FFCP PHASE1:Hg19::chr10:17272505..17272516,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17272505..17272516,- | |||
|description=CAGE_peak_at_chr10:17272505..17272516,- | |description=CAGE_peak_at_chr10:17272505..17272516,- | ||
|id=chr10:17272505..17272516,- | |id=chr10:17272505..17272516,- | ||
|ontology_enrichment_celltype=CL:0000738!9.60e-48!140;CL:0000037!6.03e-43!172;CL:0000566!6.03e-43!172;CL:0000988!7.15e-40!182;CL:0002031!1.45e-37!124;CL:0002087!2.28e-37!119;CL:0002032!3.35e-37!165;CL:0000837!3.35e-37!165;CL:0002057!5.61e-28!42;CL:0000860!3.17e-25!45;CL:0000766!3.94e-21!76;CL:0000557!1.01e-20!71;CL:0000763!4.13e-19!112;CL:0000049!4.13e-19!112;CL:0002009!6.98e-19!65;CL:0000838!4.87e-18!52;CL:0000542!1.79e-17!53;CL:0000051!1.79e-17!53;CL:0000839!2.88e-17!70;CL:0002194!3.89e-17!63;CL:0000576!3.89e-17!63;CL:0000040!3.89e-17!63;CL:0000559!3.89e-17!63;CL:0000134!8.05e-14!358;CL:0002320!6.03e-13!365;CL:0000084!8.89e-12!25;CL:0000827!8.89e-12!25;CL:0000219!1.94e-11!390;CL:0002393!2.27e-11!9;CL:0002397!2.27e-11!9;CL:0000791!2.33e-11!18;CL:0000789!2.33e-11!18;CL:0002420!2.33e-11!18;CL:0002419!2.33e-11!18;CL:0000790!2.33e-11!18;CL:0000034!1.51e-09!444;CL:0000048!3.52e-09!430;CL:0000624!7.81e-09!6;CL:0000723!1.23e-08!436 | |ontology_enrichment_celltype=CL:0000738!9.60e-48!140;CL:0000037!6.03e-43!172;CL:0000566!6.03e-43!172;CL:0000988!7.15e-40!182;CL:0002031!1.45e-37!124;CL:0002087!2.28e-37!119;CL:0002032!3.35e-37!165;CL:0000837!3.35e-37!165;CL:0002057!5.61e-28!42;CL:0000860!3.17e-25!45;CL:0000766!3.94e-21!76;CL:0000557!1.01e-20!71;CL:0000763!4.13e-19!112;CL:0000049!4.13e-19!112;CL:0002009!6.98e-19!65;CL:0000838!4.87e-18!52;CL:0000542!1.79e-17!53;CL:0000051!1.79e-17!53;CL:0000839!2.88e-17!70;CL:0002194!3.89e-17!63;CL:0000576!3.89e-17!63;CL:0000040!3.89e-17!63;CL:0000559!3.89e-17!63;CL:0000134!8.05e-14!358;CL:0002320!6.03e-13!365;CL:0000084!8.89e-12!25;CL:0000827!8.89e-12!25;CL:0000219!1.94e-11!390;CL:0002393!2.27e-11!9;CL:0002397!2.27e-11!9;CL:0000791!2.33e-11!18;CL:0000789!2.33e-11!18;CL:0002420!2.33e-11!18;CL:0002419!2.33e-11!18;CL:0000790!2.33e-11!18;CL:0000034!1.51e-09!444;CL:0000048!3.52e-09!430;CL:0000624!7.81e-09!6;CL:0000723!1.23e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000624;5.20e-20;6!CL:0000791;6.47e-14;18!CL:0000789;6.47e-14;18!CL:0002419;6.47e-14;18!CL:0002393;1.03e-13;6!CL:0002397;1.03e-13;6!CL:0000576;1.18e-13;48!CL:0000766;1.34e-12;69!CL:0000860;3.50e-12;33!CL:0002057;3.50e-12;33!CL:0000084;1.27e-11;25!CL:0000898;5.25e-11;3!CL:0000623;6.10e-11;3!CL:0000767;1.58e-10;3!CL:0002087;1.77e-10;104!CL:0000542;1.90e-10;53!CL:0000094;3.60e-10;8!CL:0000784;5.56e-10;3!CL:0000738;6.66e-10;136!CL:0000473;5.31e-09;39!CL:0000234;5.31e-09;39!CL:0000815;7.17e-08;2!CL:0000792;7.17e-08;2!CL:0002677;7.17e-08;2!CL:0001014;8.76e-08;2!CL:0001016;8.76e-08;2!CL:0000988;1.79e-07;177!CL:0000081;2.71e-07;11!CL:0000451;4.