FFCP PHASE1:Hg19::chr10:60026761..60026776,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:60026761..60026776,- | |||
|coexpression_cluster_id=C1317 | |coexpression_cluster_id=C1317 | ||
|description=CAGE_peak_at_chr10:60026761..60026776,- | |description=CAGE_peak_at_chr10:60026761..60026776,- | ||
|id=chr10:60026761..60026776,- | |id=chr10:60026761..60026776,- | ||
|ontology_enrichment_celltype=CL:0000766!4.98e-36!76;CL:0002057!9.36e-36!42;CL:0000860!1.54e-35!45;CL:0000738!1.91e-35!140;CL:0000037!2.83e-29!172;CL:0000566!2.83e-29!172;CL:0002009!5.03e-28!65;CL:0002194!5.07e-27!63;CL:0000576!5.07e-27!63;CL:0000040!5.07e-27!63;CL:0000559!5.07e-27!63;CL:0000557!5.40e-27!71;CL:0000988!5.99e-27!182;CL:0002087!1.23e-26!119;CL:0002393!3.16e-26!9;CL:0002397!3.16e-26!9;CL:0000763!6.96e-26!112;CL:0000049!6.96e-26!112;CL:0000839!1.62e-25!70;CL:0002032!3.57e-25!165;CL:0000837!3.57e-25!165;CL:0002031!1.70e-23!124;CL:0000094!3.94e-13!8;CL:0000875!4.44e-10!3;CL:0002396!4.44e-10!3;CL:0000134!6.08e-10!358;CL:0000767!1.40e-09!3;CL:0002320!1.67e-09!365;CL:0000081!2.59e-09!11;CL:0000842!5.49e-09!3;CL:0000219!5.65e-08!390;CL:0000034!1.25e-07!444;CL:0000048!3.42e-07!430;CL:0000771!3.73e-07!2;CL:0000723!6.44e-07!436;CL:0000224!7.97e-07!4 | |ontology_enrichment_celltype=CL:0000766!4.98e-36!76;CL:0002057!9.36e-36!42;CL:0000860!1.54e-35!45;CL:0000738!1.91e-35!140;CL:0000037!2.83e-29!172;CL:0000566!2.83e-29!172;CL:0002009!5.03e-28!65;CL:0002194!5.07e-27!63;CL:0000576!5.07e-27!63;CL:0000040!5.07e-27!63;CL:0000559!5.07e-27!63;CL:0000557!5.40e-27!71;CL:0000988!5.99e-27!182;CL:0002087!1.23e-26!119;CL:0002393!3.16e-26!9;CL:0002397!3.16e-26!9;CL:0000763!6.96e-26!112;CL:0000049!6.96e-26!112;CL:0000839!1.62e-25!70;CL:0002032!3.57e-25!165;CL:0000837!3.57e-25!165;CL:0002031!1.70e-23!124;CL:0000094!3.94e-13!8;CL:0000875!4.44e-10!3;CL:0002396!4.44e-10!3;CL:0000134!6.08e-10!358;CL:0000767!1.40e-09!3;CL:0002320!1.67e-09!365;CL:0000081!2.59e-09!11;CL:0000842!5.49e-09!3;CL:0000219!5.65e-08!390;CL:0000034!1.25e-07!444;CL:0000048!3.42e-07!430;CL:0000771!3.73e-07!2;CL:0000723!6.44e-07!436;CL:0000224!7.97e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.49e-39;6!CL:0002397;2.49e-39;6!CL:0000094;6.85e-30;8!CL:0000875;1.41e-29;3!CL:0002396;1.41e-29;3!CL:0000081;9.68e-22;11!CL:0000771;3.17e-20;2!CL:0000576;1.54e-18;48!CL:0000766;1.56e-18;69!CL:0000767;9.29e-14;3!CL:0000226;1.24e-13;3!CL:0000842;1.24e-13;3!CL:0000738;6.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.70e-67,9;CL:0002397,4.70e-67,9;CL:0000766,4.60e-35,72;CL:0000860,1.03e-30,42;CL:0002057,1.03e-30,42;CL:0000875,6.80e-30,3;CL:0002396,6.80e-30,3;CL:0000094,8.98e-30,8;CL:0000473,1.19e-26,48;CL:0000234,1.19e-26,48;CL:0000738,6.32e-25,136;CL:0000763,1.21e-22,108;CL:0000049,1.21e-22,108;CL:0000081,1.18e-21,11;CL:0002194,5.89e-21,59;CL:0000576,5.89e-21,59;CL:0000040,5.89e-21,59;CL:0000559,5.89e-21,59;CL:0002009,3.20e-20,61;CL:0000771,3.67e-20,2;CL:0000037,1.12e-19,168;CL:0000839,1.42e-18,66;CL:0000988,1.54e-18,177;CL:0000557,2.83e-18,67;CL:0002032,2.50e-16,161;CL:0000837,2.50e-16,161;CL:0002087,5.28e-16,115;CL:0000767,1.09e-13,3;CL:0000226,1.93e-13,3;CL:0000842,1.93e-13,3;CL:0002031,3.33e-11,120;CL:0000134,8.43e-08,354;CL:0002320,1.37e-07,361;CL:0000219,7.66e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-20;42!CL:0000049;9.80e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-25!102;UBERON:0003061!1.12e-25!102;UBERON:0002371!7.24e-25!80;UBERON:0001474!1.48e-22!86;UBERON:0002193!1.59e-22!112;UBERON:0004765!2.44e-19!101;UBERON:0001434!2.44e-19!101;UBERON:0002405!8.15e-15!115;UBERON:0002204!4.00e-10!167;UBERON:0003081!2.35e-09!216;UBERON:0002384!6.56e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-25!102;UBERON:0003061!1.12e-25!102;UBERON:0002371!7.24e-25!80;UBERON:0001474!1.48e-22!86;UBERON:0002193!1.59e-22!112;UBERON:0004765!2.44e-19!101;UBERON:0001434!2.44e-19!101;UBERON:0002405!8.15e-15!115;UBERON:0002204!4.00e-10!167;UBERON:0003081!2.35e-09!216;UBERON:0002384!6.56e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.38e-19,98;UBERON:0003061,3.38e-19,98;UBERON:0002193,3.22e-17,108;UBERON:0002371,6.40e-16,76;UBERON:0001474,1.24e-14,82;UBERON:0004765,3.51e-13,90;UBERON:0002405,1.06e-12,93;UBERON:0001434,1.09e-11,100;UBERON:0003081,4.63e-08,203;UBERON:0002384,2.67e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,0.802177789880567,1.51907609501096,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,2.5350634357433,1.91343869968539,4.61249020118427,1.79725809834392,1.80212271409808,2.08943262706204,2.85012743741249,2.78483348078726,2.55729815270488,0,0,0,0.426730222566507,0,0,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,0,0,0,2.48649308061621,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,0.802177789880567,1.51907609501096,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,2.5350634357433,1.91343869968539,4.61249020118427,1.79725809834392,1.80212271409808,2.08943262706204,2.85012743741249,2.78483348078726,2.55729815270488,0,0,0,0.426730222566507,0,0,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,0,0,0,2.48649308061621,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:60026761..60026776,- | |short_description=p@chr10:60026761..60026776,- | ||
}} | }} |
Latest revision as of 14:17, 23 July 2015
Short description: | p@chr10:60026761..60026776, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:60026761..60026776, - |
Coexpression cluster: | C1317_Eosinophils_CD14CD16_CD14_Neutrophils_Basophils_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.38e-19 | 98 |
blood island | 3.38e-19 | 98 |
hemolymphoid system | 3.22e-17 | 108 |
bone marrow | 6.40e-16 | 76 |
bone element | 1.24e-14 | 82 |
skeletal element | 3.51e-13 | 90 |
immune system | 1.06e-12 | 93 |
skeletal system | 1.09e-11 | 100 |
lateral plate mesoderm | 4.63e-08 | 203 |
connective tissue | 2.67e-07 | 371 |