FFCP PHASE1:Hg19::chr10:135092487..135092526,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135092487..135092526,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:135092487..135092526,- | |description=CAGE_peak_at_chr10:135092487..135092526,- | ||
|id=chr10:135092487..135092526,- | |id=chr10:135092487..135092526,- | ||
|ontology_enrichment_celltype=CL:0002057!5.91e-67!42;CL:0000738!1.36e-62!140;CL:0000860!1.69e-61!45;CL:0000766!3.29e-58!76;CL:0000037!4.36e-52!172;CL:0000566!4.36e-52!172;CL:0000988!7.21e-48!182;CL:0002087!2.05e-46!119;CL:0002032!1.01e-45!165;CL:0000837!1.01e-45!165;CL:0000839!2.32e-45!70;CL:0002031!9.07e-45!124;CL:0002194!3.96e-43!63;CL:0000576!3.96e-43!63;CL:0000040!3.96e-43!63;CL:0000559!3.96e-43!63;CL:0000557!1.30e-42!71;CL:0002009!2.28e-41!65;CL:0000763!4.46e-41!112;CL:0000049!4.46e-41!112;CL:0002393!7.72e-16!9;CL:0002397!7.72e-16!9;CL:0000094!8.35e-16!8;CL:0000134!1.53e-14!358;CL:0002320!7.96e-14!365;CL:0000791!5.99e-12!18;CL:0000789!5.99e-12!18;CL:0002420!5.99e-12!18;CL:0002419!5.99e-12!18;CL:0000790!5.99e-12!18;CL:0000219!2.49e-11!390;CL:0000081!6.25e-11!11;CL:0000034!6.87e-09!444;CL:0000048!7.60e-09!430;CL:0000723!1.96e-08!436;CL:0000625!3.96e-08!11;CL:0000084!9.99e-08!25;CL:0000827!9.99e-08!25;CL:0000775!5.71e-07!3;CL:0000767!7.27e-07!3 | |ontology_enrichment_celltype=CL:0002057!5.91e-67!42;CL:0000738!1.36e-62!140;CL:0000860!1.69e-61!45;CL:0000766!3.29e-58!76;CL:0000037!4.36e-52!172;CL:0000566!4.36e-52!172;CL:0000988!7.21e-48!182;CL:0002087!2.05e-46!119;CL:0002032!1.01e-45!165;CL:0000837!1.01e-45!165;CL:0000839!2.32e-45!70;CL:0002031!9.07e-45!124;CL:0002194!3.96e-43!63;CL:0000576!3.96e-43!63;CL:0000040!3.96e-43!63;CL:0000559!3.96e-43!63;CL:0000557!1.30e-42!71;CL:0002009!2.28e-41!65;CL:0000763!4.46e-41!112;CL:0000049!4.46e-41!112;CL:0002393!7.72e-16!9;CL:0002397!7.72e-16!9;CL:0000094!8.35e-16!8;CL:0000134!1.53e-14!358;CL:0002320!7.96e-14!365;CL:0000791!5.99e-12!18;CL:0000789!5.99e-12!18;CL:0002420!5.99e-12!18;CL:0002419!5.99e-12!18;CL:0000790!5.99e-12!18;CL:0000219!2.49e-11!390;CL:0000081!6.25e-11!11;CL:0000034!6.87e-09!444;CL:0000048!7.60e-09!430;CL:0000723!1.96e-08!436;CL:0000625!3.96e-08!11;CL:0000084!9.99e-08!25;CL:0000827!9.99e-08!25;CL:0000775!5.71e-07!3;CL:0000767!7.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.73e-71;33!CL:0002057;6.73e-71;33!CL:0000576;4.18e-53;48!CL:0000473;5.48e-49;39!CL:0000234;5.48e-49;39!CL:0000766;7.23e-39;69!CL:0000094;4.64e-23;8!CL:0002087;5.06e-20;104!CL:0000763;8.65e-17;100!CL:0002393;1.34e-16;6!CL:0002397;1.34e-16;6!CL:0000081;2.64e-16;11!CL:0000738;2.85e-14;136!CL:0000775;9.82e-10;3!CL:0000767;1.43e-09;3!CL:0000988;4.89e-09;177!CL:0000623;5.18e-09;3!CL:0000226;6.00e-09;3!CL:0000842;6.00e-09;3!CL:0000875;3.19e-08;3!CL:0002396;3.19e-08;3!CL:0000219;3.14e-07;193!CL:0000771;3.