FFCP PHASE1:Hg19::chr10:3509841..3509862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3509841..3509862,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:3509841..3509862,+ | |description=CAGE_peak_at_chr10:3509841..3509862,+ | ||
|id=chr10:3509841..3509862,+ | |id=chr10:3509841..3509862,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.16e-18!65;CL:0002057!1.53e-17!42;CL:0002194!3.61e-17!63;CL:0000576!3.61e-17!63;CL:0000040!3.61e-17!63;CL:0000559!3.61e-17!63;CL:0000860!1.65e-16!45;CL:0000766!3.58e-16!76;CL:0000557!8.25e-16!71;CL:0000839!4.82e-14!70;CL:0000763!7.54e-14!112;CL:0000049!7.54e-14!112;CL:0000738!5.54e-07!140 | |ontology_enrichment_celltype=CL:0002009!1.16e-18!65;CL:0002057!1.53e-17!42;CL:0002194!3.61e-17!63;CL:0000576!3.61e-17!63;CL:0000040!3.61e-17!63;CL:0000559!3.61e-17!63;CL:0000860!1.65e-16!45;CL:0000766!3.58e-16!76;CL:0000557!8.25e-16!71;CL:0000839!4.82e-14!70;CL:0000763!7.54e-14!112;CL:0000049!7.54e-14!112;CL:0000738!5.54e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.36e-21;5!CL:0000775;1.51e-21;3!CL:0000860;1.41e-20;33!CL:0002057;1.41e-20;33!CL:0000990;2.07e-18;8!CL:0000451;4.89e-15;10!CL:0000473;8.42e-15;39!CL:0000234;8.42e-15;39!CL:0000576;1.03e-08;48!CL:0000094;2.14e-08;8!CL:0000766;3.26e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.11e-21,5;CL:0000775,1.12e-21,3;CL:0000763,1.20e-20,108;CL:0000049,1.20e-20,108;CL:0000990,2.10e-18,8;CL:0000766,9.17e-18,72;CL:0000860,2.86e-17,42;CL:0002057,2.86e-17,42;CL:0002009,1.03e-15,61;CL:0000451,4.93e-15,10;CL:0000473,7.25e-15,48;CL:0000234,7.25e-15,48;CL:0000557,4.13e-14,67;CL:0000738,6.32e-14,136;CL:0002194,9.16e-14,59;CL:0000576,9.16e-14,59;CL:0000040,9.16e-14,59;CL:0000559,9.16e-14,59;CL:0002032,1.34e-12,161;CL:0000837,1.34e-12,161;CL:0000839,4.28e-12,66;CL:0000037,6.52e-12,168;CL:0000988,4.13e-11,177;CL:0000094,1.92e-08,8;CL:0002031,7.22e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-13;42!CL:0000049;5.16e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;5.03e-08;1!DOID:10165;5.03e-08;1!DOID:1798;5.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.14e-07,1;DOID:10165,1.14e-07,1;DOID:1798,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.26e-17!112;UBERON:0002390!3.99e-17!102;UBERON:0003061!3.99e-17!102;UBERON:0002371!4.95e-15!80;UBERON:0001474!5.19e-15!86;UBERON:0004765!3.46e-13!101;UBERON:0001434!3.46e-13!101;UBERON:0002405!8.44e-13!115;UBERON:0003081!1.47e-07!216 | |ontology_enrichment_uberon=UBERON:0002193!1.26e-17!112;UBERON:0002390!3.99e-17!102;UBERON:0003061!3.99e-17!102;UBERON:0002371!4.95e-15!80;UBERON:0001474!5.19e-15!86;UBERON:0004765!3.46e-13!101;UBERON:0001434!3.46e-13!101;UBERON:0002405!8.44e-13!115;UBERON:0003081!1.47e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.66e-07;15!UBERON:0000179;2.66e-07;15!UBERON:0000463;2.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.58e-16,98;UBERON:0003061,3.58e-16,98;UBERON:0002193,2.23e-14,108;UBERON:0002371,3.58e-12,76;UBERON:0001474,4.08e-11,82;UBERON:0004765,6.35e-10,90;UBERON:0002405,1.58e-09,93;UBERON:0001434,1.06e-08,100;UBERON:0000178,1.94e-07,15;UBERON:0000179,1.94e-07,15;UBERON:0000463,1.94e-07,15;UBERON:0003081,4.45e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.515151135268373,0.581592955118259,0,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.863077176966451,1.0246428261164,0.236482229888585,1.72372840368309,1.29096936716765,0,0.564727018627814,0.545812300115692,0.674170453335254,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,1.19678194572979,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,1.50749199154046,1.5644487