FFCP PHASE1:Hg19::chr10:28414812..28414824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28414812..28414824,- | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_at_chr10:28414812..28414824,- | |description=CAGE_peak_at_chr10:28414812..28414824,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!5.89e-18!23;CL:0000057!3.98e-07!75 | |ontology_enrichment_celltype=CL:0002620!5.89e-18!23;CL:0000057!3.98e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.38e-11;23 | |ontology_enrichment_celltype_v019=CL:0002620;5.38e-11;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.04e-11,23 | |||
|ontology_enrichment_development_v019=UBERON:0005795;5.76e-07;10 | |ontology_enrichment_development_v019=UBERON:0005795;5.76e-07;10 | ||
|ontology_enrichment_disease=DOID:0060084!4.30e-11!3;DOID:127!4.30e-11!3;DOID:0060072!2.09e-08!4 | |ontology_enrichment_disease=DOID:0060084!4.30e-11!3;DOID:127!4.30e-11!3;DOID:0060072!2.09e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.93e-21;3!DOID:127;4.93e-21;3!DOID:0060072;4.87e-16;4!DOID:154;7.21e-09;2!DOID:4236;7.21e-09;2 | |ontology_enrichment_disease_v019=DOID:0060084;4.93e-21;3!DOID:127;4.93e-21;3!DOID:0060072;4.87e-16;4!DOID:154;7.21e-09;2!DOID:4236;7.21e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.46e-21,3;DOID:127,4.46e-21,3;DOID:0060072,4.51e-16,4;DOID:154,6.94e-09,2;DOID:4236,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.72e-09!40;UBERON:0003102!2.43e-08!95;UBERON:0002199!7.54e-08!45;UBERON:0002416!7.54e-08!45;UBERON:0000162!2.68e-07!14;UBERON:0001353!2.68e-07!14;UBERON:0000163!2.68e-07!14;UBERON:0006866!2.68e-07!14;UBERON:0000164!2.68e-07!14;UBERON:0000931!2.68e-07!14;UBERON:0004122!9.09e-07!15 | |ontology_enrichment_uberon=UBERON:0002097!3.72e-09!40;UBERON:0003102!2.43e-08!95;UBERON:0002199!7.54e-08!45;UBERON:0002416!7.54e-08!45;UBERON:0000162!2.68e-07!14;UBERON:0001353!2.68e-07!14;UBERON:0000163!2.68e-07!14;UBERON:0006866!2.68e-07!14;UBERON:0000164!2.68e-07!14;UBERON:0000931!2.68e-07!14;UBERON:0004122!9.09e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.57e-17;1!UBERON:0009842;9.57e-17;1!UBERON:0003704;9.57e-17;1!UBERON:0001171;9.57e-17;1!UBERON:0001172;9.57e-17;1 | |ontology_enrichment_uberon_v019=UBERON:0001282;9.57e-17;1!UBERON:0009842;9.57e-17;1!UBERON:0003704;9.57e-17;1!UBERON:0001171;9.57e-17;1!UBERON:0001172;9.57e-17;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.21e-16,1;UBERON:0009842,1.21e-16,1;UBERON:0003704,1.21e-16,1;UBERON:0001171,1.21e-16,1;UBERON:0001172,1.21e-16,1 | |||
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| ||
|short_description=p@chr10:28414812..28414824,- | |short_description=p@chr10:28414812..28414824,- | ||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28414812..28414824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28414812..28414824, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.04e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.21e-16 | 1 |
acinus | 1.21e-16 | 1 |
intrahepatic bile duct | 1.21e-16 | 1 |
portal lobule | 1.21e-16 | 1 |
hepatic acinus | 1.21e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.46e-21 | 3 |
leiomyoma | 4.46e-21 | 3 |
benign neoplasm | 4.51e-16 | 4 |
mixed cell type cancer | 6.94e-09 | 2 |
carcinosarcoma | 6.94e-09 | 2 |