FFCP PHASE1:Hg19::chr10:52176592..52176598,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:52176592..52176598,-
|short_description=p@chr10:52176592..52176598,-
|description=CAGE_peak_at_chr10:52176592..52176598,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:52176592..52176598,- | |||
|description=CAGE_peak_at_chr10:52176592..52176598,- | |||
|id=chr10:52176592..52176598,- | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-26!140;CL:0002031!3.75e-26!124;CL:0002057!3.63e-25!42;CL:0000860!6.13e-25!45;CL:0002087!2.36e-24!119;CL:0000839!7.27e-24!70;CL:0000766!1.81e-23!76;CL:0000557!3.35e-23!71;CL:0002009!1.24e-22!65;CL:0002194!2.13e-21!63;CL:0000576!2.13e-21!63;CL:0000040!2.13e-21!63;CL:0000559!2.13e-21!63;CL:0000037!4.82e-21!172;CL:0000566!4.82e-21!172;CL:0002032!5.25e-21!165;CL:0000837!5.25e-21!165;CL:0000988!8.62e-20!182;CL:0000763!5.04e-17!112;CL:0000049!5.04e-17!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-42;33!CL:0002057;1.82e-42;33!CL:0000473;1.85e-33;39!CL:0000234;1.85e-33;39!CL:0000576;7.56e-33;48!CL:0000766;5.65e-22;69!CL:0002087;2.84e-13;104!CL:0000763;1.03e-10;100!CL:0000738;2.46e-10;136!CL:0000988;2.07e-07;177!CL:0002619;9.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.75e-51,42;CL:0002057,3.75e-51,42;CL:0000473,3.72e-49,48;CL:0000234,3.72e-49,48;CL:0002009,1.12e-47,61;CL:0000839,3.65e-47,66;CL:0000557,1.13e-46,67;CL:0000766,9.63e-45,72;CL:0002194,2.48e-44,59;CL:0000576,2.48e-44,59;CL:0000040,2.48e-44,59;CL:0000559,2.48e-44,59;CL:0002031,7.32e-39,120;CL:0000738,3.86e-37,136;CL:0002087,1.40e-34,115;CL:0000763,1.54e-31,108;CL:0000049,1.54e-31,108;CL:0000988,1.25e-30,177;CL:0000037,2.72e-29,168;CL:0002032,1.04e-28,161;CL:0000837,1.04e-28,161;CL:0000134,5.70e-08,354;CL:0002320,1.60e-07,361;CL:0002619,6.10e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-37;42!CL:0000049;1.72e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.91e-22!102;UBERON:0003061!9.91e-22!102;UBERON:0002193!5.12e-20!112;UBERON:0002371!7.58e-20!80;UBERON:0001474!6.49e-19!86;UBERON:0002405!2.06e-14!115;UBERON:0004765!5.66e-14!101;UBERON:0001434!5.66e-14!101;UBERON:0007023!7.52e-08!115;UBERON:0001049!3.24e-07!57;UBERON:0005068!3.24e-07!57;UBERON:0006241!3.24e-07!57;UBERON:0007135!3.24e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-41,76;UBERON:0002390,1.45e-41,98;UBERON:0003061,1.45e-41,98;UBERON:0001474,1.36e-37,82;UBERON:0002193,2.52e-36,108;UBERON:0002405,1.96e-33,93;UBERON:0004765,4.38e-33,90;UBERON:0001434,1.80e-28,100;UBERON:0003081,4.25e-15,203;UBERON:0002204,1.32e-13,167;UBERON:0002384,6.40e-07,371 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0.458480434487708,0.57470412614962,0.472264687882075,0.786728553697808,1.91914699048606,0.154816123316076,0,0,0,0.46480320348181,1.13735385989937,0.293600439334847,8.86392653651004,7.2196001089251,6.94434786290726,2.91090116511902,1.94336199611388,2.31818010870768,2.61716829803216,0.755751887377619,0.485168122375632,3.71886459049095,1.23350366406548,5.26500830521676,5.17846306179871,3.07392847834921,1.6553756092201,10.3423704220986,8.39130088658974,4.06279459783025,3.9530891303947,2.45615535052061,2.24723484445085,14.0798590490615,2.88836124368484,3.19668562899521,1.9791078011203,2.99195486432448,0.852449501065388,7.83564944297177,1.13477044938228,3.73693349397345,4.77372463987812,6.77927793946262,2.6062661364614,4.84319602106695,2.94622108790052,3.16462387440884,0.422510572623884,1.27562579979026,0.838634582033504,0.561643155732475,1.95229960693958,2.4108838004562,0.570025487482497,0.39783335439818,1.27864907635244,1.75996244461323,2.18455444504853,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0.786839080455332,2.35806457649499,1.02800749499755,0,0,0.946895611469467,1.94826728407911,0.557052284425868,8.24896540929544,7.75368631042674,7.31170432