FFCP PHASE1:Hg19::chr10:73534273..73534295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73534273..73534295,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:73534273..73534295,- | |description=CAGE_peak_at_chr10:73534273..73534295,- | ||
|id=chr10:73534273..73534295,- | |id=chr10:73534273..73534295,- | ||
|ontology_enrichment_celltype=CL:0000763!5.50e-32!112;CL:0000049!5.50e-32!112;CL:0000037!1.50e-29!172;CL:0000566!1.50e-29!172;CL:0000988!9.13e-27!182;CL:0002057!1.73e-26!42;CL:0002032!1.17e-25!165;CL:0000837!1.17e-25!165;CL:0000860!4.45e-24!45;CL:0000766!5.97e-24!76;CL:0000738!8.30e-21!140;CL:0002194!7.77e-18!63;CL:0000576!7.77e-18!63;CL:0000040!7.77e-18!63;CL:0000559!7.77e-18!63;CL:0000839!2.50e-17!70;CL:0002009!5.39e-17!65;CL:0002393!2.08e-16!9;CL:0002397!2.08e-16!9;CL:0000557!8.80e-16!71;CL:0002087!1.22e-14!119;CL:0002031!1.05e-11!124;CL:0000094!6.79e-11!8;CL:0000081!1.67e-07!11;CL:0000875!7.95e-07!3;CL:0002396!7.95e-07!3 | |ontology_enrichment_celltype=CL:0000763!5.50e-32!112;CL:0000049!5.50e-32!112;CL:0000037!1.50e-29!172;CL:0000566!1.50e-29!172;CL:0000988!9.13e-27!182;CL:0002057!1.73e-26!42;CL:0002032!1.17e-25!165;CL:0000837!1.17e-25!165;CL:0000860!4.45e-24!45;CL:0000766!5.97e-24!76;CL:0000738!8.30e-21!140;CL:0002194!7.77e-18!63;CL:0000576!7.77e-18!63;CL:0000040!7.77e-18!63;CL:0000559!7.77e-18!63;CL:0000839!2.50e-17!70;CL:0002009!5.39e-17!65;CL:0002393!2.08e-16!9;CL:0002397!2.08e-16!9;CL:0000557!8.80e-16!71;CL:0002087!1.22e-14!119;CL:0002031!1.05e-11!124;CL:0000094!6.79e-11!8;CL:0000081!1.67e-07!11;CL:0000875!7.95e-07!3;CL:0002396!7.95e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.88e-33;8!CL:0000875;4.59e-24;3!CL:0002396;4.59e-24;3!CL:0000081;8.93e-24;11!CL:0000775;3.86e-23;3!CL:0002393;1.46e-20;6!CL:0002397;1.46e-20;6!CL:0000766;4.83e-12;69!CL:0000767;8.46e-11;3!CL:0000576;1.04e-09;48!CL:0000763;1.11e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,5.64e-41,9;CL:0002397,5.64e-41,9;CL:0000094,9.87e-33,8;CL:0000766,1.79e-26,72;CL:0000875,4.60e-24,3;CL:0002396,4.60e-24,3;CL:0000763,7.72e-24,108;CL:0000049,7.72e-24,108;CL:0000081,1.05e-23,11;CL:0000775,3.33e-23,3;CL:0000860,6.63e-20,42;CL:0002057,6.63e-20,42;CL:0000473,3.53e-17,48;CL:0000234,3.53e-17,48;CL:0002032,7.90e-15,161;CL:0000837,7.90e-15,161;CL:0000037,4.64e-14,168;CL:0002194,2.33e-13,59;CL:0000576,2.33e-13,59;CL:0000040,2.33e-13,59;CL:0000559,2.33e-13,59;CL:0000988,3.68e-13,177;CL:0002009,7.24e-13,61;CL:0000738,1.32e-12,136;CL:0000839,9.19e-12,66;CL:0000557,1.46e-11,67;CL:0000767,1.20e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-13;42!CL:0000049;1.50e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!4.68e-08!31;DOID:1240!1.70e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-21!102;UBERON:0003061!1.08e-21!102;UBERON:0002193!9.92e-21!112;UBERON:0007023!4.49e-18!115;UBERON:0002371!6.06e-13!80;UBERON:0000178!2.47e-12!15;UBERON:0000179!2.47e-12!15;UBERON:0000463!2.47e-12!15;UBERON:0001474!2.11e-11!86;UBERON:0001049!2.26e-09!57;UBERON:0005068!2.26e-09!57;UBERON:0006241!2.26e-09!57;UBERON:0007135!2.26e-09!57;UBERON:0004765!3.51e-09!101;UBERON:0001434!3.51e-09!101;UBERON:0002405!4.02e-09!115;UBERON:0002616!7.54e-09!59;UBERON:0002780!3.36e-08!41;UBERON:0001890!3.36e-08!41;UBERON:0006240!3.36e-08!41;UBERON:0001893!4.02e-08!34;UBERON:0002020!5.13e-08!34;UBERON:0003528!5.13e-08!34;UBERON:0003080!6.70e-08!42;UBERON:0002791!2.01e-07!33 | |ontology_enrichment_uberon=UBERON:0002390!1.08e-21!102;UBERON:0003061!1.08e-21!102;UBERON:0002193!9.92e-21!112;UBERON:0007023!4.49e-18!115;UBERON:0002371!6.06e-13!80;UBERON:0000178!2.47e-12!15;UBERON:0000179!2.47e-12!15;UBERON:0000463!2.47e-12!15;UBERON:0001474!2.11e-11!86;UBERON:0001049!2.26e-09!57;UBERON:0005068!2.26e-09!57;UBERON:0006241!2.26e-09!57;UBERON:0007135!2.26e-09!57;UBERON:0004765!3.51e-09!101;UBERON:0001434!3.51e-09!101;UBERON:0002405!4.02e-09!115;UBERON:0002616!7.54e-09!59;UBERON:0002780!3.36e-08!41;UBERON:0001890!3.36e-08!41;UBERON:0006240!3.36e-08!41;UBERON:0001893!4.02e-08!34;UBERON:0002020!5.13e-08!34;UBERON:0003528!5.13e-08!34;UBERON:0003080!6.70e-08!42;UBERON:0002791!2.01e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.44e-12;15!UBERON:0000179;6.44e-12;15!UBERON:0000463;6.44e-12;15!UBERON:0000029;1.42e-08;1!UBERON:0002390;2.86e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.03e-18,108;UBERON:0002390,1.67e-18,98;UBERON:0003061,1.67e-18,98;UBERON:0000178,6.29e-12,15;UBERON:0000179,6.29e-12,15;UBERON:0000463,6.29e-12,15;UBERON:0002405,4.02e-11,93;UBERON:0002371,5.49e-10,76;UBERON:0001474,3.97e-09,82;UBERON:0000029,1.05e-08,1;UBERON:0004765,3.70e-08,90;UBERON:0003081,2.49e-07,203;UBERON:0001434,3.65e-07,100 | |||
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|short_description=p@chr10:73534273..73534295,- | |short_description=p@chr10:73534273..73534295,- | ||
}} | }} |
Latest revision as of 15:16, 23 July 2015
Short description: | p@chr10:73534273..73534295, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73534273..73534295, - |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 5.64e-41 | 9 |
CD14-positive, CD16-positive monocyte | 5.64e-41 | 9 |
granulocyte | 9.87e-33 | 8 |
myeloid leukocyte | 1.79e-26 | 72 |
non-classical monocyte | 4.60e-24 | 3 |
CD14-low, CD16-positive monocyte | 4.60e-24 | 3 |
myeloid cell | 7.72e-24 | 108 |
common myeloid progenitor | 7.72e-24 | 108 |
blood cell | 1.05e-23 | 11 |
neutrophil | 3.33e-23 | 3 |
classical monocyte | 6.63e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.63e-20 | 42 |
defensive cell | 3.53e-17 | 48 |
phagocyte | 3.53e-17 | 48 |
hematopoietic oligopotent progenitor cell | 7.90e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.90e-15 | 161 |
hematopoietic stem cell | 4.64e-14 | 168 |
monopoietic cell | 2.33e-13 | 59 |
monocyte | 2.33e-13 | 59 |
monoblast | 2.33e-13 | 59 |
promonocyte | 2.33e-13 | 59 |
hematopoietic cell | 3.68e-13 | 177 |
macrophage dendritic cell progenitor | 7.24e-13 | 61 |
leukocyte | 1.32e-12 | 136 |
myeloid lineage restricted progenitor cell | 9.19e-12 | 66 |
granulocyte monocyte progenitor cell | 1.46e-11 | 67 |
basophil | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.03e-18 | 108 |
hematopoietic system | 1.67e-18 | 98 |
blood island | 1.67e-18 | 98 |
blood | 6.29e-12 | 15 |
haemolymphatic fluid | 6.29e-12 | 15 |
organism substance | 6.29e-12 | 15 |
immune system | 4.02e-11 | 93 |
bone marrow | 5.49e-10 | 76 |
bone element | 3.97e-09 | 82 |
lymph node | 1.05e-08 | 1 |
skeletal element | 3.70e-08 | 90 |
lateral plate mesoderm | 2.49e-07 | 203 |
skeletal system | 3.65e-07 | 100 |