FFCP PHASE1:Hg19::chr10:33247025..33247030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:33247025..33247030,+ | |||
|description=CAGE_peak_at_chr10:33247025..33247030,+ | |||
|id=chr10:33247025..33247030,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.68e-10!32;CL:0000548!9.19e-09!679;CL:0000004!9.19e-09!679;CL:0000255!9.19e-09!679;CL:0002057!1.33e-08!42;CL:0000012!1.55e-08!682;CL:0000860!2.36e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0002589;1.23e-15;2!CL:0000860;3.02e-12;33!CL:0002057;3.02e-12;33!CL:0002328;4.88e-11;3!CL:0000473;1.38e-09;39!CL:0000234;1.38e-09;39!CL:0002368;1.85e-09;13!CL:0002202;5.01e-08;9!CL:0002632;5.01e-08;9!CL:0000359;3.58e-07;32!CL:0002595;8.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,7.31e-16,2;CL:0002328,5.98e-11,3;CL:0000860,2.01e-10,42;CL:0002057,2.01e-10,42;CL:0002368,1.94e-09,13;CL:0000473,5.56e-09,48;CL:0000234,5.56e-09,48;CL:0002202,5.27e-08,9;CL:0002632,5.27e-08,9;CL:0000359,8.14e-08,32;CL:0002194,5.79e-07,59;CL:0000576,5.79e-07,59;CL:0000040,5.79e-07,59;CL:0000559,5.79e-07,59;CL:0002595,9.73e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!7.45e-08!33;UBERON:0004571!7.45e-08!33;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0000926!1.74e-07!448;UBERON:0004120!1.74e-07!448;UBERON:0006603!1.74e-07!448;UBERON:0001981!9.08e-07!60;UBERON:0007500!9.08e-07!60;UBERON:0004537!9.08e-07!60;UBERON:0006965!9.08e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.23e-15;2!UBERON:0007204;1.23e-15;2!UBERON:0004815;4.88e-11;3!UBERON:0002031;4.88e-11;3!UBERON:0004573;2.30e-09;33!UBERON:0004571;2.30e-09;33!UBERON:0002185;5.90e-07;5!UBERON:0003834;8.91e-07;5!UBERON:0001533;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,7.31e-16,2;UBERON:0007204,7.31e-16,2;UBERON:0004815,5.98e-11,3;UBERON:0002031,5.98e-11,3;UBERON:0004573,2.96e-10,33;UBERON:0004571,2.96e-10,33;UBERON:0003081,1.88e-08,203;UBERON:0001637,6.96e-08,42;UBERON:0003509,6.96e-08,42;UBERON:0004572,6.96e-08,42;UBERON:0002204,3.77e-07,167;UBERON:0002185,6.65e-07,5;UBERON:0003834,9.73e-07,5;UBERON:0001533,9.73e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.982935746006035,2.79120467188971,0,0,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,3.67768489791571,0.30120591877825,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.464858073811369,1.23350366406548,0.309706370895104,0.863077176966451,0.512321413058201,0.236482229888585,4.82643953031266,1.29096936716765,1.35426486594342,0.564727018627814,0.272906150057846,0,3.06083892370903,1.92557416245656,0.639337125799041,0,0,0,0,0.56738522469114,0,2.00998932205395,3.12889751052121,0.217188844705117,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,0,0,9.26864265692532,0,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0.772921620136887,0,0.337552664482532,0,0.757301322732344,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,1.06537035187876,0.164254312027618,0,0.232420756919918,0,1.40354529212299,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,2.55225424989168,0,0,1.88887408098384,0,0.308033580176089,0.532306030317022,0.869932992075073,1.66791797193528,1.28812398067792,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,1.26377536871694,0,0.243713489631284,1.05650146756755,0,0,0,1.65409603063837,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,1.34060455107157,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.174118413160805,0,0,0.0967563312890851,0,0,0,0.441280633457501,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.321506296930038,0.687697182986169,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,1.27134268827375,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0.638341257770182,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,1.13641803165053,0.251567901752575,0,0,0.604923695052956,0,0,0.477890301491107,0.449803112163605,0.621051827505038,0.414706207840855,0,0.521745061811734,0,0.761610424337591,0,0.363697318405119,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:33247025..33247030,+ | |||
}} |
Latest revision as of 13:20, 23 July 2015
Short description: | p@chr10:33247025..33247030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33247025..33247030, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 7.31e-16 | 2 |
bronchial epithelial cell | 5.98e-11 | 3 |
classical monocyte | 2.01e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-10 | 42 |
respiratory epithelial cell | 1.94e-09 | 13 |
defensive cell | 5.56e-09 | 48 |
phagocyte | 5.56e-09 | 48 |
epithelial cell of tracheobronchial tree | 5.27e-08 | 9 |
epithelial cell of lower respiratory tract | 5.27e-08 | 9 |
vascular associated smooth muscle cell | 8.14e-08 | 32 |
monopoietic cell | 5.79e-07 | 59 |
monocyte | 5.79e-07 | 59 |
monoblast | 5.79e-07 | 59 |
promonocyte | 5.79e-07 | 59 |
smooth muscle cell of the subclavian artery | 9.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 7.31e-16 | 2 |
brachiocephalic vasculature | 7.31e-16 | 2 |
lower respiratory tract epithelium | 5.98e-11 | 3 |
epithelium of bronchus | 5.98e-11 | 3 |
systemic artery | 2.96e-10 | 33 |
systemic arterial system | 2.96e-10 | 33 |
lateral plate mesoderm | 1.88e-08 | 203 |
artery | 6.96e-08 | 42 |
arterial blood vessel | 6.96e-08 | 42 |
arterial system | 6.96e-08 | 42 |
musculoskeletal system | 3.77e-07 | 167 |
bronchus | 6.65e-07 | 5 |
thoracic segment blood vessel | 9.73e-07 | 5 |
subclavian artery | 9.73e-07 | 5 |