165542,1.0247305578054,1.69077151827842,0.164437904603676,0.552700035571697,0.289803085735052,0.741432815810302,0.535081656179426,0,0.453237370790265,0.383220493601921,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.947109008176067,0.821127996921047,0.604820229674197,0.267440195783507,1.15859523106239,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,0.286836620748814,0,0,0,0,0,0.134710672069688,0.653847612453835,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,1.35021065793013,0,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0,4.43190610957315,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,1.15295962733569,1.2624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,1.50677127429638,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.112085143993527,0.394061520403854,0.862510299438069,1.66845947163673,0,0,0,0,0,1.49801404789436,5.9832291840805,0.828831026872071,0,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,1.03384013061444,3.23571301227925,0.960548020230999,0,0,0.30239029332968,0.248107807818777,0.920771839728375,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0.34444334449382,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,2.19259876645935,1.0457418040996,0,0,0,0.9273691048295,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.614014698904518,0.413509717453592,0.751941714077915,0.290033387828457,0.255679882248303,0,0,0.384380134730212,1.65896526242959,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,1.2655176988749,0,0,0,0.318203247925937,0,0.539617372749944,0.54907405947211,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,1.29694662238543,0,0.79312517629427,0,0.962479855263359,0.245040215981032,0.743212700502875,0.144269212976445,0.142283686696828,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,2.22886768554957,0,0.95497793895076,0.296964680832639,0,0,0.844016498463076,0.111308705022906,0.16480387422676,0,0.398495976502139,0.552567831062295,0.251932747854276,0.306806047506464,0.738508832766417,0,0.269605053441981,0.716084698702437,0,0.197286811273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| ||
|short_description=p@chr10:52176592..52176598,- | |||
}} | }} |
Latest revision as of 14:05, 23 July 2015
Short description: | p@chr10:52176592..52176598, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52176592..52176598, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.75e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.75e-51 | 42 |
defensive cell | 3.72e-49 | 48 |
phagocyte | 3.72e-49 | 48 |
macrophage dendritic cell progenitor | 1.12e-47 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-47 | 66 |
granulocyte monocyte progenitor cell | 1.13e-46 | 67 |
myeloid leukocyte | 9.63e-45 | 72 |
monopoietic cell | 2.48e-44 | 59 |
monocyte | 2.48e-44 | 59 |
monoblast | 2.48e-44 | 59 |
promonocyte | 2.48e-44 | 59 |
hematopoietic lineage restricted progenitor cell | 7.32e-39 | 120 |
leukocyte | 3.86e-37 | 136 |
nongranular leukocyte | 1.40e-34 | 115 |
myeloid cell | 1.54e-31 | 108 |
common myeloid progenitor | 1.54e-31 | 108 |
hematopoietic cell | 1.25e-30 | 177 |
hematopoietic stem cell | 2.72e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.04e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-28 | 161 |
mesenchymal cell | 5.70e-08 | 354 |
connective tissue cell | 1.60e-07 | 361 |
adult endothelial progenitor cell | 6.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-41 | 76 |
hematopoietic system | 1.45e-41 | 98 |
blood island | 1.45e-41 | 98 |
bone element | 1.36e-37 | 82 |
hemolymphoid system | 2.52e-36 | 108 |
immune system | 1.96e-33 | 93 |
skeletal element | 4.38e-33 | 90 |
skeletal system | 1.80e-28 | 100 |
lateral plate mesoderm | 4.25e-15 | 203 |
musculoskeletal system | 1.32e-13 | 167 |
connective tissue | 6.40e-07 | 371 |