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-100,42;CL:0002057,1.25e-100,42;CL:0000766,2.73e-87,72;CL:0000473,1.51e-86,48;CL:0000234,1.51e-86,48;CL:0002194,3.18e-70,59;CL:0000576,3.18e-70,59;CL:0000040,3.18e-70,59;CL:0000559,3.18e-70,59;CL:0000738,6.96e-70,136;CL:0002009,1.45e-67,61;CL:0000839,7.06e-65,66;CL:0000557,9.66e-64,67;CL:0002087,4.24e-57,115;CL:0000763,8.14e-54,108;CL:0000049,8.14e-54,108;CL:0000037,1.26e-53,168;CL:0000988,4.18e-50,177;CL:0002031,1.83e-49,120;CL:0002032,1.40e-48,161;CL:0000837,1.40e-48,161;CL:0002393,4.18e-23,9;CL:0002397,4.18e-23,9;CL:0000094,4.71e-23,8;CL:0000134,5.24e-18,354;CL:0002320,2.38e-17,361;CL:0000081,2.67e-16,11;CL:0000219,4.86e-15,386;CL:0000034,9.36e-13,441;CL:0000048,3.18e-12,427;CL:0000723,7.74e-12,433;CL:0000775,9.96e-10,3;CL:0000767,1.43e-09,3;CL:0000623,5.77e-09,3;CL:0000825,5.77e-09,3;CL:0000226,6.42e-09,3;CL:0000842,6.42e-09,3;CL:0000875,2.85e-08,3;CL:0002396,2.85e-08,3;CL:0000771,3.68e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-71;42!CL:0000049;1.11e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-46!102;UBERON:0003061!1.34e-46!102;UBERON:0002193!9.14e-41!112;UBERON:0002371!8.44e-38!80;UBERON:0001474!4.17e-34!86;UBERON:0004765!3.47e-28!101;UBERON:0001434!3.47e-28!101;UBERON:0002405!8.02e-23!115;UBERON:0003081!5.14e-14!216;UBERON:0002384!7.46e-13!375;UBERON:0000178!1.27e-12!15;UBERON:0000179!1.27e-12!15;UBERON:0000463!1.27e-12!15;UBERON:0002204!4.41e-12!167 | |ontology_enrichment_uberon=UBERON:0002390!1.34e-46!102;UBERON:0003061!1.34e-46!102;UBERON:0002193!9.14e-41!112;UBERON:0002371!8.44e-38!80;UBERON:0001474!4.17e-34!86;UBERON:0004765!3.47e-28!101;UBERON:0001434!3.47e-28!101;UBERON:0002405!8.02e-23!115;UBERON:0003081!5.14e-14!216;UBERON:0002384!7.46e-13!375;UBERON:0000178!1.27e-12!15;UBERON:0000179!1.27e-12!15;UBERON:0000463!1.27e-12!15;UBERON:0002204!4.41e-12!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.93e-19;15!UBERON:0000179;5.93e-19;15!UBERON:0000463;5.93e-19;15!UBERON:0002390;1.60e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.85e-67,98;UBERON:0003061,2.85e-67,98;UBERON:0002193,8.99e-60,108;UBERON:0002371,7.52e-55,76;UBERON:0001474,5.37e-50,82;UBERON:0004765,1.59e-44,90;UBERON:0002405,1.03e-42,93;UBERON:0001434,6.52e-39,100;UBERON:0003081,2.75e-25,203;UBERON:0000178,5.32e-19,15;UBERON:0000179,5.32e-19,15;UBERON:0000463,5.32e-19,15;UBERON:0002204,1.12e-18,167;UBERON:0002384,1.87e-16,371;UBERON:0000926,3.65e-12,315;UBERON:0004120,3.65e-12,315;UBERON:0006603,3.65e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5496991311926,11.5148819429164,22.1387056341989,0,0,0.369754010166788,0,0,0.293600439334847,55.3995408531877,30.6833004629317,39.2789675995692,0,0,0,3.78035420826868,2.26725566213286,4.85168122375632,4.41615170120801,3.28934310417461,4.95530193432166,4.31538588483226,2.0492856522328,5.43909128743746,19.9952494827239,14.846147722428,17.6054432572644,6.40023954444856,3.82068610080984,6.96642801779762,13.7737751566906,8.34415470397843,9.59005688698562,1.31940520074686,1.19678194572979,1.27867425159808,5.5139755339431,2.26954089876456,4.35975574296902,3.51748131359441,5.21482918420201,5.42972111762792,1.21079900526674,5.89244217580104,7.27863491114034,4.22510572623884,8.2915676986367,3.35453832813401,15.6136797293628,10.3622056060639,3.05378614724452,5.70025487482497,3.9783335439818,2.00930569141097,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0.382273228125229,3.96513985737078,5.60508562981536,0,0.590129310341499,1.96505381374582,2.87842098599313,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.903450714466637,0.255973222308837,1.24930726552346,1.4206635122641,0,2.41928091869679,2.40696176205157,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