552606,1.3031330682307,1.81619850790011,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,1.19662164466979,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0.80823028409406,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.738651018262192,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0.771622122786426,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,8.28831026872071,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.429680979473094,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0,1.64544909234478,0.648473311192717,1.62009431171434,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,1.12318871245384,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0.852408440419239,0,0.593929361665277,0,0,1.1253553312841,0,0.16480387422676,0,0,0,0,0,0,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0,0,0,0.174919999992391,2.17499872630438,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0.728341138602278,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.193978032976839,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0.458146384663663,0,0,0,0,0.135904206073614,0.313808538937,0,0.577901179803038,0,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0.0846733320657845,0,0.272406812223151,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0.496166021811951,0.592834895693833,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0.694567422971502,0,0,0,0.219284049578707,0,0,0,1.28120759293973,0,0,0,1.16916185303633,1.59437808376036,1.14495775979091,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,1.04762677792569,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0.39261693422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| ||
|short_description=p@chr10:3509841..3509862,+ | |short_description=p@chr10:3509841..3509862,+ | ||
}} | }} |
Latest revision as of 13:24, 23 July 2015
Short description: | p@chr10:3509841..3509862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3509841..3509862, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.11e-21 | 5 |
neutrophil | 1.12e-21 | 3 |
myeloid cell | 1.20e-20 | 108 |
common myeloid progenitor | 1.20e-20 | 108 |
conventional dendritic cell | 2.10e-18 | 8 |
myeloid leukocyte | 9.17e-18 | 72 |
classical monocyte | 2.86e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.86e-17 | 42 |
macrophage dendritic cell progenitor | 1.03e-15 | 61 |
dendritic cell | 4.93e-15 | 10 |
defensive cell | 7.25e-15 | 48 |
phagocyte | 7.25e-15 | 48 |
granulocyte monocyte progenitor cell | 4.13e-14 | 67 |
leukocyte | 6.32e-14 | 136 |
monopoietic cell | 9.16e-14 | 59 |
monocyte | 9.16e-14 | 59 |
monoblast | 9.16e-14 | 59 |
promonocyte | 9.16e-14 | 59 |
hematopoietic oligopotent progenitor cell | 1.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-12 | 161 |
myeloid lineage restricted progenitor cell | 4.28e-12 | 66 |
hematopoietic stem cell | 6.52e-12 | 168 |
hematopoietic cell | 4.13e-11 | 177 |
granulocyte | 1.92e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 7.22e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.58e-16 | 98 |
blood island | 3.58e-16 | 98 |
hemolymphoid system | 2.23e-14 | 108 |
bone marrow | 3.58e-12 | 76 |
bone element | 4.08e-11 | 82 |
skeletal element | 6.35e-10 | 90 |
immune system | 1.58e-09 | 93 |
skeletal system | 1.06e-08 | 100 |
blood | 1.94e-07 | 15 |
haemolymphatic fluid | 1.94e-07 | 15 |
organism substance | 1.94e-07 | 15 |
lateral plate mesoderm | 4.45e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.14e-07 | 1 |
endocrine pancreas cancer | 1.14e-07 | 1 |
pancreatic endocrine carcinoma | 1.14e-07 | 1 |