FFCP PHASE1:Hg19::chr10:29922542..29922549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:29922542..29922549,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:29922542..29922549,+ | |description=CAGE_peak_at_chr10:29922542..29922549,+ | ||
|id=chr10:29922542..29922549,+ | |id=chr10:29922542..29922549,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.27e-23!42;CL:0000860!8.63e-22!45;CL:0000766!1.33e-14!76;CL:0002194!3.38e-14!63;CL:0000576!3.38e-14!63;CL:0000040!3.38e-14!63;CL:0000559!3.38e-14!63;CL:0002009!1.18e-13!65;CL:0002087!1.22e-12!119;CL:0000738!1.94e-12!140;CL:0000839!1.97e-12!70;CL:0000557!3.29e-12!71;CL:0002031!2.08e-09!124;CL:0000988!2.94e-09!182;CL:0000037!4.08e-09!172;CL:0000566!4.08e-09!172;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112;CL:0002032!9.94e-08!165;CL:0000837!9.94e-08!165;CL:0000842!3.63e-07!3;CL:0000767!4.88e-07!3;CL:0000723!8.22e-07!436 | |ontology_enrichment_celltype=CL:0002057!1.27e-23!42;CL:0000860!8.63e-22!45;CL:0000766!1.33e-14!76;CL:0002194!3.38e-14!63;CL:0000576!3.38e-14!63;CL:0000040!3.38e-14!63;CL:0000559!3.38e-14!63;CL:0002009!1.18e-13!65;CL:0002087!1.22e-12!119;CL:0000738!1.94e-12!140;CL:0000839!1.97e-12!70;CL:0000557!3.29e-12!71;CL:0002031!2.08e-09!124;CL:0000988!2.94e-09!182;CL:0000037!4.08e-09!172;CL:0000566!4.08e-09!172;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112;CL:0002032!9.94e-08!165;CL:0000837!9.94e-08!165;CL:0000842!3.63e-07!3;CL:0000767!4.88e-07!3;CL:0000723!8.22e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.21e-43;6!CL:0002397;4.21e-43;6!CL:0000226;3.86e-38;3!CL:0000842;3.86e-38;3!CL:0000766;2.39e-09;69!CL:0000576;2.85e-09;48!CL:0002087;7.51e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,4.67e-38,3;CL:0000842,4.67e-38,3;CL:0002393,4.66e-29,9;CL:0002397,4.66e-29,9;CL:0000860,3.02e-17,42;CL:0002057,3.02e-17,42;CL:0000473,3.83e-15,48;CL:0000234,3.83e-15,48;CL:0002194,3.45e-12,59;CL:0000576,3.45e-12,59;CL:0000040,3.45e-12,59;CL:0000559,3.45e-12,59;CL:0002087,3.65e-12,115;CL:0002009,8.32e-12,61;CL:0000839,5.98e-11,66;CL:0000557,8.57e-11,67;CL:0000738,2.51e-10,136;CL:0000766,4.48e-10,72;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-10!80;UBERON:0002390!6.86e-10!102;UBERON:0003061!6.86e-10!102;UBERON:0002193!7.73e-10!112;UBERON:0001474!1.76e-09!86;UBERON:0002204!2.57e-09!167;UBERON:0004765!1.43e-07!101;UBERON:0001434!1.43e-07!101;UBERON:0002405!3.21e-07!115;UBERON:0003081!6.48e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.90e-10!80;UBERON:0002390!6.86e-10!102;UBERON:0003061!6.86e-10!102;UBERON:0002193!7.73e-10!112;UBERON:0001474!1.76e-09!86;UBERON:0002204!2.57e-09!167;UBERON:0004765!1.43e-07!101;UBERON:0001434!1.43e-07!101;UBERON:0002405!3.21e-07!115;UBERON:0003081!6.48e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-08;15!UBERON:0000179;1.78e-08;15!UBERON:0000463;1.78e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0002193,6.23e-13,108;UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0000178,1.85e-08,15;UBERON:0000179,1.85e-08,15;UBERON:0000463,1.85e-08,15;UBERON:0004765,3.90e-08,90;UBERON:0002405,6.96e-08,93;UBERON:0001434,2.36e-07,100;UBERON:0003081,5.76e-07,203 | |||
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|short_description=p@chr10:29922542..29922549,+ | |short_description=p@chr10:29922542..29922549,+ | ||
}} | }} |
Latest revision as of 13:03, 23 July 2015
Short description: | p@chr10:29922542..29922549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29922542..29922549, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 4.67e-38 | 3 |
mononuclear cell | 4.67e-38 | 3 |
intermediate monocyte | 4.66e-29 | 9 |
CD14-positive, CD16-positive monocyte | 4.66e-29 | 9 |
classical monocyte | 3.02e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-17 | 42 |
defensive cell | 3.83e-15 | 48 |
phagocyte | 3.83e-15 | 48 |
monopoietic cell | 3.45e-12 | 59 |
monocyte | 3.45e-12 | 59 |
monoblast | 3.45e-12 | 59 |
promonocyte | 3.45e-12 | 59 |
nongranular leukocyte | 3.65e-12 | 115 |
macrophage dendritic cell progenitor | 8.32e-12 | 61 |
myeloid lineage restricted progenitor cell | 5.98e-11 | 66 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
leukocyte | 2.51e-10 | 136 |
myeloid leukocyte | 4.48e-10 | 72 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
hemolymphoid system | 6.23e-13 | 108 |
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
blood | 1.85e-08 | 15 |
haemolymphatic fluid | 1.85e-08 | 15 |
organism substance | 1.85e-08 | 15 |
skeletal element | 3.90e-08 | 90 |
immune system | 6.96e-08 | 93 |
skeletal system | 2.36e-07 | 100 |
lateral plate mesoderm | 5.76e-07 | 203 |