FFCP PHASE1:Hg19::chr10:54214914..54214924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=107bp_to_ENST00000435813,uc001jjs.2_5end | |association_with_transcript=107bp_to_ENST00000435813,uc001jjs.2_5end | ||
|cluster_id=chr10:54214914..54214924,- | |||
|coexpression_cluster_id=C1315 | |coexpression_cluster_id=C1315 | ||
|description=CAGE_peak_6_at_ENST00000435813_5end,CAGE_peak_6_at_uc001jjs.2_5end | |description=CAGE_peak_6_at_ENST00000435813_5end,CAGE_peak_6_at_uc001jjs.2_5end | ||
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|ontology_enrichment_celltype=CL:0002231!1.21e-15!3;CL:0002076!1.77e-12!43;CL:0000223!4.35e-12!59;CL:0000243!4.93e-11!15;CL:0000125!4.93e-11!15;CL:0000030!4.93e-11!15;CL:0000339!4.93e-11!15;CL:0000095!8.36e-10!17;CL:0000123!8.36e-10!17;CL:0002251!1.43e-08!21;CL:0002573!3.68e-08!2;CL:0000066!3.14e-07!254 | |ontology_enrichment_celltype=CL:0002231!1.21e-15!3;CL:0002076!1.77e-12!43;CL:0000223!4.35e-12!59;CL:0000243!4.93e-11!15;CL:0000125!4.93e-11!15;CL:0000030!4.93e-11!15;CL:0000339!4.93e-11!15;CL:0000095!8.36e-10!17;CL:0000123!8.36e-10!17;CL:0002251!1.43e-08!21;CL:0002573!3.68e-08!2;CL:0000066!3.14e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000243;4.47e-27;15!CL:0000125;4.47e-27;15!CL:0000095;2.68e-24;17!CL:0002319;2.76e-17;25!CL:0002573;1.14e-10;2 | |ontology_enrichment_celltype_v019=CL:0000243;4.47e-27;15!CL:0000125;4.47e-27;15!CL:0000095;2.68e-24;17!CL:0002319;2.76e-17;25!CL:0002573;1.14e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.63e-27,15;CL:0000125,4.63e-27,15;CL:0000030,4.63e-27,15;CL:0000339,4.63e-27,15;CL:0000095,2.77e-24,17;CL:0000123,2.77e-24,17;CL:0002319,2.82e-17,25;CL:0000333,4.77e-11,41;CL:0002573,1.20e-10,2;CL:0000133,6.40e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000339;4.47e-27;15!UBERON:0006238;6.11e-24;10 | |ontology_enrichment_development_v019=CL:0000339;4.47e-27;15!UBERON:0006238;6.11e-24;10 | ||
|ontology_enrichment_disease=DOID:1749!1.74e-17!14;DOID:4074!4.26e-11!2;DOID:4905!4.26e-11!2;DOID:3498!4.26e-11!2;DOID:305!2.33e-10!106;DOID:14566!4.41e-10!239;DOID:7!2.50e-09!39;DOID:162!1.95e-08!235;DOID:0050687!8.91e-08!143;DOID:3093!1.74e-07!11;DOID:299!4.89e-07!25 | |ontology_enrichment_disease=DOID:1749!1.74e-17!14;DOID:4074!4.26e-11!2;DOID:4905!4.26e-11!2;DOID:3498!4.26e-11!2;DOID:305!2.33e-10!106;DOID:14566!4.41e-10!239;DOID:7!2.50e-09!39;DOID:162!1.95e-08!235;DOID:0050687!8.91e-08!143;DOID:3093!1.74e-07!11;DOID:299!4.89e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3093;5.10e-22;11 | |ontology_enrichment_disease_v019=DOID:3093;5.10e-22;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,5.10e-22,11 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.28e-21!4;UBERON:0004785!1.28e-21!4;UBERON:0000344!7.36e-21!12;UBERON:0003729!2.49e-17!5;UBERON:0000974!1.03e-08!10;UBERON:0000161!3.30e-08!35;UBERON:0002367!2.08e-07!11;UBERON:0010147!2.08e-07!11;UBERON:0009846!2.08e-07!11;UBERON:0003353!2.08e-07!11;UBERON:0004902!2.08e-07!11;UBERON:0003820!2.08e-07!11;UBERON:0009847!2.08e-07!11;UBERON:0003937!8.50e-07!12;UBERON:0005399!8.50e-07!12 | |ontology_enrichment_uberon=UBERON:0003343!1.28e-21!4;UBERON:0004785!1.28e-21!4;UBERON:0000344!7.36e-21!12;UBERON:0003729!2.49e-17!5;UBERON:0000974!1.03e-08!10;UBERON:0000161!3.30e-08!35;UBERON:0002367!2.08e-07!11;UBERON:0010147!2.08e-07!11;UBERON:0009846!2.08e-07!11;UBERON:0003353!2.08e-07!11;UBERON:0004902!2.08e-07!11;UBERON:0003820!2.08e-07!11;UBERON:0009847!2.08e-07!11;UBERON:0003937!8.50e-07!12;UBERON:0005399!8.50e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;9.43e-11;3!UBERON:0001235;9.43e-11;3!UBERON:0006858;9.43e-11;3!UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002369;9.43e-11;3!UBERON:0001235;9.43e-11;3!UBERON:0006858;9.43e-11;3!UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.90e-11,3;UBERON:0001235,9.90e-11,3;UBERON:0006858,9.90e-11,3 | |||
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|short_description=p6@ENST00000435813,p6@uc001jjs.2 | |short_description=p6@ENST00000435813,p6@uc001jjs.2 | ||
}} | }} |
Latest revision as of 14:10, 23 July 2015
Short description: | p6@ENST00000435813, p6@uc001jjs.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000435813_5end, CAGE_peak_6_at_uc001jjs.2_5end |
Coexpression cluster: | C1315_mucinous_astrocytoma_malignant_glioblastoma_oral_gastric_medulloblastoma |
Association with transcript: | 107bp_to_ENST00000435813, uc001jjs.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.63e-27 | 15 |
glial cell | 4.63e-27 | 15 |
glioblast | 4.63e-27 | 15 |
glioblast (sensu Vertebrata) | 4.63e-27 | 15 |
neuron associated cell | 2.77e-24 | 17 |
neuron associated cell (sensu Vertebrata) | 2.77e-24 | 17 |
neural cell | 2.82e-17 | 25 |
migratory neural crest cell | 4.77e-11 | 41 |
Schwann cell | 1.20e-10 | 2 |
neurectodermal cell | 6.40e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.90e-11 | 3 |
adrenal cortex | 9.90e-11 | 3 |
adrenal/interrenal gland | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.10e-22 | 11 |