FFCP PHASE1:Hg19::chr10:62058259..62058298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:62058259..62058298,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr10:62058259..62058298,- | |||
|id=chr10:62058259..62058298,- | |||
|ontology_enrichment_celltype=CL:0000047!5.00e-10!8;CL:0002548!2.15e-08!6;CL:0002195!4.06e-07!2;CL:0002571!4.06e-07!2;CL:1000306!5.28e-07!4;CL:0002547!5.28e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.05e-08;6!CL:0000404;6.05e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.88e-12,8;CL:0000540,6.38e-08,6;CL:0000031,6.38e-08,6;CL:0000404,6.38e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.70e-33;3!UBERON:0010226;1.55e-11;1!UBERON:0004140;1.55e-11;1!CL:0000031;6.05e-08;6 | |||
|ontology_enrichment_disease=DOID:114!1.28e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.47e-19!27;UBERON:0000948!2.09e-13!24;UBERON:0005498!2.09e-13!24;UBERON:0004140!2.09e-13!24;UBERON:0009881!2.09e-13!24;UBERON:0004141!2.09e-13!24;UBERON:0003084!2.09e-13!24;UBERON:0007005!2.09e-13!24;UBERON:0004139!2.09e-13!24;UBERON:0004291!2.09e-13!24;UBERON:0005743!4.73e-10!86;UBERON:0007023!8.34e-10!115;UBERON:0000073!1.19e-08!94;UBERON:0001016!1.19e-08!94;UBERON:0000025!1.26e-08!194;UBERON:0001017!1.79e-08!82;UBERON:0000415!5.28e-07!4;UBERON:0007240!5.28e-07!4;UBERON:0005742!5.28e-07!4;UBERON:0005734!5.28e-07!4;UBERON:0004664!5.28e-07!4;UBERON:0004663!5.28e-07!4;UBERON:0003075!5.42e-07!86;UBERON:0007284!5.42e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.03e-16;6!UBERON:0002135;9.11e-12;1!UBERON:0002084;1.55e-11;1!UBERON:0002082;1.55e-11;1!UBERON:0002680;2.47e-11;9!UBERON:0001895;2.47e-11;9!UBERON:0007100;2.42e-10;25!UBERON:0004733;1.25e-08;12!UBERON:0002028;1.25e-08;12!UBERON:0004732;5.29e-08;13!UBERON:0000948;8.92e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.06e-17,6;UBERON:0006215,9.06e-17,6;UBERON:0002135,1.07e-11,1;UBERON:0002084,1.32e-11,1;UBERON:0002082,1.32e-11,1;UBERON:0010226,1.32e-11,1;UBERON:0002680,2.26e-11,9;UBERON:0001895,2.26e-11,9;UBERON:0010092,2.26e-11,9;UBERON:0007100,1.44e-09,27;UBERON:0001017,3.42e-09,81;UBERON:0004733,1.17e-08,12;UBERON:0002028,1.17e-08,12;UBERON:0007277,1.17e-08,12;UBERON:0001016,3.55e-08,89;UBERON:0004732,4.98e-08,13;UBERON:0010314,5.85e-08,132;UBERON:0003075,3.30e-07,82;UBERON:0007284,3.30e-07,82;UBERON:0000948,3.85e-07,24;UBERON:0005498,3.85e-07,24;UBERON:0004140,3.85e-07,24;UBERON:0009881,3.85e-07,24;UBERON:0004141,3.85e-07,24;UBERON:0003084,3.85e-07,24;UBERON:0007005,3.85e-07,24;UBERON:0004139,3.85e-07,24;UBERON:0004291,3.85e-07,24;UBERON:0003076,5.09e-07,15;UBERON:0003057,5.09e-07,15;UBERON:0002346,7.82e-07,86 | |||
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| ||
|short_description=p@chr10:62058259..62058298,- | |||
}} | }} |
Latest revision as of 14:27, 23 July 2015
Short description: | p@chr10:62058259..62058298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:62058259..62058298, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.88e-12 | 8 |
neuron | 6.38e-08 | 6 |
neuroblast | 6.38e-08 | 6 |
electrically signaling cell | 6.38e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.06e-17 | 6 |
rhombic lip | 9.06e-17 | 6 |
mitral valve | 1.07e-11 | 1 |
heart left ventricle | 1.32e-11 | 1 |
cardiac ventricle | 1.32e-11 | 1 |
future cardiac ventricle | 1.32e-11 | 1 |
regional part of metencephalon | 2.26e-11 | 9 |
metencephalon | 2.26e-11 | 9 |
future metencephalon | 2.26e-11 | 9 |
primary circulatory organ | 1.44e-09 | 27 |
central nervous system | 3.42e-09 | 81 |
segmental subdivision of hindbrain | 1.17e-08 | 12 |
hindbrain | 1.17e-08 | 12 |
presumptive hindbrain | 1.17e-08 | 12 |
nervous system | 3.55e-08 | 89 |
segmental subdivision of nervous system | 4.98e-08 | 13 |
structure with developmental contribution from neural crest | 5.85e-08 | 132 |
neural plate | 3.30e-07 | 82 |
presumptive neural plate | 3.30e-07 | 82 |
heart | 3.85e-07 | 24 |
primitive heart tube | 3.85e-07 | 24 |
primary heart field | 3.85e-07 | 24 |
anterior lateral plate mesoderm | 3.85e-07 | 24 |
heart tube | 3.85e-07 | 24 |
heart primordium | 3.85e-07 | 24 |
cardiac mesoderm | 3.85e-07 | 24 |
cardiogenic plate | 3.85e-07 | 24 |
heart rudiment | 3.85e-07 | 24 |
posterior neural tube | 5.09e-07 | 15 |
chordal neural plate | 5.09e-07 | 15 |
neurectoderm | 7.82e-07 | 86 |