FFCP PHASE1:Hg19::chr10:14642400..14642402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:14642400..14642402,- | |||
|description=CAGE_peak_at_chr10:14642400..14642402,- | |description=CAGE_peak_at_chr10:14642400..14642402,- | ||
|id=chr10:14642400..14642402,- | |id=chr10:14642400..14642402,- | ||
|ontology_enrichment_celltype=CL:0002057!7.92e-13!42;CL:0000860!1.35e-12!45;CL:0000738!1.72e-12!140;CL:0002087!1.94e-12!119;CL:0002031!1.20e-10!124;CL:0000037!3.79e-10!172;CL:0000566!3.79e-10!172;CL:0000766!3.87e-10!76;CL:0002032!8.07e-10!165;CL:0000837!8.07e-10!165;CL:0000988!7.65e-09!182;CL:0000839!1.15e-08!70;CL:0002194!1.23e-08!63;CL:0000576!1.23e-08!63;CL:0000040!1.23e-08!63;CL:0000559!1.23e-08!63;CL:0000557!1.92e-08!71;CL:0002009!3.65e-08!65 | |ontology_enrichment_celltype=CL:0002057!7.92e-13!42;CL:0000860!1.35e-12!45;CL:0000738!1.72e-12!140;CL:0002087!1.94e-12!119;CL:0002031!1.20e-10!124;CL:0000037!3.79e-10!172;CL:0000566!3.79e-10!172;CL:0000766!3.87e-10!76;CL:0002032!8.07e-10!165;CL:0000837!8.07e-10!165;CL:0000988!7.65e-09!182;CL:0000839!1.15e-08!70;CL:0002194!1.23e-08!63;CL:0000576!1.23e-08!63;CL:0000040!1.23e-08!63;CL:0000559!1.23e-08!63;CL:0000557!1.92e-08!71;CL:0002009!3.65e-08!65 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.74e-25;6!CL:0002397;1.74e-25;6!CL:0000775;2.10e-23;3!CL:0000576;6.10e-10;48!CL:0000094;2.16e-09;8!CL:0000766;2.94e-07;69!CL:0000081;4.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.68e-23,3;CL:0002393,2.68e-17,9;CL:0002397,2.68e-17,9;CL:0000766,4.62e-14,72;CL:0000860,4.80e-14,42;CL:0002057,4.80e-14,42;CL:0000738,8.94e-14,136;CL:0000473,2.87e-12,48;CL:0000234,2.87e-12,48;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000037,5.38e-11,168;CL:0002087,8.11e-11,115;CL:0000988,2.16e-10,177;CL:0002031,2.44e-10,120;CL:0002194,8.95e-10,59;CL:0000576,8.95e-10,59;CL:0000040,8.95e-10,59;CL:0000559,8.95e-10,59;CL:0002009,1.88e-09,61;CL:0000094,1.99e-09,8;CL:0000763,3.18e-09,108;CL:0000049,3.18e-09,108;CL:0000839,9.93e-09,66;CL:0000557,1.35e-08,67;CL:0000081,4.30e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.17e-08!112;UBERON:0002390!1.09e-07!102;UBERON:0003061!1.09e-07!102 | |ontology_enrichment_uberon=UBERON:0002193!3.17e-08!112;UBERON:0002390!1.09e-07!102;UBERON:0003061!1.09e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-07,76;UBERON:0001474,5.38e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,1.66198622559563,2.80762226458198,2.17010870715852,0,0,0,0,0,0,0,0,0.309706370895104,1.1507695692886,0.256160706529101,0.236482229888585,0.344745680736619,0,2.70852973188684,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.870627715885752,0,0.622822248995575,0.251248665256743,2.08593167368081,0.217188844705117,0,0,0,0,0,0.419317291016752,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,0,0.560508562981536,0,0.196709770113833,1.17903228824749,0.411202997999018,0,0.32592226663359,0,0,0,0.589211814949674,0,0.541607727530031,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.641715181398742,0,0,0,0,0,3.74503511973591,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0.684704037099577,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0.438568099157414,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0.781514011233092,0,0,0,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0.224263725161227,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr10:14642400..14642402,- | |short_description=p@chr10:14642400..14642402,- | ||
}} | }} |
Latest revision as of 12:02, 23 July 2015
Short description: | p@chr10:14642400..14642402, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14642400..14642402, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.68e-23 | 3 |
intermediate monocyte | 2.68e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.68e-17 | 9 |
myeloid leukocyte | 4.62e-14 | 72 |
classical monocyte | 4.80e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.80e-14 | 42 |
leukocyte | 8.94e-14 | 136 |
defensive cell | 2.87e-12 | 48 |
phagocyte | 2.87e-12 | 48 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
hematopoietic stem cell | 5.38e-11 | 168 |
nongranular leukocyte | 8.11e-11 | 115 |
hematopoietic cell | 2.16e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.44e-10 | 120 |
monopoietic cell | 8.95e-10 | 59 |
monocyte | 8.95e-10 | 59 |
monoblast | 8.95e-10 | 59 |
promonocyte | 8.95e-10 | 59 |
macrophage dendritic cell progenitor | 1.88e-09 | 61 |
granulocyte | 1.99e-09 | 8 |
myeloid cell | 3.18e-09 | 108 |
common myeloid progenitor | 3.18e-09 | 108 |
myeloid lineage restricted progenitor cell | 9.93e-09 | 66 |
granulocyte monocyte progenitor cell | 1.35e-08 | 67 |
blood cell | 4.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-07 | 76 |
bone element | 5.38e-07 | 82 |