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-45,136;CL:0000037,1.71e-36,168;CL:0002031,8.18e-35,120;CL:0002087,1.32e-34,115;CL:0000988,4.80e-34,177;CL:0002032,3.99e-33,161;CL:0000837,3.99e-33,161;CL:0000860,7.03e-25,42;CL:0002057,7.03e-25,42;CL:0000766,1.11e-22,72;CL:0000473,4.03e-21,48;CL:0000234,4.03e-21,48;CL:0002009,5.67e-21,61;CL:0000557,2.03e-20,67;CL:0000624,2.72e-20,6;CL:0002194,1.09e-17,59;CL:0000576,1.09e-17,59;CL:0000040,1.09e-17,59;CL:0000559,1.09e-17,59;CL:0002393,3.43e-17,9;CL:0002397,3.43e-17,9;CL:0000763,5.01e-17,108;CL:0000049,5.01e-17,108;CL:0000838,3.76e-16,52;CL:0000542,9.27e-16,53;CL:0000051,9.27e-16,53;CL:0000839,2.75e-15,66;CL:0000791,4.84e-14,18;CL:0000789,4.84e-14,18;CL:0002420,4.84e-14,18;CL:0002419,4.84e-14,18;CL:0000790,4.84e-14,18;CL:0000134,6.10e-12,354;CL:0000084,1.23e-11,25;CL:0000827,1.23e-11,25;CL:0002320,1.75e-11,361;CL:0000898,4.70e-11,3;CL:0000623,4.86e-11,3;CL:0000825,4.86e-11,3;CL:0000767,8.53e-11,3;CL:0000094,2.11e-10,8;CL:0000784,5.16e-10,3;CL:0000219,7.14e-10,386;CL:0000034,1.82e-08,441;CL:0000048,6.43e-08,427;CL:0000815,7.07e-08,2;CL:0000792,7.07e-08,2;CL:0002677,7.07e-08,2;CL:0001014,1.02e-07,2;CL:0001016,1.02e-07,2;CL:0000723,1.19e-07,433;CL:0000081,1.86e-07,11;CL:0000451,4.24e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;8.02e-19;42!CL:0000790;6.47e-14;18!CL:0000051;1.90e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-20!102;UBERON:0003061!2.02e-20!102;UBERON:0002371!5.66e-19!80;UBERON:0001474!1.72e-17!86;UBERON:0002193!5.31e-17!112;UBERON:0004765!1.04e-12!101;UBERON:0001434!1.04e-12!101;UBERON:0002405!1.31e-12!115;UBERON:0002384!3.36e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.60e-17,76;UBERON:0001474,1.27e-15,82;UBERON:0002390,7.40e-15,98;UBERON:0003061,7.40e-15,98;UBERON:0002405,1.57e-14,93;UBERON:0004765,1.01e-13,90;UBERON:0002193,6.68e-13,108;UBERON:0001434,8.84e-12,100;UBERON:0002384,7.38e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,4.72037132218685,1.91914699048606,2.47705797305722,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0.880801318004542,0.553995408531877,3.40925560699241,3.25516306073778,0,0,0,0.726991193897824,0,0.242584061187816,1.62700325833979,1.23350366406548,0,0.575384784644301,0.512321413058201,1.6553756092201,1.37898272294647,0.645484683583826,0,2.07066573496865,0.545812300115692,0.674170453335254,1.22433556948361,0.641858054152187,1.27867425159808,0,0.997318288108159,1.70489900213078,2.03146467040009,0.56738522469114,0,0,1.5644487552606,1.3031330682307,0,0.736555271975129,0.949387162322653,2.11255286311942,2.12604299965044,1.67726916406701,1.57260083605093,2.55300717830561,0.803627933485401,4.27519115611873,0.99458338599545,1.64397738388171,0,0,0,0.853460445133014,0,1.14950487990897,1.32208974556972,0,3.41527781465669,2.93618594685469,1.14681968437569,1.32171328579026,1.12101712596307,0.263384084775077,1.96709770113833,3.53709686474248,5.34563897398724,0.501559486172034,4.56291173287027,2.36723902867367,5.84480185223734,1.11410456885174,2.3568472597987,1.77227115666897,1.08321545506006,1.79327847615945,1.95089021339817,0.822189523018381,0.829050053357545,0.289803085735052,3.41059095272739,1.33770414044857,1.04535523804977,0.113309342697566,3.83220493601921,5.49803912772208,0.506039384039006,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.710331756132051,0,4.03213486449465,7.75576567772171,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,1.43094374583205,2.28797964312051,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,11.6334079244498,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.75745460055828,