FFCP PHASE1:Hg19::chr10:17044176..17044206,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17044176..17044206,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:17044176..17044206,- | |description=CAGE_peak_at_chr10:17044176..17044206,- | ||
|id=chr10:17044176..17044206,- | |id=chr10:17044176..17044206,- | ||
|ontology_enrichment_celltype=CL:0000738!2.19e-33!140;CL:0000037!1.87e-26!172;CL:0000566!1.87e-26!172;CL:0000988!2.39e-24!182;CL:0002031!9.20e-22!124;CL:0002032!3.08e-21!165;CL:0000837!3.08e-21!165;CL:0002087!1.45e-19!119;CL:0000766!3.88e-19!76;CL:0002057!7.89e-16!42;CL:0000557!1.20e-15!71;CL:0000860!1.74e-14!45;CL:0002320!2.32e-14!365;CL:0000763!2.35e-14!112;CL:0000049!2.35e-14!112;CL:0000134!3.96e-14!358;CL:0000839!8.72e-13!70;CL:0002009!1.34e-12!65;CL:0000219!9.96e-12!390;CL:0000034!8.39e-11!444;CL:0000623!1.07e-10!3;CL:0000825!1.07e-10!3;CL:0000767!1.76e-10!3;CL:0002194!3.39e-10!63;CL:0000576!3.39e-10!63;CL:0000040!3.39e-10!63;CL:0000559!3.39e-10!63;CL:0000094!1.42e-09!8;CL:0000048!1.66e-09!430;CL:0000723!3.43e-09!436;CL:0000842!1.14e-08!3;CL:0000624!1.54e-08!6;CL:0000791!1.09e-07!18;CL:0000789!1.09e-07!18;CL:0002420!1.09e-07!18;CL:0002419!1.09e-07!18;CL:0000790!1.09e-07!18;CL:0001014!2.46e-07!2;CL:0001016!2.46e-07!2;CL:0000838!4.15e-07!52;CL:0000542!6.41e-07!53;CL:0000051!6.41e-07!53;CL:0000081!7.65e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.19e-33!140;CL:0000037!1.87e-26!172;CL:0000566!1.87e-26!172;CL:0000988!2.39e-24!182;CL:0002031!9.20e-22!124;CL:0002032!3.08e-21!165;CL:0000837!3.08e-21!165;CL:0002087!1.45e-19!119;CL:0000766!3.88e-19!76;CL:0002057!7.89e-16!42;CL:0000557!1.20e-15!71;CL:0000860!1.74e-14!45;CL:0002320!2.32e-14!365;CL:0000763!2.35e-14!112;CL:0000049!2.35e-14!112;CL:0000134!3.96e-14!358;CL:0000839!8.72e-13!70;CL:0002009!1.34e-12!65;CL:0000219!9.96e-12!390;CL:0000034!8.39e-11!444;CL:0000623!1.07e-10!3;CL:0000825!1.07e-10!3;CL:0000767!1.76e-10!3;CL:0002194!3.39e-10!63;CL:0000576!3.39e-10!63;CL:0000040!3.39e-10!63;CL:0000559!3.39e-10!63;CL:0000094!1.42e-09!8;CL:0000048!1.66e-09!430;CL:0000723!3.43e-09!436;CL:0000842!1.14e-08!3;CL:0000624!1.54e-08!6;CL:0000791!1.09e-07!18;CL:0000789!1.09e-07!18;CL:0002420!1.09e-07!18;CL:0002419!1.09e-07!18;CL:0000790!1.09e-07!18;CL:0001014!2.46e-07!2;CL:0001016!2.46e-07!2;CL:0000838!4.15e-07!52;CL:0000542!6.41e-07!53;CL:0000051!6.41e-07!53;CL:0000081!7.65e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.44e-22;3!CL:0000767;4.67e-22;3!CL:0001014;7.57e-15;2!CL:0001016;7.57e-15;2!CL:0000094;2.85e-14;8!CL:0000791;1.20e-13;18!CL:0000789;1.20e-13;18!CL:0002419;1.20e-13;18!CL:0000097;5.86e-13;5!CL:0000624;5.36e-11;6!CL:0002393;6.35e-11;6!CL:0002397;6.35e-11;6!CL:0000081;2.02e-10;11!CL:0000084;1.12e-09;25!CL:0000037;5.24e-08;1!CL:0001024;5.24e-08;1!CL:0000163;2.05e-07;9!CL:0000766;2.77e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.24e-25,136;CL:0000623,1.49e-22,3;CL:0000825,1.49e-22,3;CL:0000767,4.68e-22,3;CL:0000037,2.89e-21,168;CL:0002032,2.09e-20,161;CL:0000837,2.09e-20,161;CL:0000988,5.81e-20,177;CL:0002031,4.01e-19,120;CL:0001014,7.84e-15,2;CL:0001016,7.84e-15,2;CL:0000094,2.80e-14,8;CL:0000791,1.20e-13,18;CL:0000789,1.20e-13,18;CL:0002420,1.20e-13,18;CL:0002419,1.20e-13,18;CL:0000790,1.20e-13,18;CL:0000766,1.97e-13,72;CL:0000097,5.63e-13,5;CL:0002028,5.63e-13,5;CL:0000763,2.93e-11,108;CL:0000049,2.93e-11,108;CL:0000624,5.27e-11,6;CL:0002087,1.29e-10,115;CL:0000081,2.00e-10,11;CL:0000557,3.37e-10,67;CL:0000838