FFCP PHASE1:Hg19::chr10:135074946..135074978,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135074946..135074978,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:135074946..135074978,+ | |description=CAGE_peak_at_chr10:135074946..135074978,+ | ||
|id=chr10:135074946..135074978,+ | |id=chr10:135074946..135074978,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.73e-23!140;CL:0002087!3.86e-20!119;CL:0002031!2.20e-19!124;CL:0000037!4.99e-18!172;CL:0000566!4.99e-18!172;CL:0000988!2.62e-17!182;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0002393!3.59e-12!9;CL:0002397!3.59e-12!9;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000838!5.42e-11!52;CL:0000557!2.04e-09!71;CL:0000766!3.87e-09!76;CL:0000624!4.52e-09!6;CL:0002009!1.88e-08!65;CL:0000839!5.21e-08!70;CL:0000791!7.53e-08!18;CL:0000789!7.53e-08!18;CL:0002420!7.53e-08!18;CL:0002419!7.53e-08!18;CL:0000790!7.53e-08!18;CL:0000840!8.94e-08!5;CL:0001029!8.94e-08!5;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | |ontology_enrichment_celltype=CL:0000738!4.73e-23!140;CL:0002087!3.86e-20!119;CL:0002031!2.20e-19!124;CL:0000037!4.99e-18!172;CL:0000566!4.99e-18!172;CL:0000988!2.62e-17!182;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0002393!3.59e-12!9;CL:0002397!3.59e-12!9;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000838!5.42e-11!52;CL:0000557!2.04e-09!71;CL:0000766!3.87e-09!76;CL:0000624!4.52e-09!6;CL:0002009!1.88e-08!65;CL:0000839!5.21e-08!70;CL:0000791!7.53e-08!18;CL:0000789!7.53e-08!18;CL:0002420!7.53e-08!18;CL:0002419!7.53e-08!18;CL:0000790!7.53e-08!18;CL:0000840!8.94e-08!5;CL:0001029!8.94e-08!5;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.54e-21;3!CL:0000226;6.69e-20;3!CL:0000842;6.69e-20;3!CL:0000791;6.32e-13;18!CL:0000789;6.32e-13;18!CL:0002419;6.32e-13;18!CL:0000624;1.59e-10;6!CL:0002393;2.23e-10;6!CL:0002397;2.23e-10;6!CL:0000542;3.56e-10;53!CL:0000767;2.11e-09;3!CL:0000784;2.11e-09;3!CL:0000084;3.79e-09;25!CL:0002591;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.79e-25,136;CL:0000623,3.55e-21,3;CL:0000825,3.55e-21,3;CL:0000226,6.50e-20,3;CL:0000842,6.50e-20,3;CL:0000037,1.75e-19,168;CL:0002087,9.88e-19,115;CL:0000988,2.96e-18,177;CL:0000838,2.70e-16,52;CL:0000542,6.05e-16,53;CL:0000051,6.05e-16,53;CL:0002031,7.88e-16,120;CL:0002032,1.06e-13,161;CL:0000837,1.06e-13,161;CL:0000791,5.46e-13,18;CL:0000789,5.46e-13,18;CL:0002420,5.46e-13,18;CL:0002419,5.46e-13,18;CL:0000790,5.46e-13,18;CL:0000624,1.23e-10,6;CL:0000767,1.78e-09,3;CL:0000784,1.78e-09,3;CL:0000084,3.42e-09,25;CL:0000827,3.42e-09,25;CL:0002591,1.35e-07,1;CL:0002393,4.06e-07,9;CL:0002397,4.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;6.32e-13;18!CL:0000051;3.56e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.13e-11!102;UBERON:0003061!9.13e-11!102;UBERON:0002193!2.36e-09!112;UBERON:0002371!2.07e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!9.13e-11!102;UBERON:0003061!9.13e-11!102;UBERON:0002193!2.36e-09!112;UBERON:0002371!2.07e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,1.18009283054671,0,1.39334510984468,0,0,0,0,0.142169232487422,0,0.553995408531877,2.4065333696417,2.17010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,1.47878700418359,0.637812899895131,0.419317291016752,0.898629049171961,1.05123824989054,0.64290234678832,0.855038231223746,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0.426730222566507,1.20118796110804,0,0,0.954053754535364,3.98449078376614,0.587237189370939,3.05818582500183,1.32171328579026,0.560508562981536,0,1.96709770113833,2.35806457649499,9.86887195197644,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.883817722424512,0.664601683750863,1.08321545506006,0,0.650296737799391,0,0,0,0.741432815810302,1.07016331235885,0,0.113309342697566,0.766440987203842,1.37450978193052,1.01207876807801,0,0,0.950452044448374,0,0.127986611154418,0,0,0,3.02410114837099,8.82552646085574,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,1.66943437013739,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,1.03664057770386,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89607660706745,7.11570997036407,5.64709359630893,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,1.24060815673732,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0.17472666824203,0.343972064943233,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,1.5476039091159,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,1.18009283054671,0,1.39334510984468,0,0,0,0,0.142169232487422,0,0.553995408531877,2.4065333696417,2.17010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,1.47878700418359,0.637812899895131,0.419317291016752,0.898629049171961,1.05123824989054,0.64290234678832,0.855038231223746,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0.426730222566507,1.20118796110804,0,0,0.954053754535364,3.98449078376614,0.587237189370939,3.05818582500183,1.32171328579026,0.560508562981536,0,1.96709770113833,2.35806457649499,9.86887195197644,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.883817722424512,0.664601683750863,1.08321545506006,0,0.650296737799391,0,0,0,0.741432815810302,1.07016331235885,0,0.113309342697566,0.766440987203842,1.37450978193052,1.01207876807801,0,0,0.950452044448374,0,0.127986611154418,0,0,0,3.02410114837099,8.82552646085574,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,1.66943437013739,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,1.03664057770386,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89607660706745,7.11570997036407,5.64709359630893,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,1.24060815673732,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0.17472666824203,0.343972064943233,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,1.5476039091159,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr10:135074946..135074978,+ | |short_description=p@chr10:135074946..135074978,+ | ||
}} | }} |
Latest revision as of 11:50, 23 July 2015
Short description: | p@chr10:135074946..135074978, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135074946..135074978, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.79e-25 | 136 |
natural killer cell | 3.55e-21 | 3 |
pro-NK cell | 3.55e-21 | 3 |
single nucleate cell | 6.50e-20 | 3 |
mononuclear cell | 6.50e-20 | 3 |
hematopoietic stem cell | 1.75e-19 | 168 |
nongranular leukocyte | 9.88e-19 | 115 |
hematopoietic cell | 2.96e-18 | 177 |
lymphoid lineage restricted progenitor cell | 2.70e-16 | 52 |
lymphocyte | 6.05e-16 | 53 |
common lymphoid progenitor | 6.05e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 7.88e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.06e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-13 | 161 |
mature alpha-beta T cell | 5.46e-13 | 18 |
alpha-beta T cell | 5.46e-13 | 18 |
immature T cell | 5.46e-13 | 18 |
mature T cell | 5.46e-13 | 18 |
immature alpha-beta T cell | 5.46e-13 | 18 |
CD4-positive, alpha-beta T cell | 1.23e-10 | 6 |
basophil | 1.78e-09 | 3 |
plasmacytoid dendritic cell | 1.78e-09 | 3 |
T cell | 3.42e-09 | 25 |
pro-T cell | 3.42e-09 | 25 |
smooth muscle cell of the pulmonary artery | 1.35e-07 | 1 |
intermediate monocyte | 4.06e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.06e-07 | 9 |