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,6.90008239550455,2.82354679815446,0.254094624222463,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,2.15714200818617,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0.451191321234361,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.321506296930038,0.275078873194468,0,2.249738915515,3.0952078182318,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0,0,0,0.39997479170986,0.320075189082423,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,4.72037132218685,1.91914699048606,2.47705797305722,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0.880801318004542,0.553995408531877,3.40925560699241,3.25516306073778,0,0,0,0.726991193897824,0,0.242584061187816,1.62700325833979,1.23350366406548,0,0.575384784644301,0.512321413058201,1.6553756092201,1.37898272294647,0.645484683583826,0,2.07066573496865,0.545812300115692,0.674170453335254,1.22433556948361,0.641858054152187,1.27867425159808,0,0.997318288108159,1.70489900213078,2.03146467040009,0.56738522469114,0,0,1.5644487552606,1.3031330682307,0,0.736555271975129,0.949387162322653,2.11255286311942,2.12604299965044,1.67726916406701,1.57260083605093,2.55300717830561,0.803627933485401,4.27519115611873,0.99458338599545,1.64397738388171,0,0,0,0.853460445133014,0,1.14950487990897,1.32208974556972,0,3.41527781465669,2.93618594685469,1.14681968437569,1.32171328579026,1.12101712596307,0.263384084775077,1.96709770113833,3.53709686474248,5.34563897398724,0.501559486172034,4.56291173287027,2.36723902867367,5.84480185223734,1.11410456885174,2.3568472597987,1.77227115666897,1.08321545506006,1.79327847615945,1.95089021339817,0.822189523018381,0.829050053357545,0.289803085735052,3.41059095272739,1.33770414044857,1.04535523804977,0.113309342697566,3.83220493601921,5.49803912772208,0.506039384039006,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.710331756132051,0,4.03213486449465,7.75576567772171,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,1.43094374583205,2.28797964312051,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,11.6334079244498,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.75745460055828,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,6.90008239550455,2.82354679815446,0.254094624222463,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,2.15714200818617,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0.451191321234361,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.321506296930038,0.275078873194468,0,2.249738915515,3.0952078182318,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0,0,0,0.39997479170986,0.320075189082423,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:17272505..17272516,- | |short_description=p@chr10:17272505..17272516,- | ||
}} | }} |
Latest revision as of 12:15, 23 July 2015
Short description: | p@chr10:17272505..17272516, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17272505..17272516, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.60e-17 | 76 |
bone element | 1.27e-15 | 82 |
hematopoietic system | 7.40e-15 | 98 |
blood island | 7.40e-15 | 98 |
immune system | 1.57e-14 | 93 |
skeletal element | 1.01e-13 | 90 |
hemolymphoid system | 6.68e-13 | 108 |
skeletal system | 8.84e-12 | 100 |
connective tissue | 7.38e-11 | 371 |