FFCP PHASE1:Hg19::chr10:70287374..70287409,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:70287374..70287409,+ to FFCP PHASE1:Hg19::chr10:70287374..70287409,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:70287374..70287409,+ | |||
|description=CAGE_peak_at_chr10:70287374..70287409,+ | |||
|id=chr10:70287374..70287409,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.61e-28!140;CL:0000037!1.44e-24!172;CL:0000566!1.44e-24!172;CL:0002031!1.63e-24!124;CL:0002087!2.35e-24!119;CL:0000988!4.51e-23!182;CL:0002032!2.04e-22!165;CL:0000837!2.04e-22!165;CL:0002057!1.87e-17!42;CL:0000860!3.30e-17!45;CL:0000542!1.54e-14!53;CL:0000051!1.54e-14!53;CL:0000838!4.38e-14!52;CL:0000766!2.75e-11!76;CL:0000557!4.92e-11!71;CL:0002009!9.80e-11!65;CL:0000003!1.19e-10!722;CL:0000839!2.89e-10!70;CL:0002194!6.30e-10!63;CL:0000576!6.30e-10!63;CL:0000040!6.30e-10!63;CL:0000559!6.30e-10!63;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112;CL:0000945!1.42e-07!24;CL:0000826!1.42e-07!24;CL:0000791!7.81e-07!18;CL:0000789!7.81e-07!18;CL:0002420!7.81e-07!18;CL:0002419!7.81e-07!18;CL:0000790!7.81e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.72e-18;33!CL:0002057;4.72e-18;33!CL:0000791;5.39e-16;18!CL:0000789;5.39e-16;18!CL:0002419;5.39e-16;18!CL:0000624;5.23e-14;6!CL:0000084;1.07e-12;25!CL:0000473;2.50e-12;39!CL:0000234;2.50e-12;39!CL:0002087;7.05e-12;104!CL:0000576;2.20e-11;48!CL:0000542;1.12e-10;53!CL:0000766;1.71e-08;69!CL:0000738;5.77e-08;136!CL:0000623;8.63e-08;3!CL:0000898;1.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.07e-33,136;CL:0002031,2.29e-30,120;CL:0002087,2.70e-30,115;CL:0000037,3.67e-29,168;CL:0002032,2.30e-28,161;CL:0000837,2.30e-28,161;CL:0000988,7.33e-27,177;CL:0000860,2.00e-22,42;CL:0002057,2.00e-22,42;CL:0000473,9.26e-19,48;CL:0000234,9.26e-19,48;CL:0000542,5.45e-18,53;CL:0000051,5.45e-18,53;CL:0000838,6.14e-17,52;CL:0000791,3.70e-16,18;CL:0000789,3.70e-16,18;CL:0002420,3.70e-16,18;CL:0002419,3.70e-16,18;CL:0000790,3.70e-16,18;CL:0000766,6.75e-15,72;CL:0002009,1.53e-14,61;CL:0000624,2.31e-14,6;CL:0000557,5.41e-14,67;CL:0002194,1.12e-13,59;CL:0000576,1.12e-13,59;CL:0000040,1.12e-13,59;CL:0000559,1.12e-13,59;CL:0000839,7.36e-13,66;CL:0000084,7.88e-13,25;CL:0000827,7.88e-13,25;CL:0000763,7.69e-12,108;CL:0000049,7.69e-12,108;CL:0000134,1.56e-08,354;CL:0000623,3.83e-08,3;CL:0000825,3.83e-08,3;CL:0002320,4.41e-08,361;CL:0000898,5.65e-08,3;CL:0000219,5.99e-07,386;CL:0000034,8.43e-07,441;CL:0000723,8.58e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-16;42!CL:0000790;5.39e-16;18!CL:0000051;1.12e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-11!102;UBERON:0003061!4.04e-11!102;UBERON:0002193!4.59e-10!112;UBERON:0002371!2.75e-09!80;UBERON:0001474!1.61e-08!86;UBERON:0002405!4.17e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-14,98;UBERON:0003061,1.25e-14,98;UBERON:0002193,1.81e-12,108;UBERON:0002371,1.52e-11,76;UBERON:0002405,2.59e-11,93;UBERON:0001474,3.14e-11,82;UBERON:0004765,1.23e-09,90;UBERON:0001434,5.03e-08,100;UBERON:0002384,1.80e-07,371;UBERON:0003081,7.75e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.382067028739756,0.57470412614962,0.472264687882075,0.786728553697808,1.91914699048606,0.928896739896456,0.919421224478927,0.90361775633475,0.739508020333575,0.92960640696362,0.426507697462265,0.293600439334847,0,1.00272223735071,1.95309783644267,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0.727752183563449,1.16214518452842,0.822335776043652,0.929119112685311,1.1507695692886,1.7931249457037,2.36482229888585,0.344745680736619,1.29096936716765,2.70852973188684,1.50593871