FFCP PHASE1:Hg19::chr10:3845786..3845804,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:3845786..3845804,+ | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr10:3845786..3845804,+ | |||
|id=chr10:3845786..3845804,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-52!42;CL:0000860!3.80e-48!45;CL:0000738!8.05e-42!140;CL:0000766!2.82e-37!76;CL:0000557!4.79e-37!71;CL:0002009!4.23e-34!65;CL:0000839!1.24e-33!70;CL:0000037!6.46e-33!172;CL:0000566!6.46e-33!172;CL:0002031!2.22e-32!124;CL:0002194!2.06e-31!63;CL:0000576!2.06e-31!63;CL:0000040!2.06e-31!63;CL:0000559!2.06e-31!63;CL:0000988!7.25e-31!182;CL:0002087!2.94e-30!119;CL:0002032!3.89e-29!165;CL:0000837!3.89e-29!165;CL:0000763!6.03e-29!112;CL:0000049!6.03e-29!112;CL:0000134!2.37e-18!358;CL:0002320!1.82e-17!365;CL:0000219!4.93e-16!390;CL:0000048!1.22e-12!430;CL:0000034!1.88e-12!444;CL:0000723!4.33e-12!436;CL:0002393!9.66e-11!9;CL:0002397!9.66e-11!9;CL:0000453!1.01e-08!5;CL:0000063!1.28e-08!578;CL:0002371!1.71e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-39;33!CL:0002057;4.63e-39;33!CL:0000473;1.32e-26;39!CL:0000234;1.32e-26;39!CL:0000576;2.61e-26;48!CL:0000766;3.01e-19;69!CL:0002393;8.11e-17;6!CL:0002397;8.11e-17;6!CL:0002087;5.79e-15;104!CL:0000623;1.48e-13;3!CL:0000767;3.15e-13;3!CL:0000453;3.37e-13;5!CL:0000738;1.09e-09;136!CL:0001014;1.25e-09;2!CL:0001016;1.25e-09;2!CL:0000763;1.58e-09;100!CL:0000451;7.99e-09;10!CL:0000990;2.41e-07;8!CL:0000988;4.88e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.01e-52,42;CL:0002057,3.01e-52,42;CL:0000738,1.76e-51,136;CL:0000473,6.35e-45,48;CL:0000234,6.35e-45,48;CL:0000557,8.63e-42,67;CL:0000766,2.00e-41,72;CL:0000037,6.86e-40,168;CL:0002009,8.37e-40,61;CL:0002031,1.98e-38,120;CL:0000988,2.23e-37,177;CL:0000839,4.65e-36,66;CL:0002032,6.49e-36,161;CL:0000837,6.49e-36,161;CL:0002087,2.13e-35,115;CL:0002194,1.13e-34,59;CL:0000576,1.13e-34,59;CL:0000040,1.13e-34,59;CL:0000559,1.13e-34,59;CL:0000763,5.48e-34,108;CL:0000049,5.48e-34,108;CL:0000134,9.35e-16,354;CL:0002320,2.96e-15,361;CL:0000623,1.54e-13,3;CL:0000825,1.54e-13,3;CL:0000219,1.72e-13,386;CL:0000453,2.84e-13,5;CL:0000767,3.22e-13,3;CL:0000034,1.79e-11,441;CL:0000048,2.48e-11,427;CL:0002393,3.29e-11,9;CL:0002397,3.29e-11,9;CL:0000723,4.92e-11,433;CL:0001014,1.25e-09,2;CL:0001016,1.25e-09,2;CL:0000451,8.07e-09,10;CL:0000990,2.20e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-40;42!CL:0000049;4.07e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.72e-34!80;UBERON:0001474!6.07e-32!86;UBERON:0004765!1.85e-28!101;UBERON:0001434!1.85e-28!101;UBERON:0002390!1.88e-27!102;UBERON:0003061!1.88e-27!102;UBERON:0002193!1.58e-23!112;UBERON:0002405!6.01e-21!115;UBERON:0002384!3.54e-18!375;UBERON:0002204!1.75e-13!167;UBERON:0003081!1.72e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.64e-36,76;UBERON:0001474,6.25e-33,82;UBERON:0002390,9.42e-31,98;UBERON:0003061,9.42e-31,98;UBERON:0004765,2.11e-29,90;UBERON:0002405,3.10e-28,93;UBERON:0002193,3.11e-27,108;UBERON:0001434,8.83e-26,100;UBERON:0002384,1.43e-14,371;UBERON:0002204,1.05e-12,167;UBERON:0003081,4.14e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04737836752479,5.75744097145819,8.97933515233241,0,0,0,0,0,0.293600439334847,18.8358438900838,12.4337557431488,15.6247826915413,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,1.16214518452842,0,1.54853185447552,1.1507695692886,2.0492856522328,2.12834006899727,5.5159308917859,6.45484683583826,4.06279459783025,0.941211697713023,0.818718450173537,1.79778787556068,5.81559395504715,5.77672248736969,10.8687311385837,0.989553900560148,1.19678194572979,0.852449501065388,3.77272010217159,1.13477044938228,0.622822248995575,0.502497330513487,1.0429658368404,2.82345498116652,1.21079900526674,2.94622108790052,4.43047342417238,0.633765858935825,1.27562579979026,1.88692780957538,0.561643155732475,0.901061357049038,0.64290234678832,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,2.80254281490768,0,0.590129310341499,1.57204305099666,1.23360899399706,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.602300476311091,0,0,0,0,2.01606743224732,2.40696176205157,1.30341963494519,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,1.0126579934476,0.292311015483596,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,2.69526550203004,2.88239906833923,0.50496973370552,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4426302907021,14.0157923658686,14.6311061358913,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,2.55722532125772,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,3.15614493394321,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,10.798746794472,17.7974449548328,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,2.79016164658062,1.30852315404675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,1.07963795609311,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0.93061915699296,4.77769469488717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr10:3845786..3845804,+ | |||
}} |
Latest revision as of 13:34, 23 July 2015
Short description: | p@chr10:3845786..3845804, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3845786..3845804, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.64e-36 | 76 |
bone element | 6.25e-33 | 82 |
hematopoietic system | 9.42e-31 | 98 |
blood island | 9.42e-31 | 98 |
skeletal element | 2.11e-29 | 90 |
immune system | 3.10e-28 | 93 |
hemolymphoid system | 3.11e-27 | 108 |
skeletal system | 8.83e-26 | 100 |
connective tissue | 1.43e-14 | 371 |
musculoskeletal system | 1.05e-12 | 167 |
lateral plate mesoderm | 4.14e-11 | 203 |