FFCP PHASE1:Hg19::chr10:81053976..81053980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:81053976..81053980,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:81053976..81053980,- | |description=CAGE_peak_at_chr10:81053976..81053980,- | ||
|id=chr10:81053976..81053980,- | |id=chr10:81053976..81053980,- | ||
|ontology_enrichment_celltype=CL:0002057!4.00e-100!42;CL:0000860!5.04e-93!45;CL:0000766!3.99e-72!76;CL:0002009!1.37e-70!65;CL:0000557!3.77e-64!71;CL:0002194!1.68e-63!63;CL:0000576!1.68e-63!63;CL:0000040!1.68e-63!63;CL:0000559!1.68e-63!63;CL:0000839!1.32e-56!70;CL:0000763!3.32e-53!112;CL:0000049!3.32e-53!112;CL:0000738!5.63e-49!140;CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0002087!4.81e-38!119;CL:0000988!4.68e-36!182;CL:0002031!4.32e-34!124;CL:0002032!6.44e-34!165;CL:0000837!6.44e-34!165;CL:0000134!8.73e-16!358;CL:0000094!2.32e-15!8;CL:0002320!2.45e-15!365;CL:0000842!1.47e-14!3;CL:0000219!9.33e-14!390;CL:0000048!7.31e-12!430;CL:0000723!1.36e-11!436;CL:0000034!3.03e-11!444;CL:0001014!3.51e-11!2;CL:0001016!3.51e-11!2;CL:0000081!4.17e-11!11;CL:0000224!4.70e-11!4;CL:0000080!1.58e-07!6;CL:0000767!1.75e-07!3;CL:0000775!2.20e-07!3;CL:0000063!8.24e-07!578 | |ontology_enrichment_celltype=CL:0002057!4.00e-100!42;CL:0000860!5.04e-93!45;CL:0000766!3.99e-72!76;CL:0002009!1.37e-70!65;CL:0000557!3.77e-64!71;CL:0002194!1.68e-63!63;CL:0000576!1.68e-63!63;CL:0000040!1.68e-63!63;CL:0000559!1.68e-63!63;CL:0000839!1.32e-56!70;CL:0000763!3.32e-53!112;CL:0000049!3.32e-53!112;CL:0000738!5.63e-49!140;CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0002087!4.81e-38!119;CL:0000988!4.68e-36!182;CL:0002031!4.32e-34!124;CL:0002032!6.44e-34!165;CL:0000837!6.44e-34!165;CL:0000134!8.73e-16!358;CL:0000094!2.32e-15!8;CL:0002320!2.45e-15!365;CL:0000842!1.47e-14!3;CL:0000219!9.33e-14!390;CL:0000048!7.31e-12!430;CL:0000723!1.36e-11!436;CL:0000034!3.03e-11!444;CL:0001014!3.51e-11!2;CL:0001016!3.51e-11!2;CL:0000081!4.17e-11!11;CL:0000224!4.70e-11!4;CL:0000080!1.58e-07!6;CL:0000767!1.75e-07!3;CL:0000775!2.20e-07!3;CL:0000063!8.24e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-37;33!CL:0002057;1.21e-37;33!CL:0000473;2.23e-27;39!CL:0000234;2.23e-27;39!CL:0000576;2.40e-26;48!CL:0000766;8.74e-11;69!CL:0001014;1.55e-08;2!CL:0000771;1.55e-08;2!CL:0001016;1.55e-08;2!CL:0000094;4.74e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-39,42;CL:0002057,1.27e-39,42;CL:0000473,1.49e-34,48;CL:0000234,1.49e-34,48;CL:0002009,1.08e-31,61;CL:0000766,1.69e-31,72;CL:0000557,8.36e-29,67;CL:0002194,1.90e-27,59;CL:0000576,1.90e-27,59;CL:0000040,1.90e-27,59;CL:0000559,1.90e-27,59;CL:0000839,1.79e-24,66;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0000738,5.24e-19,136;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0002031,1.11e-15,120;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0002087,1.13e-13,115;CL:0000771,1.39e-08,2;CL:0001014,1.73e-08,2;CL:0001016,1.73e-08,2;CL:0000094,5.00e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.81e-56!80;UBERON:0001474!6.21e-52!86;UBERON:0002390!6.64e-52!102;UBERON:0003061!6.64e-52!102;UBERON:0002193!1.09e-46!112;UBERON:0004765!2.64e-43!101;UBERON:0001434!2.64e-43!101;UBERON:0002405!2.92e-37!115;UBERON:0002204!1.27e-23!167;UBERON:0003081!6.68e-21!216;UBERON:0002384!1.00e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!2.81e-56!80;UBERON:0001474!6.21e-52!86;UBERON:0002390!6.64e-52!102;UBERON:0003061!6.64e-52!102;UBERON:0002193!1.09e-46!112;UBERON:0004765!2.64e-43!101;UBERON:0001434!2.64e-43!101;UBERON:0002405!2.92e-37!115;UBERON:0002204!1.27e-23!167;UBERON:0003081!6.68e-21!216;UBERON:0002384!1.00e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-25,76;UBERON:0001474,2.12e-23,82;UBERON:0004765,3.05e-21,90;UBERON:0002405,1.58e-20,93;UBERON:0002390,1.97e-19,98;UBERON:0003061,1.97e-19,98;UBERON:0001434,5.04e-19,100;UBERON:0002193,1.53e-17,108;UBERON:0002204,6.16e-11,167;UBERON:0003081,9.09e-09,203 | |||
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|short_description=p@chr10:81053976..81053980,- | |short_description=p@chr10:81053976..81053980,- | ||
}} | }} |
Latest revision as of 15:59, 23 July 2015
Short description: | p@chr10:81053976..81053980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:81053976..81053980, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.27e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-39 | 42 |
defensive cell | 1.49e-34 | 48 |
phagocyte | 1.49e-34 | 48 |
macrophage dendritic cell progenitor | 1.08e-31 | 61 |
myeloid leukocyte | 1.69e-31 | 72 |
granulocyte monocyte progenitor cell | 8.36e-29 | 67 |
monopoietic cell | 1.90e-27 | 59 |
monocyte | 1.90e-27 | 59 |
monoblast | 1.90e-27 | 59 |
promonocyte | 1.90e-27 | 59 |
myeloid lineage restricted progenitor cell | 1.79e-24 | 66 |
myeloid cell | 3.32e-24 | 108 |
common myeloid progenitor | 3.32e-24 | 108 |
leukocyte | 5.24e-19 | 136 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 1.11e-15 | 120 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
nongranular leukocyte | 1.13e-13 | 115 |
eosinophil | 1.39e-08 | 2 |
CD1a-positive Langerhans cell | 1.73e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.73e-08 | 2 |
granulocyte | 5.00e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-25 | 76 |
bone element | 2.12e-23 | 82 |
skeletal element | 3.05e-21 | 90 |
immune system | 1.58e-20 | 93 |
hematopoietic system | 1.97e-19 | 98 |
blood island | 1.97e-19 | 98 |
skeletal system | 5.04e-19 | 100 |
hemolymphoid system | 1.53e-17 | 108 |
musculoskeletal system | 6.16e-11 | 167 |
lateral plate mesoderm | 9.09e-09 | 203 |