FFCP PHASE1:Hg19::chr10:5122300..5122307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5122300..5122307,+ | |||
|description=CAGE_peak_at_chr10:5122300..5122307,+ | |description=CAGE_peak_at_chr10:5122300..5122307,+ | ||
|id=chr10:5122300..5122307,+ | |id=chr10:5122300..5122307,+ | ||
|ontology_enrichment_celltype=CL:0000223!7.62e-14!59;CL:0000181!3.20e-12!12;CL:0000417!3.20e-12!12;CL:0000668!3.20e-12!12;CL:0000414!3.20e-12!12;CL:0000412!3.20e-12!12;CL:0000182!3.20e-12!12;CL:0002553!1.43e-10!1;CL:0002563!3.16e-10!4;CL:0000066!1.42e-07!254;CL:0002076!3.32e-07!43;CL:0002149!5.93e-07!6;CL:0002255!5.93e-07!6 | |ontology_enrichment_celltype=CL:0000223!7.62e-14!59;CL:0000181!3.20e-12!12;CL:0000417!3.20e-12!12;CL:0000668!3.20e-12!12;CL:0000414!3.20e-12!12;CL:0000412!3.20e-12!12;CL:0000182!3.20e-12!12;CL:0002553!1.43e-10!1;CL:0002563!3.16e-10!4;CL:0000066!1.42e-07!254;CL:0002076!3.32e-07!43;CL:0002149!5.93e-07!6;CL:0002255!5.93e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.81e-09;3!CL:0002563;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.81e-09,3;CL:0002563,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.93e-14;30!UBERON:0009497;1.22e-08;13 | |||
|ontology_enrichment_disease=DOID:305!2.28e-12!106;DOID:0050619!7.40e-11!1;DOID:1357!7.40e-11!1;DOID:0050615!1.35e-09!16;DOID:0050687!1.31e-08!143;DOID:3001!5.93e-07!6 | |ontology_enrichment_disease=DOID:305!2.28e-12!106;DOID:0050619!7.40e-11!1;DOID:1357!7.40e-11!1;DOID:0050615!1.35e-09!16;DOID:0050687!1.31e-08!143;DOID:3001!5.93e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.78e-26;1!DOID:1357;2.78e-26;1!DOID:0050615;9.86e-15;16!DOID:1324;1.29e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.78e-26,1;DOID:1357,2.78e-26,1;DOID:0050615,1.01e-14,16;DOID:1324,1.31e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.06e-14!82;UBERON:0009497!1.20e-12!25;UBERON:0000015!1.20e-12!25;UBERON:0002423!1.20e-12!25;UBERON:0006235!1.20e-12!25;UBERON:0004161!1.20e-12!25;UBERON:0003929!2.16e-12!54;UBERON:0004921!2.24e-11!129;UBERON:0004185!2.24e-11!129;UBERON:0000077!2.39e-11!130;UBERON:0001764!7.40e-11!1;UBERON:0001825!7.40e-11!1;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0001242!3.16e-10!4;UBERON:0001262!3.16e-10!4;UBERON:0004786!3.16e-10!4;UBERON:0004808!3.16e-10!4;UBERON:0001277!3.16e-10!4;UBERON:0008835!3.31e-10!22;UBERON:0003894!3.31e-10!22;UBERON:0005177!3.31e-10!107;UBERON:0000466!4.69e-10!126;UBERON:0009854!9.32e-10!23;UBERON:0004119!1.58e-09!169;UBERON:0000925!1.58e-09!169;UBERON:0006595!1.58e-09!169;UBERON:0007499!5.78e-09!25;UBERON:0009856!1.30e-08!26;UBERON:0003350!2.36e-08!5;UBERON:0001041!8.70e-08!98;UBERON:0002107!8.77e-08!19;UBERON:0006925!8.77e-08!19;UBERON:0008836!8.77e-08!19;UBERON:0002100!6.21e-07!216 | |ontology_enrichment_uberon=UBERON:0005911!4.06e-14!82;UBERON:0009497!1.20e-12!25;UBERON:0000015!1.20e-12!25;UBERON:0002423!1.20e-12!25;UBERON:0006235!1.20e-12!25;UBERON:0004161!1.20e-12!25;UBERON:0003929!2.16e-12!54;UBERON:0004921!2.24e-11!129;UBERON:0004185!2.24e-11!129;UBERON:0000077!2.39e-11!130;UBERON:0001764!7.40e-11!1;UBERON:0001825!7.40e-11!1;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0001242!3.16e-10!4;UBERON:0001262!3.16e-10!4;UBERON:0004786!3.16e-10!4;UBERON:0004808!3.16e-10!4;UBERON:0001277!3.16e-10!4;UBERON:0008835!3.31e-10!22;UBERON:0003894!3.31e-10!22;UBERON:0005177!3.31e-10!107;UBERON:0000466!4.69e-10!126;UBERON:0009854!9.32e-10!23;UBERON:0004119!1.58e-09!169;UBERON:0000925!1.58e-09!169;UBERON:0006595!1.58e-09!169;UBERON:0007499!5.78e-09!25;UBERON:0009856!1.30e-08!26;UBERON:0003350!2.36e-08!5;UBERON:0001041!8.70e-08!98;UBERON:0002107!8.77e-08!19;UBERON:0006925!8.77e-08!19;UBERON:0008836!8.77e-08!19;UBERON:0002100!6.21e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.78e-26;1!UBERON:0001825;2.78e-26;1!UBERON:0002394;1.54e-07;4!UBERON:0003928;1.54e-07;4!UBERON:0001242;1.75e-07;4!UBERON:0001262;1.75e-07;4!UBERON:0004786;1.75e-07;4!UBERON:0004808;1.75e-07;4!UBERON:0001277;1.75e-07;4!UBERON:0001708;2.04e-07;4!UBERON:0008895;2.04e-07;4!UBERON:0005911;5.96e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.78e-26,1;UBERON:0001825,2.78e-26,1;UBERON:0005911,8.19e-08,82;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4;UBERON:0001708,2.04e-07,4;UBERON:0008895,2.04e-07,4 | |||
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|short_description=p@chr10:5122300..5122307,+ | |short_description=p@chr10:5122300..5122307,+ | ||
}} | }} |
Latest revision as of 14:02, 23 July 2015
Short description: | p@chr10:5122300..5122307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5122300..5122307, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.81e-09 | 3 |
intestinal epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.78e-26 | 1 |
paranasal sinus | 2.78e-26 | 1 |
endo-epithelium | 8.19e-08 | 82 |
intestinal mucosa | 1.69e-07 | 4 |
wall of intestine | 1.69e-07 | 4 |
gastrointestinal system mucosa | 1.69e-07 | 4 |
gastrointestinal system epithelium | 1.69e-07 | 4 |
intestinal epithelium | 1.69e-07 | 4 |
jaw skeleton | 2.04e-07 | 4 |
splanchnocranium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.78e-26 | 1 |
maxillary sinus cancer | 2.78e-26 | 1 |
respiratory system cancer | 1.01e-14 | 16 |
lung cancer | 1.31e-07 | 15 |