FFCP PHASE1:Hg19::chr10:4556662..4556692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4556662..4556692,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:4556662..4556692,- | |description=CAGE_peak_at_chr10:4556662..4556692,- | ||
|id=chr10:4556662..4556692,- | |id=chr10:4556662..4556692,- | ||
|ontology_enrichment_celltype=CL:0002057!4.02e-57!42;CL:0000860!1.01e-52!45;CL:0002194!2.10e-42!63;CL:0000576!2.10e-42!63;CL:0000040!2.10e-42!63;CL:0000559!2.10e-42!63;CL:0002009!7.86e-41!65;CL:0000766!2.17e-38!76;CL:0000839!2.75e-37!70;CL:0000557!1.23e-36!71;CL:0002087!2.54e-24!119;CL:0000763!4.95e-23!112;CL:0000049!4.95e-23!112;CL:0000738!6.48e-22!140;CL:0002031!6.72e-20!124;CL:0000037!6.08e-16!172;CL:0000566!6.08e-16!172;CL:0000988!1.49e-15!182;CL:0002032!9.75e-15!165;CL:0000837!9.75e-15!165 | |ontology_enrichment_celltype=CL:0002057!4.02e-57!42;CL:0000860!1.01e-52!45;CL:0002194!2.10e-42!63;CL:0000576!2.10e-42!63;CL:0000040!2.10e-42!63;CL:0000559!2.10e-42!63;CL:0002009!7.86e-41!65;CL:0000766!2.17e-38!76;CL:0000839!2.75e-37!70;CL:0000557!1.23e-36!71;CL:0002087!2.54e-24!119;CL:0000763!4.95e-23!112;CL:0000049!4.95e-23!112;CL:0000738!6.48e-22!140;CL:0002031!6.72e-20!124;CL:0000037!6.08e-16!172;CL:0000566!6.08e-16!172;CL:0000988!1.49e-15!182;CL:0002032!9.75e-15!165;CL:0000837!9.75e-15!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.94e-55;33!CL:0002057;2.94e-55;33!CL:0000473;4.97e-43;39!CL:0000234;4.97e-43;39!CL:0000576;4.07e-25;48!CL:0000766;4.45e-14;69!CL:0000226;2.19e-13;3!CL:0000842;2.19e-13;3!CL:0002087;2.31e-13;104!CL:0000763;1.07e-12;100!CL:0000738;5.29e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.52e-49,42;CL:0002057,6.52e-49,42;CL:0000473,2.08e-48,48;CL:0000234,2.08e-48,48;CL:0002194,2.95e-38,59;CL:0000576,2.95e-38,59;CL:0000040,2.95e-38,59;CL:0000559,2.95e-38,59;CL:0002009,6.03e-37,61;CL:0000766,3.76e-35,72;CL:0000839,5.20e-34,66;CL:0000557,1.78e-33,67;CL:0002087,7.57e-27,115;CL:0000738,6.06e-25,136;CL:0000763,1.06e-22,108;CL:0000049,1.06e-22,108;CL:0002031,3.61e-20,120;CL:0000037,1.08e-19,168;CL:0000988,1.49e-18,177;CL:0002032,2.43e-16,161;CL:0000837,2.43e-16,161;CL:0000226,1.93e-13,3;CL:0000842,1.93e-13,3;CL:0000134,8.29e-08,354;CL:0002320,1.35e-07,361;CL:0000219,7.54e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-35;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;1.15e-10;1!DOID:0070004;1.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.77e-10,1;DOID:0070004,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.61e-34!80;UBERON:0001474!8.53e-31!86;UBERON:0002390!3.18e-28!102;UBERON:0003061!3.18e-28!102;UBERON:0002193!3.84e-28!112;UBERON:0004765!7.31e-25!101;UBERON:0001434!7.31e-25!101;UBERON:0002405!1.06e-23!115;UBERON:0002204!2.60e-14!167;UBERON:0003081!1.22e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.70e-33,76;UBERON:0002390,6.43e-32,98;UBERON:0003061,6.43e-32,98;UBERON:0001474,1.40e-30,82;UBERON:0002193,9.59e-29,108;UBERON:0004765,1.14e-27,90;UBERON:0002405,1.05e-26,93;UBERON:0001434,1.12e-24,100;UBERON:0003081,4.64e-14,203;UBERON:0002204,8.79e-14,167;UBERON:0000926,5.03e-08,315;UBERON:0004120,5.03e-08,315;UBERON:0006603,5.03e-08,315;UBERON:0002384,2.63e-07,371 | |||
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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0,1.39457422143411,0.822335776043652,1.23882548358041,2.01384674625505,0.768482119587302,3.07426898855161,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,5.50951006267625,3.20929027076094,3.83602275479425,1.31940520074686,0.398927315243264,0.852449501065388,10.7377418292576,3.97169657283798,11.2108004819203,0.75374599577023,0,0.868755378820466,6.05399502633369,14.362827803515,29.7474644194431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,1.50999940573032,1.28073069364133,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:4556662..4556692,- | |short_description=p@chr10:4556662..4556692,- | ||
}} | }} |
Latest revision as of 13:49, 23 July 2015
Short description: | p@chr10:4556662..4556692, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4556662..4556692, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.52e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-49 | 42 |
defensive cell | 2.08e-48 | 48 |
phagocyte | 2.08e-48 | 48 |
monopoietic cell | 2.95e-38 | 59 |
monocyte | 2.95e-38 | 59 |
monoblast | 2.95e-38 | 59 |
promonocyte | 2.95e-38 | 59 |
macrophage dendritic cell progenitor | 6.03e-37 | 61 |
myeloid leukocyte | 3.76e-35 | 72 |
myeloid lineage restricted progenitor cell | 5.20e-34 | 66 |
granulocyte monocyte progenitor cell | 1.78e-33 | 67 |
nongranular leukocyte | 7.57e-27 | 115 |
leukocyte | 6.06e-25 | 136 |
myeloid cell | 1.06e-22 | 108 |
common myeloid progenitor | 1.06e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 3.61e-20 | 120 |
hematopoietic stem cell | 1.08e-19 | 168 |
hematopoietic cell | 1.49e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.43e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-16 | 161 |
single nucleate cell | 1.93e-13 | 3 |
mononuclear cell | 1.93e-13 | 3 |
mesenchymal cell | 8.29e-08 | 354 |
connective tissue cell | 1.35e-07 | 361 |
motile cell | 7.54e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.70e-33 | 76 |
hematopoietic system | 6.43e-32 | 98 |
blood island | 6.43e-32 | 98 |
bone element | 1.40e-30 | 82 |
hemolymphoid system | 9.59e-29 | 108 |
skeletal element | 1.14e-27 | 90 |
immune system | 1.05e-26 | 93 |
skeletal system | 1.12e-24 | 100 |
lateral plate mesoderm | 4.64e-14 | 203 |
musculoskeletal system | 8.79e-14 | 167 |
mesoderm | 5.03e-08 | 315 |
mesoderm-derived structure | 5.03e-08 | 315 |
presumptive mesoderm | 5.03e-08 | 315 |
connective tissue | 2.63e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.77e-10 | 1 |
myeloma | 1.77e-10 | 1 |