FFCP PHASE1:Hg19::chr10:79617159..79617171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79617159..79617171,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr10:79617159..79617171,- | |description=CAGE_peak_at_chr10:79617159..79617171,- | ||
|id=chr10:79617159..79617171,- | |id=chr10:79617159..79617171,- | ||
|ontology_enrichment_celltype=CL:0000039!1.61e-14!7;CL:0000586!1.61e-14!7 | |ontology_enrichment_celltype=CL:0000039!1.61e-14!7;CL:0000586!1.61e-14!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.12e-37;7!CL:0000586;7.12e-37;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.57e-37,7;CL:0000586,5.57e-37,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.15e-29;1!UBERON:0005754;1.15e-29;1!UBERON:0007297;1.43e-15;2 | |||
|ontology_enrichment_disease=DOID:1799!5.62e-12!1;DOID:10165!5.62e-12!1;DOID:1798!5.62e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.64e-12;22!DOID:2994;2.64e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.44e-12,22;DOID:2994,2.44e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.95e-32!3;UBERON:0004054!1.95e-32!3;UBERON:0005904!1.64e-24!4;UBERON:0003135!1.50e-15!11;UBERON:0000998!3.27e-12!1;UBERON:0006868!3.27e-12!1;UBERON:0006122!4.53e-12!1;UBERON:0001000!5.05e-12!1;UBERON:0005352!5.05e-12!1;UBERON:0003101!7.60e-12!22;UBERON:0000079!7.60e-12!22;UBERON:0001301!8.64e-12!1;UBERON:0003296!2.25e-11!4;UBERON:0010133!2.25e-11!4;UBERON:0007023!2.06e-09!115;UBERON:0004175!4.62e-07!25;UBERON:0003124!5.84e-07!7;UBERON:0001894!7.19e-07!7;UBERON:0006222!7.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.80e-38;3!UBERON:0004054;1.80e-38;3!UBERON:0000998;1.15e-29;1!UBERON:0006868;1.15e-29;1!UBERON:0001000;2.73e-29;1!UBERON:0005352;2.73e-29;1!UBERON:0005904;3.65e-29;4!UBERON:0000058;2.51e-12;10!UBERON:0003135;2.68e-11;11!UBERON:0001987;1.89e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.64e-38,3;UBERON:0004054,2.64e-38,3;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0001000,4.20e-29,1;UBERON:0005352,4.20e-29,1;UBERON:0005904,4.86e-29,4;UBERON:0003135,2.98e-11,11;UBERON:0004175,6.47e-11,25;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0000058,6.57e-07,19 | |||
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|short_description=p@chr10:79617159..79617171,- | |short_description=p@chr10:79617159..79617171,- | ||
}} | }} |
Latest revision as of 15:49, 23 July 2015
Short description: | p@chr10:79617159..79617171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79617159..79617171, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.57e-37 | 7 |
germ cell | 5.57e-37 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.64e-38 | 3 |
internal male genitalia | 2.64e-38 | 3 |
seminal vesicle | 1.33e-29 | 1 |
seminal fluid secreting gland | 1.33e-29 | 1 |
vas deferens | 4.20e-29 | 1 |
spermatic cord | 4.20e-29 | 1 |
duct of male reproductive system | 4.86e-29 | 4 |
male reproductive organ | 2.98e-11 | 11 |
internal genitalia | 6.47e-11 | 25 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
duct | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.44e-12 | 22 |
germ cell cancer | 2.44e-12 | 22 |