634084,0.818718450173537,1.79778787556068,1.22433556948361,1.28371610830437,1.91801137739712,0.659702600373432,0.997318288108159,1.27867425159808,1.7412554317715,1.70215567407342,1.24564449799115,1.7587406567972,1.0429658368404,2.17188844705117,0,1.84138817993782,1.89877432464531,0.633765858935825,0.850417199860174,1.67726916406701,0.786300418025466,0.750884464207532,0.16072558669708,0.855038231223746,0.59675003159727,1.82664153764634,1.75996244461323,0.546138611262131,0,2.13365111283254,0.800791974072025,1.72425731986345,0,0.954053754535364,1.1384259382189,0.587237189370939,1.52909291250092,0,1.12101712596307,0,2.75393678159366,2.75107533924415,2.2616164889946,0.334372990781356,2.93330039970231,3.31413464014313,0,0.779873198196215,1.76763544484902,0.443067789167242,0.270803863765016,0.384273959177026,0.650296737799391,0.657751618414705,0.829050053357545,0,1.4828656316206,1.33770414044857,0,0.339928028092699,3.44898444241729,1.71813722741315,1.26509846009751,0,0,0.950452044448374,0.602300476311091,0.255973222308837,1.24930726552346,0,1.64225599384209,2.21767417547206,4.01160293675261,1.30341963494519,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0.26591592103773,0.238490624305342,1.71598473234038,0.74291500265913,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0,0.35576626268671,0.66944122552934,0,1.52054421143703,0.24406205754817,0,0,0.0892997282840798,0,0.337834441449967,3.06633274931766,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0.860509862246441,0.354668382198357,0.560677600142307,3.20246987189115,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0.323745888736263,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0.900273288253207,0,0.515281080091258,0.18611685633159,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,0.286804595389004,0.731842236777572,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0.674156540800822,0.196221465125346,0,0,0,0.8231480226628,0,1.26755034821831,0,0,1.7658523976586,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0.570762456703795,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.352193736052904,0.829312462163088,0.864719720501769,1.8936365013957,0,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,3.47463946379935,1.97030760201927,3.88129634747131,3.08023287071396,0,0,0.773288812777695,0,0,1.49801404789436,0,1.24324654030811,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0.82707210449155,0.431428401637234,0.320182673410333,1.5156378572313,0,0.30239029332968,0.496215615637554,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0,0,0.638063562472921,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.429374660225974,0.372158369359667,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,1.58510321173008,0,0.48763373908959,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,1.12678241012897,0,0.0982490410131212,0,0,0,0,0,0,0.577332676353072,0,0,0.282431402330337,0,0,0.443430153536676,0,2.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| ||
|short_description=p@chr10:70287374..70287409,+ | |||
}} | }} |
Latest revision as of 14:58, 23 July 2015
Short description: | p@chr10:70287374..70287409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70287374..70287409, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-14 | 98 |
blood island | 1.25e-14 | 98 |
hemolymphoid system | 1.81e-12 | 108 |
bone marrow | 1.52e-11 | 76 |
immune system | 2.59e-11 | 93 |
bone element | 3.14e-11 | 82 |
skeletal element | 1.23e-09 | 90 |
skeletal system | 5.03e-08 | 100 |
connective tissue | 1.80e-07 | 371 |
lateral plate mesoderm | 7.75e-07 | 203 |