FFCP PHASE1:Hg19::chr10:17277164..17277180,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:17277164..17277180,+
|short_description=p@chr10:17277164..17277180,+
|description=CAGE_peak_at_chr10:17277164..17277180,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17277164..17277180,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_at_chr10:17277164..17277180,+ | |||
|id=chr10:17277164..17277180,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.30e-29!180;CL:0002371!2.23e-20!591;CL:0000048!4.86e-20!430;CL:0000144!6.22e-20!625;CL:0000723!1.23e-18!436;CL:0000034!4.66e-18!444;CL:0000057!1.09e-17!75;CL:0000222!3.16e-14!119;CL:0002057!2.53e-13!42;CL:0000012!3.19e-12!682;CL:0002009!6.09e-12!65;CL:0002194!6.24e-12!63;CL:0000576!6.24e-12!63;CL:0000040!6.24e-12!63;CL:0000559!6.24e-12!63;CL:0000548!7.42e-12!679;CL:0000004!7.42e-12!679;CL:0000255!7.42e-12!679;CL:0000557!1.03e-11!71;CL:0000860!1.96e-11!45;CL:0000839!4.19e-11!70;CL:0002320!7.58e-11!365;CL:0000680!9.66e-11!57;CL:0000056!9.66e-11!57;CL:0000355!9.66e-11!57;CL:0000183!1.64e-10!59;CL:0000187!5.90e-10!54;CL:0000134!1.03e-09!358;CL:0000219!1.47e-09!390;CL:0000393!4.94e-09!60;CL:0000211!4.94e-09!60;CL:0000192!9.57e-09!42;CL:0000514!9.57e-09!42;CL:0000766!1.80e-08!76;CL:0000359!1.02e-07!32;CL:0002620!1.84e-07!23;CL:0000003!2.03e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-15;33!CL:0002057;2.46e-15;33!CL:0000473;4.05e-14;39!CL:0000234;4.05e-14;39!CL:0000057;1.06e-08;73!CL:0002620;2.12e-08;23!CL:0000576;3.51e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.10e-22,427;CL:0000723,8.82e-21,433;CL:0000057,2.54e-20,76;CL:0000034,5.83e-20,441;CL:0000473,1.84e-15,48;CL:0000234,1.84e-15,48;CL:0002320,2.65e-14,361;CL:0002194,2.77e-14,59;CL:0000576,2.77e-14,59;CL:0000040,2.77e-14,59;CL:0000559,2.77e-14,59;CL:0002009,7.33e-14,61;CL:0000860,1.83e-13,42;CL:0002057,1.83e-13,42;CL:0000557,3.82e-13,67;CL:0000839,4.99e-13,66;CL:0000134,7.81e-13,354;CL:0000219,2.16e-12,386;CL:0000222,3.77e-11,121;CL:0000766,1.71e-10,72;CL:0002620,8.53e-09,23;CL:0000680,8.17e-08,58;CL:0000056,8.17e-08,58;CL:0000355,8.17e-08,58;CL:0000359,4.18e-07,32;CL:0000187,5.42e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.49e-23!167;UBERON:0003081!3.88e-15!216;UBERON:0000914!2.30e-14!83;UBERON:0002329!2.30e-14!83;UBERON:0003077!2.30e-14!83;UBERON:0003059!2.30e-14!83;UBERON:0007282!2.30e-14!83;UBERON:0009618!2.30e-14!83;UBERON:0007285!2.30e-14!83;UBERON:0004290!1.09e-12!70;UBERON:0002049!1.41e-12!79;UBERON:0007798!1.41e-12!79;UBERON:0001637!8.48e-12!42;UBERON:0003509!8.48e-12!42;UBERON:0004572!8.48e-12!42;UBERON:0004535!9.88e-12!110;UBERON:0004765!1.27e-11!101;UBERON:0001434!1.27e-11!101;UBERON:0002384!3.67e-11!375;UBERON:0001009!6.48e-11!113;UBERON:0000055!1.40e-10!69;UBERON:0002371!1.42e-10!80;UBERON:0000486!1.76e-10!82;UBERON:0001134!1.83e-10!61;UBERON:0002036!1.83e-10!61;UBERON:0003082!1.83e-10!61;UBERON:0000926!2.70e-10!448;UBERON:0004120!2.70e-10!448;UBERON:0006603!2.70e-10!448;UBERON:0004872!2.94e-10!84;UBERON:0002385!5.47e-10!63;UBERON:0001015!5.47e-10!63;UBERON:0000383!5.47e-10!63;UBERON:0001474!6.75e-10!86;UBERON:0004573!7.84e-10!33;UBERON:0004571!7.84e-10!33;UBERON:0001981!1.09e-09!60;UBERON:0007500!1.09e-09!60;UBERON:0004537!1.09e-09!60;UBERON:0006965!1.09e-09!60;UBERON:0000947!1.02e-07!21;UBERON:0010191!1.02e-07!21;UBERON:0002199!1.91e-07!45;UBERON:0002416!1.91e-07!45;UBERON:0002193!2.23e-07!112;UBERON:0002390!9.51e-07!102;UBERON:0003061!9.51e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.45e-08;33!UBERON:0004571;1.45e-08;33!UBERON:0001637;1.97e-08;42!UBERON:0003509;1.97e-08;42!UBERON:0004572;1.97e-08;42!UBERON:0000947;8.21e-08;21!UBERON:0010191;8.21e-08;21!UBERON:0001013;2.36e-07;14 | |||
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| ||
|short_description=p@chr10:17277164..17277180,+ | |||
}} | }} |
Latest revision as of 12:17, 23 July 2015
Short description: | p@chr10:17277164..17277180, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17277164..17277180, + |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.10e-22 | 427 |
somatic stem cell | 8.82e-21 | 433 |
fibroblast | 2.54e-20 | 76 |
stem cell | 5.83e-20 | 441 |
defensive cell | 1.84e-15 | 48 |
phagocyte | 1.84e-15 | 48 |
connective tissue cell | 2.65e-14 | 361 |
monopoietic cell | 2.77e-14 | 59 |
monocyte | 2.77e-14 | 59 |
monoblast | 2.77e-14 | 59 |
promonocyte | 2.77e-14 | 59 |
macrophage dendritic cell progenitor | 7.33e-14 | 61 |
classical monocyte | 1.83e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-13 | 42 |
granulocyte monocyte progenitor cell | 3.82e-13 | 67 |
myeloid lineage restricted progenitor cell | 4.99e-13 | 66 |
mesenchymal cell | 7.81e-13 | 354 |
motile cell | 2.16e-12 | 386 |
mesodermal cell | 3.77e-11 | 121 |
myeloid leukocyte | 1.71e-10 | 72 |
skin fibroblast | 8.53e-09 | 23 |
muscle precursor cell | 8.17e-08 | 58 |
myoblast | 8.17e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.17e-08 | 58 |
vascular associated smooth muscle cell | 4.18e-07 | 32 |
muscle cell | 5.42e-07 | 55 |