FFCP PHASE1:Hg19::chr10:17279217..17279304,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:17279217..17279304,+ to FFCP PHASE1:Hg19::chr10:17279217..17279304,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17279217..17279304,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_at_chr10:17279217..17279304,+ | |||
|id=chr10:17279217..17279304,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.40e-22!180;CL:0002371!1.13e-16!591;CL:0000048!2.21e-16!430;CL:0002057!3.38e-16!42;CL:0000723!7.27e-15!436;CL:0000144!7.75e-15!625;CL:0000557!1.28e-14!71;CL:0002009!1.48e-14!65;CL:0000860!4.77e-14!45;CL:0000034!5.99e-14!444;CL:0002194!6.36e-14!63;CL:0000576!6.36e-14!63;CL:0000040!6.36e-14!63;CL:0000559!6.36e-14!63;CL:0000766!4.83e-13!76;CL:0000057!5.39e-13!75;CL:0000839!8.15e-13!70;CL:0000222!6.81e-11!119;CL:0002320!1.02e-08!365;CL:0000680!2.45e-08!57;CL:0000056!2.45e-08!57;CL:0000355!2.45e-08!57;CL:0000219!4.49e-08!390;CL:0000134!6.99e-08!358;CL:0000187!9.46e-08!54;CL:0000183!1.47e-07!59;CL:0002620!2.22e-07!23;CL:0000393!2.48e-07!60;CL:0000211!2.48e-07!60;CL:0000012!6.29e-07!682;CL:0000548!6.85e-07!679;CL:0000004!6.85e-07!679;CL:0000255!6.85e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-18;33!CL:0002057;5.08e-18;33!CL:0000473;2.15e-16;39!CL:0000234;2.15e-16;39!CL:0000576;3.70e-08;48!CL:0000766;1.26e-07;69!CL:0002620;1.27e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.82e-19,427;CL:0000473,1.18e-18,48;CL:0000234,1.18e-18,48;CL:0000723,9.62e-18,433;CL:0000860,9.23e-17,42;CL:0002057,9.23e-17,42;CL:0000557,1.19e-16,67;CL:0002009,1.62e-16,61;CL:0000034,2.03e-16,441;CL:0002194,7.70e-16,59;CL:0000576,7.70e-16,59;CL:0000040,7.70e-16,59;CL:0000559,7.70e-16,59;CL:0000766,4.25e-15,72;CL:0000839,6.17e-15,66;CL:0000057,3.50e-14,76;CL:0000222,5.88e-11,121;CL:0002320,2.16e-10,361;CL:0000219,1.45e-09,386;CL:0000134,1.78e-09,354;CL:0000680,8.95e-09,58;CL:0000056,8.95e-09,58;CL:0000355,8.95e-09,58;CL:0000187,3.68e-08,55;CL:0000393,1.11e-07,61;CL:0000211,1.11e-07,61;CL:0002620,1.19e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.30e-25!167;UBERON:0003081!1.98e-19!216;UBERON:0004765!7.51e-16!101;UBERON:0001434!7.51e-16!101;UBERON:0002371!1.65e-15!80;UBERON:0001474!9.21e-15!86;UBERON:0000914!4.73e-12!83;UBERON:0002329!4.73e-12!83;UBERON:0003077!4.73e-12!83;UBERON:0003059!4.73e-12!83;UBERON:0007282!4.73e-12!83;UBERON:0009618!4.73e-12!83;UBERON:0007285!4.73e-12!83;UBERON:0002049!6.09e-11!79;UBERON:0007798!6.09e-11!79;UBERON:0004290!9.33e-11!70;UBERON:0000926!1.97e-10!448;UBERON:0004120!1.97e-10!448;UBERON:0006603!1.97e-10!448;UBERON:0002193!3.27e-10!112;UBERON:0000055!4.84e-10!69;UBERON:0002390!1.08e-09!102;UBERON:0003061!1.08e-09!102;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0002384!1.34e-09!375;UBERON:0004535!1.59e-09!110;UBERON:0004872!4.73e-09!84;UBERON:0001009!4.87e-09!113;UBERON:0001134!2.01e-08!61;UBERON:0002036!2.01e-08!61;UBERON:0003082!2.01e-08!61;UBERON:0001637!2.26e-08!42;UBERON:0003509!2.26e-08!42;UBERON:0004572!2.26e-08!42;UBERON:0000486!5.29e-08!82;UBERON:0002385!5.76e-08!63;UBERON:0001015!5.76e-08!63;UBERON:0000383!5.76e-08!63;UBERON:0002405!1.74e-07!115;UBERON:0004573!4.04e-07!33;UBERON:0004571!4.04e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;8.89e-07;21!UBERON:0010191;8.89e-07;21 | |||
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| ||
|short_description=p@chr10:17279217..17279304,+ | |||
}} | }} |
Latest revision as of 12:18, 23 July 2015
Short description: | p@chr10:17279217..17279304, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17279217..17279304, + |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.82e-19 | 427 |
defensive cell | 1.18e-18 | 48 |
phagocyte | 1.18e-18 | 48 |
somatic stem cell | 9.62e-18 | 433 |
classical monocyte | 9.23e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.23e-17 | 42 |
granulocyte monocyte progenitor cell | 1.19e-16 | 67 |
macrophage dendritic cell progenitor | 1.62e-16 | 61 |
stem cell | 2.03e-16 | 441 |
monopoietic cell | 7.70e-16 | 59 |
monocyte | 7.70e-16 | 59 |
monoblast | 7.70e-16 | 59 |
promonocyte | 7.70e-16 | 59 |
myeloid leukocyte | 4.25e-15 | 72 |
myeloid lineage restricted progenitor cell | 6.17e-15 | 66 |
fibroblast | 3.50e-14 | 76 |
mesodermal cell | 5.88e-11 | 121 |
connective tissue cell | 2.16e-10 | 361 |
motile cell | 1.45e-09 | 386 |
mesenchymal cell | 1.78e-09 | 354 |
muscle precursor cell | 8.95e-09 | 58 |
myoblast | 8.95e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.95e-09 | 58 |
muscle cell | 3.68e-08 | 55 |
electrically responsive cell | 1.11e-07 | 61 |
electrically active cell | 1.11e-07 | 61 |
skin fibroblast | 1.19e-07 | 23 |