FFCP PHASE1:Hg19::chr10:26964681..26964713,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:26964681..26964713,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr10:26964681..26964713,- | |description=CAGE_peak_at_chr10:26964681..26964713,- | ||
|id=chr10:26964681..26964713,- | |id=chr10:26964681..26964713,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.35e-11;19!CL:0002553;2.08e-10;1!CL:0000333;1.89e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.34e-11,19;CL:0002553,2.08e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.50e-07;29!UBERON:0001041;2.72e-07;30 | |||
|ontology_enrichment_disease=DOID:3095!1.20e-16!22;DOID:2994!1.20e-16!22;DOID:171!9.77e-15!10;DOID:0050687!1.15e-11!143;DOID:162!4.14e-11!235;DOID:14566!1.01e-10!239;DOID:1036!8.48e-09!8;DOID:3905!1.57e-07!9;DOID:169!6.58e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.11e-18;8!DOID:3905;5.75e-16;9!DOID:171;2.42e-15;10!DOID:1324;1.03e-14;15!DOID:0050615;8.69e-14;16!DOID:1325;5.39e-12;7!DOID:3904;5.39e-12;7!DOID:3095;1.84e-10;22!DOID:2994;1.84e-10;22!DOID:5409;7.32e-10;4!DOID:3908;5.61e-08;5!DOID:8692;1.64e-07;31!DOID:169;3.55e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.11e-18,8;DOID:3905,5.64e-16,9;DOID:171,2.42e-15,10;DOID:1324,1.02e-14,15;DOID:162,6.86e-14,235;DOID:0050615,8.57e-14,16;DOID:14566,1.55e-13,239;DOID:1325,5.39e-12,7;DOID:3904,5.39e-12,7;DOID:0050687,1.04e-11,143;DOID:3095,1.75e-10,22;DOID:2994,1.75e-10,22;DOID:5409,6.84e-10,4;DOID:0050686,6.29e-09,137;DOID:3908,5.81e-08,5;DOID:8692,2.88e-07,31;DOID:169,3.55e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!7.70e-12!22;UBERON:0001869!1.08e-11!32;UBERON:0001893!6.65e-11!34;UBERON:0001950!2.22e-10!20;UBERON:0000956!2.70e-10!25;UBERON:0000203!2.70e-10!25;UBERON:0002791!2.96e-09!33;UBERON:0002020!6.12e-09!34;UBERON:0003528!6.12e-09!34;UBERON:0002780!9.80e-09!41;UBERON:0001890!9.80e-09!41;UBERON:0006240!9.80e-09!41;UBERON:0003080!1.75e-08!42;UBERON:0000013!3.22e-08!5;UBERON:0002410!3.22e-08!5;UBERON:0001872!2.05e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.35e-11;19!UBERON:0000115;1.35e-11;19!UBERON:0002346;1.81e-10;4!UBERON:0000923;1.81e-10;4!UBERON:0010316;1.81e-10;4!UBERON:0005291;1.81e-10;4!UBERON:0002048;5.35e-10;22!UBERON:0004807;5.35e-10;22!UBERON:0000117;5.35e-10;22!UBERON:0000171;5.35e-10;22!UBERON:0000170;5.35e-10;22!UBERON:0002050;1.52e-08;5!UBERON:0005423;1.52e-08;5!UBERON:0000013;1.89e-08;5!UBERON:0002410;1.89e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.34e-11,19;UBERON:0000115,1.34e-11,19;UBERON:0002048,5.30e-10,22;UBERON:0000117,5.30e-10,22;UBERON:0000171,5.30e-10,22;UBERON:0000170,5.30e-10,22;UBERON:0005597,5.30e-10,22;UBERON:0000118,5.30e-10,22;UBERON:0000013,1.89e-08,5;UBERON:0002410,1.89e-08,5;UBERON:0004807,7.92e-08,28 | |||
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| ||
|short_description=p@chr10:26964681..26964713,- | |short_description=p@chr10:26964681..26964713,- | ||
}} | }} |
Latest revision as of 12:50, 23 July 2015
Short description: | p@chr10:26964681..26964713, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:26964681..26964713, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.34e-11 | 19 |
lung fibroblast | 2.08e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.34e-11 | 19 |
lung epithelium | 1.34e-11 | 19 |
lung | 5.30e-10 | 22 |
respiratory tube | 5.30e-10 | 22 |
respiration organ | 5.30e-10 | 22 |
pair of lungs | 5.30e-10 | 22 |
lung primordium | 5.30e-10 | 22 |
lung bud | 5.30e-10 | 22 |
sympathetic nervous system | 1.89e-08 | 5 |
autonomic nervous system | 1.89e-08 | 5 |
respiratory system epithelium | 7.92e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.11e-18 | 8 |
lung carcinoma | 5.64e-16 | 9 |
neuroectodermal tumor | 2.42e-15 | 10 |
lung cancer | 1.02e-14 | 15 |
cancer | 6.86e-14 | 235 |
respiratory system cancer | 8.57e-14 | 16 |
disease of cellular proliferation | 1.55e-13 | 239 |
bronchus cancer | 5.39e-12 | 7 |
bronchogenic carcinoma | 5.39e-12 | 7 |
cell type cancer | 1.04e-11 | 143 |
germ cell and embryonal cancer | 1.75e-10 | 22 |
germ cell cancer | 1.75e-10 | 22 |
lung small cell carcinoma | 6.84e-10 | 4 |
organ system cancer | 6.29e-09 | 137 |
non-small cell lung carcinoma | 5.81e-08 | 5 |
myeloid leukemia | 2.88e-07 | 31 |
neuroendocrine tumor | 3.55e-07 | 6 |