FFCP PHASE1:Hg19::chr10:48601574..48601591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:48601574..48601591,- | |||
|description=CAGE_peak_at_chr10:48601574..48601591,- | |description=CAGE_peak_at_chr10:48601574..48601591,- | ||
|id=chr10:48601574..48601591,- | |id=chr10:48601574..48601591,- | ||
|ontology_enrichment_celltype=CL:0000055!8.53e-32!180;CL:0000057!8.05e-19!75;CL:0000192!4.25e-15!42;CL:0000514!4.25e-15!42;CL:0000187!1.25e-13!54;CL:0000359!1.38e-13!32;CL:0002334!1.92e-13!12;CL:0000680!2.23e-12!57;CL:0000056!2.23e-12!57;CL:0000355!2.23e-12!57;CL:0000393!4.94e-12!60;CL:0000211!4.94e-12!60;CL:0000183!1.27e-11!59;CL:0000548!1.05e-09!679;CL:0000004!1.05e-09!679;CL:0000255!1.05e-09!679;CL:0000012!1.87e-09!682;CL:0000144!5.40e-09!625;CL:0000048!9.93e-09!430;CL:0000243!2.03e-08!15;CL:0000125!2.03e-08!15;CL:0000030!2.03e-08!15;CL:0000339!2.03e-08!15;CL:0002620!2.08e-08!23;CL:0002494!2.78e-08!16;CL:0000723!3.31e-08!436;CL:0000034!1.53e-07!444;CL:0002371!2.40e-07!591;CL:0000095!3.62e-07!17;CL:0000123!3.62e-07!17;CL:0000128!6.06e-07!7;CL:0000126!6.06e-07!7;CL:0000127!6.06e-07!7;CL:0002453!6.06e-07!7 | |ontology_enrichment_celltype=CL:0000055!8.53e-32!180;CL:0000057!8.05e-19!75;CL:0000192!4.25e-15!42;CL:0000514!4.25e-15!42;CL:0000187!1.25e-13!54;CL:0000359!1.38e-13!32;CL:0002334!1.92e-13!12;CL:0000680!2.23e-12!57;CL:0000056!2.23e-12!57;CL:0000355!2.23e-12!57;CL:0000393!4.94e-12!60;CL:0000211!4.94e-12!60;CL:0000183!1.27e-11!59;CL:0000548!1.05e-09!679;CL:0000004!1.05e-09!679;CL:0000255!1.05e-09!679;CL:0000012!1.87e-09!682;CL:0000144!5.40e-09!625;CL:0000048!9.93e-09!430;CL:0000243!2.03e-08!15;CL:0000125!2.03e-08!15;CL:0000030!2.03e-08!15;CL:0000339!2.03e-08!15;CL:0002620!2.08e-08!23;CL:0002494!2.78e-08!16;CL:0000723!3.31e-08!436;CL:0000034!1.53e-07!444;CL:0002371!2.40e-07!591;CL:0000095!3.62e-07!17;CL:0000123!3.62e-07!17;CL:0000128!6.06e-07!7;CL:0000126!6.06e-07!7;CL:0000127!6.06e-07!7;CL:0002453!6.06e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.27e-16;12!CL:0000359;1.11e-08;32!CL:0002580;1.26e-07;3!CL:0002579;4.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.00e-16,12;CL:0000057,3.69e-12,76;CL:0000359,4.79e-09,32;CL:0000192,7.57e-08,43;CL:0000514,7.57e-08,43;CL:0002580,1.30e-07,3;CL:0002579,4.05e-07,3;CL:0000187,4.71e-07,55;CL:0002539,7.24e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.39e-09!14;DOID:3093!4.31e-07!11 | |ontology_enrichment_disease=DOID:2394!5.39e-09!14;DOID:3093!4.31e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.89e-13;14!DOID:3093;1.40e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-12,14;DOID:3093,1.29e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.44e-12!42;UBERON:0003509!3.44e-12!42;UBERON:0004572!3.44e-12!42;UBERON:0004872!2.00e-11!84;UBERON:0001134!6.40e-11!61;UBERON:0002036!6.40e-11!61;UBERON:0003082!6.40e-11!61;UBERON:0002385!2.87e-10!63;UBERON:0001015!2.87e-10!63;UBERON:0000383!2.87e-10!63;UBERON:0004573!1.96e-09!33;UBERON:0004571!1.96e-09!33;UBERON:0001981!1.63e-08!60;UBERON:0007500!1.63e-08!60;UBERON:0004537!1.63e-08!60;UBERON:0006965!1.63e-08!60;UBERON:0004290!2.53e-08!70;UBERON:0004535!2.57e-08!110;UBERON:0003914!3.98e-08!118;UBERON:0002049!4.70e-08!79;UBERON:0007798!4.70e-08!79;UBERON:0001009!8.64e-08!113;UBERON:0000486!5.54e-07!82 | |ontology_enrichment_uberon=UBERON:0001637!3.44e-12!42;UBERON:0003509!3.44e-12!42;UBERON:0004572!3.44e-12!42;UBERON:0004872!2.00e-11!84;UBERON:0001134!6.40e-11!61;UBERON:0002036!6.40e-11!61;UBERON:0003082!6.40e-11!61;UBERON:0002385!2.87e-10!63;UBERON:0001015!2.87e-10!63;UBERON:0000383!2.87e-10!63;UBERON:0004573!1.96e-09!33;UBERON:0004571!1.96e-09!33;UBERON:0001981!1.63e-08!60;UBERON:0007500!1.63e-08!60;UBERON:0004537!1.63e-08!60;UBERON:0006965!1.63e-08!60;UBERON:0004290!2.53e-08!70;UBERON:0004535!2.57e-08!110;UBERON:0003914!3.98e-08!118;UBERON:0002049!4.70e-08!79;UBERON:0007798!4.70e-08!79;UBERON:0001009!8.64e-08!113;UBERON:0000486!5.54e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.65e-08;6!UBERON:0002358;3.65e-08;6!UBERON:0003684;3.65e-08;6!UBERON:0001178;3.65e-08;6!UBERON:0001135;4.58e-07;15!UBERON:0004573;9.67e-07;33!UBERON:0004571;9.67e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.28e-09,42;UBERON:0003509,1.28e-09,42;UBERON:0004572,1.28e-09,42;UBERON:0003688,5.11e-08,6;UBERON:0002358,5.11e-08,6;UBERON:0003684,5.11e-08,6;UBERON:0001178,5.11e-08,6;UBERON:0004573,1.42e-07,33;UBERON:0004571,1.42e-07,33;UBERON:0001135,3.47e-07,15;UBERON:0004237,7.24e-07,10;UBERON:0004695,7.24e-07,10;UBERON:0002111,7.24e-07,10;UBERON:0004178,7.24e-07,10;UBERON:0004872,8.42e-07,83 | |||
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| ||
|short_description=p@chr10:48601574..48601591,- | |short_description=p@chr10:48601574..48601591,- | ||
}} | }} |
Latest revision as of 13:54, 23 July 2015
Short description: | p@chr10:48601574..48601591, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:48601574..48601591, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.00e-16 | 12 |
fibroblast | 3.69e-12 | 76 |
vascular associated smooth muscle cell | 4.79e-09 | 32 |
smooth muscle cell | 7.57e-08 | 43 |
smooth muscle myoblast | 7.57e-08 | 43 |
preadipocyte of the breast | 1.30e-07 | 3 |
omentum preadipocyte | 4.05e-07 | 3 |
muscle cell | 4.71e-07 | 55 |
aortic smooth muscle cell | 7.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
artery | 1.28e-09 | 42 |
arterial blood vessel | 1.28e-09 | 42 |
arterial system | 1.28e-09 | 42 |
omentum | 5.11e-08 | 6 |
peritoneum | 5.11e-08 | 6 |
abdominal cavity | 5.11e-08 | 6 |
visceral peritoneum | 5.11e-08 | 6 |
systemic artery | 1.42e-07 | 33 |
systemic arterial system | 1.42e-07 | 33 |
smooth muscle tissue | 3.47e-07 | 15 |
blood vessel smooth muscle | 7.24e-07 | 10 |
arterial system smooth muscle | 7.24e-07 | 10 |
artery smooth muscle tissue | 7.24e-07 | 10 |
aorta smooth muscle tissue | 7.24e-07 | 10 |
splanchnic layer of lateral plate mesoderm | 8.42e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-12 | 14 |
nervous system cancer | 1.29e-07 | 11 |