FFCP PHASE1:Hg19::chr10:3821469..3821544,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:3821469..3821544,- to FFCP PHASE1:Hg19::chr10:3821469..3821544,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3821469..3821544,- | |||
|coexpression_cluster_id=C721 | |||
|description=CAGE_peak_at_chr10:3821469..3821544,- | |||
|id=chr10:3821469..3821544,- | |||
|ontology_enrichment_celltype=CL:0002057!7.75e-20!42;CL:0000860!6.26e-17!45;CL:0000766!1.43e-15!76;CL:0002009!4.42e-12!65;CL:0000738!4.82e-12!140;CL:0000557!5.11e-12!71;CL:0002194!3.04e-11!63;CL:0000576!3.04e-11!63;CL:0000040!3.04e-11!63;CL:0000559!3.04e-11!63;CL:0000839!5.57e-11!70;CL:0002087!1.09e-07!119;CL:0002031!1.20e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-18;33!CL:0002057;1.76e-18;33!CL:0000473;2.33e-14;39!CL:0000234;2.33e-14;39!CL:0000766;1.88e-12;69!CL:0000576;1.90e-12;48!CL:0000094;4.09e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.86e-25,42;CL:0002057,2.86e-25,42;CL:0000473,1.48e-23,48;CL:0000234,1.48e-23,48;CL:0000766,7.18e-23,72;CL:0000557,2.82e-18,67;CL:0002009,5.31e-18,61;CL:0002194,7.80e-17,59;CL:0000576,7.80e-17,59;CL:0000040,7.80e-17,59;CL:0000559,7.80e-17,59;CL:0000738,1.37e-16,136;CL:0000839,1.44e-16,66;CL:0000763,2.11e-11,108;CL:0000049,2.11e-11,108;CL:0002031,6.05e-11,120;CL:0002087,8.37e-11,115;CL:0000037,2.33e-08,168;CL:0002032,3.83e-08,161;CL:0000837,3.83e-08,161;CL:0000094,2.59e-07,8;CL:0000988,2.73e-07,177;CL:0000134,3.65e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-12!102;UBERON:0003061!1.19e-12!102;UBERON:0002371!2.14e-11!80;UBERON:0002193!2.49e-11!112;UBERON:0001474!6.76e-10!86;UBERON:0004765!9.36e-10!101;UBERON:0001434!9.36e-10!101;UBERON:0003081!3.75e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.26e-17,76;UBERON:0002390,3.85e-17,98;UBERON:0003061,3.85e-17,98;UBERON:0002193,8.57e-16,108;UBERON:0001474,2.67e-15,82;UBERON:0004765,2.10e-13,90;UBERON:0001434,3.58e-13,100;UBERON:0002405,1.04e-12,93;UBERON:0003081,3.81e-10,203;UBERON:0002204,1.09e-07,167;UBERON:0000926,2.21e-07,315;UBERON:0004120,2.21e-07,315;UBERON:0006603,2.21e-07,315;UBERON:0002384,7.88e-07,371 | |||
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| ||
|short_description=p@chr10:3821469..3821544,- | |||
}} | }} |
Latest revision as of 13:30, 23 July 2015
Short description: | p@chr10:3821469..3821544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3821469..3821544, - |
Coexpression cluster: | C721_CD4_CD14_Neutrophils_Natural_CD8_CD19_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.86e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.86e-25 | 42 |
defensive cell | 1.48e-23 | 48 |
phagocyte | 1.48e-23 | 48 |
myeloid leukocyte | 7.18e-23 | 72 |
granulocyte monocyte progenitor cell | 2.82e-18 | 67 |
macrophage dendritic cell progenitor | 5.31e-18 | 61 |
monopoietic cell | 7.80e-17 | 59 |
monocyte | 7.80e-17 | 59 |
monoblast | 7.80e-17 | 59 |
promonocyte | 7.80e-17 | 59 |
leukocyte | 1.37e-16 | 136 |
myeloid lineage restricted progenitor cell | 1.44e-16 | 66 |
myeloid cell | 2.11e-11 | 108 |
common myeloid progenitor | 2.11e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 6.05e-11 | 120 |
nongranular leukocyte | 8.37e-11 | 115 |
hematopoietic stem cell | 2.33e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.83e-08 | 161 |
granulocyte | 2.59e-07 | 8 |
hematopoietic cell | 2.73e-07 | 177 |
mesenchymal cell | 3.65e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.26e-17 | 76 |
hematopoietic system | 3.85e-17 | 98 |
blood island | 3.85e-17 | 98 |
hemolymphoid system | 8.57e-16 | 108 |
bone element | 2.67e-15 | 82 |
skeletal element | 2.10e-13 | 90 |
skeletal system | 3.58e-13 | 100 |
immune system | 1.04e-12 | 93 |
lateral plate mesoderm | 3.81e-10 | 203 |
musculoskeletal system | 1.09e-07 | 167 |
mesoderm | 2.21e-07 | 315 |
mesoderm-derived structure | 2.21e-07 | 315 |
presumptive mesoderm | 2.21e-07 | 315 |
connective tissue | 7.88e-07 | 371 |