FFCP PHASE1:Hg19::chr10:6341958..6341963,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:6341958..6341963,+ to FFCP PHASE1:Hg19::chr10:6341958..6341963,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:6341958..6341963,+ | |||
|description=CAGE_peak_at_chr10:6341958..6341963,+ | |||
|id=chr10:6341958..6341963,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.56e-14!42;CL:0000860!7.15e-13!45;CL:0000738!1.42e-12!140;CL:0000766!5.90e-11!76;CL:0000037!1.79e-10!172;CL:0000566!1.79e-10!172;CL:0000988!4.30e-10!182;CL:0002032!4.96e-10!165;CL:0000837!4.96e-10!165;CL:0002087!7.11e-10!119;CL:0002009!3.11e-09!65;CL:0002031!3.28e-09!124;CL:0000763!5.97e-09!112;CL:0000049!5.97e-09!112;CL:0000557!9.30e-09!71;CL:0002194!2.65e-08!63;CL:0000576!2.65e-08!63;CL:0000040!2.65e-08!63;CL:0000559!2.65e-08!63;CL:0000839!1.26e-07!70;CL:0002393!1.34e-07!9;CL:0002397!1.34e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.27e-22;8!CL:0000775;1.05e-21;3!CL:0000081;4.08e-16;11!CL:0000771;1.07e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.21e-22,8;CL:0000775,1.02e-21,3;CL:0000081,4.03e-16,11;CL:0000771,1.07e-15,2;CL:0000766,6.05e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-23!115;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0002390!2.34e-12!102;UBERON:0003061!2.34e-12!102;UBERON:0001017!8.82e-12!82;UBERON:0000955!1.11e-11!69;UBERON:0006238!1.11e-11!69;UBERON:0002616!1.37e-11!59;UBERON:0002780!2.14e-11!41;UBERON:0001890!2.14e-11!41;UBERON:0006240!2.14e-11!41;UBERON:0005743!2.14e-11!86;UBERON:0002193!2.88e-11!112;UBERON:0003080!6.38e-11!42;UBERON:0000073!4.01e-10!94;UBERON:0001016!4.01e-10!94;UBERON:0001893!2.92e-09!34;UBERON:0002791!9.25e-09!33;UBERON:0002346!2.38e-08!90;UBERON:0003075!3.62e-08!86;UBERON:0007284!3.62e-08!86;UBERON:0002020!3.79e-08!34;UBERON:0003528!3.79e-08!34;UBERON:0001869!5.22e-08!32;UBERON:0002371!3.76e-07!80;UBERON:0003056!9.73e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.17e-10;3!UBERON:0005290;5.17e-10;3!UBERON:0002336;3.96e-08;1!UBERON:0011215;3.96e-08;1!UBERON:0001018;3.96e-08;1!UBERON:0002473;3.96e-08;1!UBERON:0005340;3.96e-08;1!UBERON:0003544;3.96e-08;1!UBERON:0005970;3.96e-08;1!UBERON:0002316;3.96e-08;1!UBERON:0001020;3.96e-08;1!UBERON:0002437;3.96e-08;1!UBERON:0000178;1.30e-07;15!UBERON:0000179;1.30e-07;15!UBERON:0000463;1.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.73e-10,3;UBERON:0005290,4.73e-10,3;UBERON:0010096,4.73e-10,3;UBERON:0007023,3.48e-09,114;UBERON:0002336,3.33e-08,1;UBERON:0011215,3.33e-08,1;UBERON:0001018,3.33e-08,1;UBERON:0002473,3.33e-08,1;UBERON:0005340,3.33e-08,1;UBERON:0003544,3.33e-08,1;UBERON:0005970,3.33e-08,1;UBERON:0002316,3.33e-08,1;UBERON:0001020,3.33e-08,1;UBERON:0002437,3.33e-08,1;UBERON:0000178,1.60e-07,15;UBERON:0000179,1.60e-07,15;UBERON:0000463,1.60e-07,15;UBERON:0003076,1.75e-07,15;UBERON:0003057,1.75e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,2.21598163412751,1.40381113229099,0.651032612147555,0.223915474239924,0.32389366601898,0.515151135268373,0.726991193897824,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,0,0,0.689491361473237,0.645484683583826,2.70852973188684,0.188242339542605,0,0,0,0.641858054152187,1.27867425159808,0,0,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.217188844705117,1.81619850790011,0.368277635987565,0,0.845021145247767,0.850417199860174,0.838634582033504,0.561643155732475,0.901061357049038,0.964353520182481,0,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,1.23360899399706,0.334372990781356,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,0.802320587350522,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,1.07813787429759,0.641715181398742,0,0,0.773288812777695,0,0.637938751653163,1.49801404789436,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0,1.29694662238543,0,2.37937552888281,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0.614321404198464,0.994147647766298,0,0,0.329607748453519,0,3.18796781201712,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0.394573622547734,2.3948309234694,0,0,0.463840490809256,3.99227596002388,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0.530745387020035,0,0.296521128680622,0.123563938946503,0.104421949505455,1.55022605855557,0,0.702793337176017,0,0,0,0,0,0,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0,0.426905989478705,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.798716001995964,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.387848869084652,0,0,0,0.533937062838473,0,0.828478110694391,0.496166021811951,0.197611631897944,0,0,0.544017803369474,0.2506898940227,0,1.31149052283922,0,1.77213635993397,0.122026264901963,0.3755727921195,1.72022758707021,0.110929051536852,1.24192805882767,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.321146125482298,0,0,0,0,0.138314504928436,0.322951291263702,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0.150420656698515,0.20170506870352,1.56302802246618,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0.546974809018219,0,0,0,0.383287282918786,0.535701835878287,0,0.606965604236632,0,0,0,0.171488009437418,0.40781839786099,0.263091094251396,0,0.111231401892069,0,0.628462359664008,0,0,0.215927591218621,0.9555033757741,0.500335809236594,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.1026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| ||
|short_description=p@chr10:6341958..6341963,+ | |||
}} | }} |
Latest revision as of 14:33, 23 July 2015
Short description: | p@chr10:6341958..6341963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6341958..6341963, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.21e-22 | 8 |
neutrophil | 1.02e-21 | 3 |
blood cell | 4.03e-16 | 11 |
eosinophil | 1.07e-15 | 2 |
myeloid leukocyte | 6.05e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.73e-10 | 3 |
myelencephalon | 4.73e-10 | 3 |
future myelencephalon | 4.73e-10 | 3 |
adult organism | 3.48e-09 | 114 |
corpus callosum | 3.33e-08 | 1 |
central nervous system cell part cluster | 3.33e-08 | 1 |
axon tract | 3.33e-08 | 1 |
intercerebral commissure | 3.33e-08 | 1 |
dorsal telencephalic commissure | 3.33e-08 | 1 |
brain white matter | 3.33e-08 | 1 |
brain commissure | 3.33e-08 | 1 |
white matter | 3.33e-08 | 1 |
nervous system commissure | 3.33e-08 | 1 |
cerebral hemisphere white matter | 3.33e-08 | 1 |
blood | 1.60e-07 | 15 |
haemolymphatic fluid | 1.60e-07 | 15 |
organism substance | 1.60e-07 | 15 |
posterior neural tube | 1.75e-07 | 15 |
chordal neural plate | 1.75e-07 | 15 |