FFCP PHASE1:Hg19::chr10:17707949..17707965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17707949..17707965,+ | |||
|description=CAGE_peak_at_chr10:17707949..17707965,+ | |description=CAGE_peak_at_chr10:17707949..17707965,+ | ||
|id=chr10:17707949..17707965,+ | |id=chr10:17707949..17707965,+ | ||
|ontology_enrichment_celltype=CL:0002274!7.66e-11!5;CL:0000457!7.66e-11!5;CL:0002191!7.66e-11!5;CL:0000097!7.66e-11!5;CL:0000831!7.66e-11!5;CL:0002028!7.66e-11!5;CL:0000839!7.40e-09!70;CL:0000557!1.19e-08!71;CL:0000766!1.30e-08!76;CL:0002057!3.37e-08!42;CL:0000860!2.15e-07!45 | |ontology_enrichment_celltype=CL:0002274!7.66e-11!5;CL:0000457!7.66e-11!5;CL:0002191!7.66e-11!5;CL:0000097!7.66e-11!5;CL:0000831!7.66e-11!5;CL:0002028!7.66e-11!5;CL:0000839!7.40e-09!70;CL:0000557!1.19e-08!71;CL:0000766!1.30e-08!76;CL:0002057!3.37e-08!42;CL:0000860!2.15e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.14e-22;33!CL:0002057;3.14e-22;33!CL:0000473;2.38e-14;39!CL:0000234;2.38e-14;39!CL:0000097;3.28e-11;5!CL:0000576;2.02e-09;48!CL:0000136;3.17e-09;13!CL:0000766;3.22e-09;69!CL:0000815;1.75e-07;2!CL:0000792;1.75e-07;2!CL:0002677;1.75e-07;2 | |ontology_enrichment_celltype_v019=CL:0000860;3.14e-22;33!CL:0002057;3.14e-22;33!CL:0000473;2.38e-14;39!CL:0000234;2.38e-14;39!CL:0000097;3.28e-11;5!CL:0000576;2.02e-09;48!CL:0000136;3.17e-09;13!CL:0000766;3.22e-09;69!CL:0000815;1.75e-07;2!CL:0000792;1.75e-07;2!CL:0002677;1.75e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.20e-18,42;CL:0002057,4.20e-18,42;CL:0000839,1.92e-17,66;CL:0000557,3.61e-17,67;CL:0000766,6.50e-16,72;CL:0000473,9.55e-16,48;CL:0000234,9.55e-16,48;CL:0002194,1.93e-12,59;CL:0000576,1.93e-12,59;CL:0000040,1.93e-12,59;CL:0000559,1.93e-12,59;CL:0002009,5.16e-12,61;CL:0000097,3.04e-11,5;CL:0002028,3.04e-11,5;CL:0002031,4.29e-11,120;CL:0000763,2.94e-10,108;CL:0000049,2.94e-10,108;CL:0000738,1.24e-09,136;CL:0000136,4.43e-08,15;CL:0002032,6.35e-08,161;CL:0000837,6.35e-08,161;CL:0002087,1.28e-07,115;CL:0000037,1.56e-07,168;CL:0000815,2.25e-07,2;CL:0000792,2.25e-07,2;CL:0002677,2.25e-07,2;CL:0000988,4.44e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-12;42 | |ontology_enrichment_development_v019=CL:0002057;2.80e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.51e-08!80;UBERON:0002405!2.46e-07!115;UBERON:0002193!4.61e-07!112;UBERON:0004765!6.36e-07!101;UBERON:0001434!6.36e-07!101;UBERON:0001474!6.59e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!7.51e-08!80;UBERON:0002405!2.46e-07!115;UBERON:0002193!4.61e-07!112;UBERON:0004765!6.36e-07!101;UBERON:0001434!6.36e-07!101;UBERON:0001474!6.59e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.02e-15,76;UBERON:0001474,7.46e-14,82;UBERON:0004765,1.57e-12,90;UBERON:0002405,4.31e-12,93;UBERON:0002390,2.03e-11,98;UBERON:0003061,2.03e-11,98;UBERON:0001434,3.61e-11,100;UBERON:0002193,2.94e-10,108 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,1.23882548358041,0.28769239232215,0,0.47296445977717,2.41321976515633,0.645484683583826,0,0,0,0.674170453335254,0.918251677112708,1.92557416245656,2.55734850319616,0,0,0,0.870627715885752,1.13477044938228,1.24564449799115,0,0,1.52032191293582,0,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,1.4203434172042,0,0,1.17842362989935,0.664601683750863,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.423863802319124,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,2.69526550203004,0.720599767084807,4.54472760334968,0.380987365753014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,1.63205341010842,1.5041393641362,2.14441903734423,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 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| ||
|short_description=p@chr10:17707949..17707965,+ | |short_description=p@chr10:17707949..17707965,+ | ||
}} | }} |
Latest revision as of 12:20, 23 July 2015
Short description: | p@chr10:17707949..17707965, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17707949..17707965, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.20e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.20e-18 | 42 |
myeloid lineage restricted progenitor cell | 1.92e-17 | 66 |
granulocyte monocyte progenitor cell | 3.61e-17 | 67 |
myeloid leukocyte | 6.50e-16 | 72 |
defensive cell | 9.55e-16 | 48 |
phagocyte | 9.55e-16 | 48 |
monopoietic cell | 1.93e-12 | 59 |
monocyte | 1.93e-12 | 59 |
monoblast | 1.93e-12 | 59 |
promonocyte | 1.93e-12 | 59 |
macrophage dendritic cell progenitor | 5.16e-12 | 61 |
mast cell | 3.04e-11 | 5 |
basophil mast progenitor cell | 3.04e-11 | 5 |
hematopoietic lineage restricted progenitor cell | 4.29e-11 | 120 |
myeloid cell | 2.94e-10 | 108 |
common myeloid progenitor | 2.94e-10 | 108 |
leukocyte | 1.24e-09 | 136 |
fat cell | 4.43e-08 | 15 |
hematopoietic oligopotent progenitor cell | 6.35e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.35e-08 | 161 |
nongranular leukocyte | 1.28e-07 | 115 |
hematopoietic stem cell | 1.56e-07 | 168 |
regulatory T cell | 2.25e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.25e-07 | 2 |
naive regulatory T cell | 2.25e-07 | 2 |
hematopoietic cell | 4.44e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.02e-15 | 76 |
bone element | 7.46e-14 | 82 |
skeletal element | 1.57e-12 | 90 |
immune system | 4.31e-12 | 93 |
hematopoietic system | 2.03e-11 | 98 |
blood island | 2.03e-11 | 98 |
skeletal system | 3.61e-11 | 100 |
hemolymphoid system | 2.94e-10 | 108 |