FFCP PHASE1:Hg19::chr10:34987954..34987974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:34987954..34987974,- | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_at_chr10:34987954..34987974,- | |description=CAGE_peak_at_chr10:34987954..34987974,- | ||
|id=chr10:34987954..34987974,- | |id=chr10:34987954..34987974,- | ||
|ontology_enrichment_celltype=CL:0000319;1.78e-29;1!CL:0000159;1.78e-15;2!CL:0002549;2.55e-15;2 | |ontology_enrichment_celltype=CL:1000497!1.09e-11!18;CL:0002518!1.09e-11!18;CL:0000159!1.53e-10!2;CL:0000066!7.29e-10!254;CL:1000449!8.78e-10!16;CL:1000507!2.34e-09!12;CL:1000494!2.34e-09!12;CL:0002681!1.28e-08!13;CL:0002584!1.28e-08!13;CL:0000239!7.60e-07!3;CL:1000615!7.60e-07!3;CL:0002306!7.60e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000319;1.78e-29;1!CL:0000159;1.78e-15;2!CL:0002549;2.55e-15;2 | ||
|ontology_enrichment_disease=DOID:3030;1.78e-29;1!DOID:299;1.50e-18;25!DOID:4468;2.55e-15;2!DOID:5093;2.26e-08;4!DOID:1612;2.26e-08;4 | |ontology_enrichment_celltype_v019_2=CL:0000319,1.78e-29,1;CL:0000159,1.78e-15,2;CL:0002549,2.37e-15,2 | ||
|ontology_enrichment_uberon=UBERON:0005629;2.55e-15;2!UBERON:0005358;2.55e-15;2!UBERON:0001886;2.55e-15;2!UBERON:0004086;2.55e-15;2!UBERON:0005282;2.55e-15;2!UBERON:0005281;2.55e-15;2!UBERON:0005284;6.58e-07;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!8.95e-11!4;DOID:1612!8.95e-11!4;DOID:299!1.75e-10!25;DOID:4468!5.03e-10!2;DOID:305!3.34e-07!106;DOID:0050687!6.17e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.78e-29;1!DOID:299;1.50e-18;25!DOID:4468;2.55e-15;2!DOID:5093;2.26e-08;4!DOID:1612;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.78e-29,1;DOID:299,1.50e-18,25;DOID:4468,2.74e-15,2;DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4;DOID:0050687,2.39e-07,143;DOID:305,5.56e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.90e-12!27;UBERON:0003918!3.90e-12!27;UBERON:0005095!3.90e-12!27;UBERON:0007687!3.90e-12!27;UBERON:0006554!2.62e-10!44;UBERON:0001008!4.97e-10!45;UBERON:0000489!5.54e-10!32;UBERON:0004211!8.78e-10!16;UBERON:0001285!8.78e-10!16;UBERON:0007684!8.78e-10!16;UBERON:0003220!8.78e-10!16;UBERON:0004208!8.78e-10!16;UBERON:0002360!2.07e-09!2;UBERON:0000094!2.07e-09!2;UBERON:0007645!2.07e-09!2;UBERON:0009773!2.34e-09!12;UBERON:0001231!2.34e-09!12;UBERON:0004810!2.34e-09!12;UBERON:0006555!3.62e-09!17;UBERON:0005103!3.62e-09!17;UBERON:0000083!3.62e-09!17;UBERON:0009201!3.62e-09!17;UBERON:0004819!3.62e-09!17;UBERON:0006553!3.62e-09!17;UBERON:0003074!3.62e-09!17;UBERON:0003060!3.62e-09!17;UBERON:0000080!1.27e-08!18;UBERON:0002120!1.27e-08!18;UBERON:0004875!1.27e-08!18;UBERON:0005721!1.27e-08!18;UBERON:0005754!1.27e-08!18;UBERON:0007297!1.27e-08!18;UBERON:0001225!1.28e-08!13;UBERON:0008987!1.28e-08!13;UBERON:0004876!1.08e-07!20;UBERON:0003887!2.71e-07!21;UBERON:0001851!6.12e-07!16;UBERON:0006853!7.60e-07!3;UBERON:0007685!7.60e-07!3;UBERON:0004134!7.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.55e-15;2!UBERON:0005358;2.55e-15;2!UBERON:0001886;2.55e-15;2!UBERON:0004086;2.55e-15;2!UBERON:0005282;2.55e-15;2!UBERON:0005281;2.55e-15;2!UBERON:0005284;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.37e-15,2;UBERON:0005358,2.37e-15,2;UBERON:0001886,2.37e-15,2;UBERON:0004086,2.37e-15,2;UBERON:0005282,2.37e-15,2;UBERON:0005281,2.37e-15,2;UBERON:0005284,6.39e-07,5 | |||
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| ||
|short_description=p@chr10:34987954..34987974,- | |short_description=p@chr10:34987954..34987974,- | ||
}} | }} |
Latest revision as of 13:24, 23 July 2015
Short description: | p@chr10:34987954..34987974, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:34987954..34987974, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.78e-29 | 1 |
seromucus secreting cell | 1.78e-15 | 2 |
fibroblast of choroid plexus | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.37e-15 | 2 |
ventricle of nervous system | 2.37e-15 | 2 |
choroid plexus | 2.37e-15 | 2 |
brain ventricle | 2.37e-15 | 2 |
ventricular system of brain | 2.37e-15 | 2 |
ventricular system of central nervous system | 2.37e-15 | 2 |
brain vasculature | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.78e-29 | 1 |
adenocarcinoma | 1.50e-18 | 25 |
clear cell adenocarcinoma | 2.74e-15 | 2 |
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |
cell type cancer | 2.39e-07 | 143 |
carcinoma | 5.56e-07 | 106 |