FFCP PHASE1:Hg19::chr10:28033659..28033673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000419777_5end | |association_with_transcript=-41bp_to_ENST00000419777_5end | ||
|cluster_id=chr10:28033659..28033673,+ | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_3_at_ENST00000419777_5end | |description=CAGE_peak_3_at_ENST00000419777_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002552!1.19e-15!5;CL:0000057!7.88e-13!75;CL:0002620!1.47e-11!23;CL:0000135!8.83e-11!3;CL:0000386!8.83e-11!3;CL:0000388!8.83e-11!3;CL:0000055!3.24e-08!180 | |ontology_enrichment_celltype=CL:0002552!1.19e-15!5;CL:0000057!7.88e-13!75;CL:0002620!1.47e-11!23;CL:0000135!8.83e-11!3;CL:0000386!8.83e-11!3;CL:0000388!8.83e-11!3;CL:0000055!3.24e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.83e-14;3!CL:0000388;1.83e-14;3!CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002552;3.22e-09;5!CL:0002537;3.22e-09;5!CL:0002319;6.43e-07;25 | |ontology_enrichment_celltype_v019=CL:0000135;1.83e-14;3!CL:0000388;1.83e-14;3!CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002552;3.22e-09;5!CL:0002537;3.22e-09;5!CL:0002319;6.43e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.83e-14,3;CL:0000388,1.83e-14,3;CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002552,2.97e-09,5;CL:0002537,3.49e-09,5;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15 | |ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;2.57e-14;11 | |ontology_enrichment_disease_v019=DOID:3093;2.57e-14;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,2.57e-14,11 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.19e-12!95;UBERON:0000043!8.83e-11!3;UBERON:0001828!1.22e-09!8;UBERON:0000033!1.65e-07!123;UBERON:0004121!3.85e-07!169;UBERON:0002097!3.86e-07!40;UBERON:0000161!4.81e-07!35;UBERON:0000153!6.37e-07!129;UBERON:0007811!6.37e-07!129;UBERON:0000475!7.48e-07!365;UBERON:0000924!7.81e-07!173;UBERON:0006601!7.81e-07!173 | |ontology_enrichment_uberon=UBERON:0003102!1.19e-12!95;UBERON:0000043!8.83e-11!3;UBERON:0001828!1.22e-09!8;UBERON:0000033!1.65e-07!123;UBERON:0004121!3.85e-07!169;UBERON:0002097!3.86e-07!40;UBERON:0000161!4.81e-07!35;UBERON:0000153!6.37e-07!129;UBERON:0007811!6.37e-07!129;UBERON:0000475!7.48e-07!365;UBERON:0000924!7.81e-07!173;UBERON:0006601!7.81e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.83e-14;3!UBERON:0000043;1.83e-14;3!UBERON:0007845;1.83e-14;3!UBERON:0000305;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.83e-14;3!UBERON:0000043;1.83e-14;3!UBERON:0007845;1.83e-14;3!UBERON:0000305;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.83e-14,3;UBERON:0000043,1.83e-14,3;UBERON:0007845,1.83e-14,3;UBERON:0000305,6.39e-07,7 | |||
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| ||
|short_description=p3@ENST00000419777 | |short_description=p3@ENST00000419777 | ||
}} | }} |
Latest revision as of 12:56, 23 July 2015
Short description: | p3@ENST00000419777 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000419777_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | -41bp_to_ENST00000419777_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.83e-14 | 3 |
tendon cell | 1.83e-14 | 3 |
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
fibroblast of gingiva | 2.97e-09 | 5 |
amnion mesenchymal stem cell | 3.49e-09 | 5 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.83e-14 | 3 |
tendon | 1.83e-14 | 3 |
regular connective tissue | 1.83e-14 | 3 |
amnion | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.57e-14 | 11 |