07 | 1 |
nerve | 6.49e-07 | 1 |
retinal neural layer | 6.49e-07 | 1 |
presumptive neural retina | 6.49e-07 | 1 |
duct of male reproductive system | 7.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.91e-14 | 4 |
breast cancer | 4.91e-14 | 4 |