.8353130770474,124.089684527464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.594524649154913,0.93733833986777,0,0,0,0,0,0,0,5.1832028885193,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,7.33133754522359,9.88241379354062,0,0,0,0,0,33.7053160776232,29.9161459204025,55.1172632869927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,7.54999702865159,12.0602140317892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,1.52927441428475,3.41788312304498,1.90585420366231,6.58179636937911,9.72709966789076,5.40031437238115,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5496991311926,11.5148819429164,22.1387056341989,0,0,0.369754010166788,0,0,0.293600439334847,55.3995408531877,30.6833004629317,39.2789675995692,0,0,0,3.78035420826868,2.26725566213286,4.85168122375632,4.41615170120801,3.28934310417461,4.95530193432166,4.31538588483226,2.0492856522328,5.43909128743746,19.9952494827239,14.846147722428,17.6054432572644,6.40023954444856,3.82068610080984,6.96642801779762,13.7737751566906,8.34415470397843,9.59005688698562,1.31940520074686,1.19678194572979,1.27867425159808,5.5139755339431,2.26954089876456,4.35975574296902,3.51748131359441,5.21482918420201,5.42972111762792,1.21079900526674,5.89244217580104,7.27863491114034,4.22510572623884,8.2915676986367,3.35453832813401,15.6136797293628,10.3622056060639,3.05378614724452,5.70025487482497,3.9783335439818,2.00930569141097,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0.382273228125229,3.96513985737078,5.60508562981536,0,0.590129310341499,1.96505381374582,2.87842098599313,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.903450714466637,0.255973222308837,1.24930726552346,1.4206635122641,0,2.41928091869679,2.40696176205157,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.8353130770474,124.089684527464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.594524649154913,0.93733833986777,0,0,0,0,0,0,0,5.1832028885193,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,7.33133754522359,9.88241379354062,0,0,0,0,0,33.7053160776232,29.9161459204025,55.1172632869927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,7.54999702865159,12.0602140317892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,1.52927441428475,3.41788312304498,1.90585420366231,6.58179636937911,9.72709966789076,5.40031437238115,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:135092487..135092526,- | |short_description=p@chr10:135092487..135092526,- | ||
}} | }} |
Latest revision as of 11:51, 23 July 2015
Short description: | p@chr10:135092487..135092526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135092487..135092526, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.85e-67 | 98 |
blood island | 2.85e-67 | 98 |
hemolymphoid system | 8.99e-60 | 108 |
bone marrow | 7.52e-55 | 76 |
bone element | 5.37e-50 | 82 |
skeletal element | 1.59e-44 | 90 |
immune system | 1.03e-42 | 93 |
skeletal system | 6.52e-39 | 100 |
lateral plate mesoderm | 2.75e-25 | 203 |
blood | 5.32e-19 | 15 |
haemolymphatic fluid | 5.32e-19 | 15 |
organism substance | 5.32e-19 | 15 |
musculoskeletal system | 1.12e-18 | 167 |
connective tissue | 1.87e-16 | 371 |
mesoderm | 3.65e-12 | 315 |
mesoderm-derived structure | 3.65e-12 | 315 |
presumptive mesoderm | 3.65e-12 | 315 |