,1.11e-09,52;CL:0000084,1.12e-09,25;CL:0000827,1.12e-09,25;CL:0000134,1.41e-09,354;CL:0000542,1.80e-09,53;CL:0000051,1.80e-09,53;CL:0002320,2.68e-09,361;CL:0000219,2.60e-08,386;CL:0001024,5.82e-08,1;CL:0000034,1.40e-07,441;CL:0002393,1.92e-07,9;CL:0002397,1.92e-07,9;CL:0000163,2.00e-07,9;CL:0000048,4.22e-07,427;CL:0000723,6.20e-07,433;CL:0000839,7.49e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.05e-16!102;UBERON:0003061!4.05e-16!102;UBERON:0002371!4.23e-16!80;UBERON:0001474!6.80e-16!86;UBERON:0004765!6.45e-15!101;UBERON:0001434!6.45e-15!101;UBERON:0002193!4.99e-14!112;UBERON:0002384!1.30e-13!375;UBERON:0002405!2.48e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.59e-10,76;UBERON:0001474,1.31e-09,82;UBERON:0002384,6.46e-09,371;UBERON:0004765,1.41e-08,90;UBERON:0002405,3.10e-08,93;UBERON:0002390,1.03e-07,98;UBERON:0003061,1.03e-07,98;UBERON:0001434,1.62e-07,100;UBERON:0002193,8.21e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,7.67658796194425,4.02521920621798,0,0,0,0,0,1.17440175733939,2.21598163412751,1.60435557976113,5.20826089718044,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.945928919554341,1.03423704220986,0.645484683583826,0,0.752969358170419,0,0.898893937780338,0.612167784741805,1.60464513538047,1.91801137739712,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.628975936525128,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,7.93027971474155,0.560508562981536,0.526768169550154,3.93419540227666,3.14408610199332,2.46721798799411,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0.68725489096526,1.01207876807801,0,0,0,0,0,0,0,0,8.87069670188823,7.2208852861547,4.77920532813237,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69526550203004,1.29707958075265,4.29224273649692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,7.29013812747131,12.937654491571,9.24069861214188,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,7.67658796194425,4.02521920621798,0,0,0,0,0,1.17440175733939,2.21598163412751,1.60435557976113,5.20826089718044,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.945928919554341,1.03423704220986,0.645484683583826,0,0.752969358170419,0,0.898893937780338,0.612167784741805,1.60464513538047,1.91801137739712,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.628975936525128,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,7.93027971474155,0.560508562981536,0.526768169550154,3.93419540227666,3.14408610199332,2.46721798799411,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0.68725489096526,1.01207876807801,0,0,0,0,0,0,0,0,8.87069670188823,7.2208852861547,4.77920532813237,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69526550203004,1.29707958075265,4.29224273649692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,7.29013812747131,12.937654491571,9.24069861214188,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:17044176..17044206,- | |short_description=p@chr10:17044176..17044206,- | ||
}} | }} |
Latest revision as of 12:10, 23 July 2015
Short description: | p@chr10:17044176..17044206, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17044176..17044206, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.59e-10 | 76 |
bone element | 1.31e-09 | 82 |
connective tissue | 6.46e-09 | 371 |
skeletal element | 1.41e-08 | 90 |
immune system | 3.10e-08 | 93 |
hematopoietic system | 1.03e-07 | 98 |
blood island | 1.03e-07 | 98 |
skeletal system | 1.62e-07 | 100 |
hemolymphoid system | 8.21e-07 | 108 |