FFCP PHASE1:Hg19::chr10:135061380..135061396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000300167,ENST00000553459_5end | |||
|cluster_id=chr10:135061380..135061396,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ENST00000300167_5end,CAGE_peak_1_at_ENST00000553459_5end | |||
|id=chr10:135061380..135061396,- | |||
|ontology_enrichment_celltype=CL:0002274!5.97e-14!5;CL:0000457!5.97e-14!5;CL:0002191!5.97e-14!5;CL:0000097!5.97e-14!5;CL:0000831!5.97e-14!5;CL:0002028!5.97e-14!5;CL:0000163!5.66e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.79e-17;10!UBERON:0005564;3.79e-17;10!UBERON:0007297;3.27e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!4.89e-09!1;UBERON:0001018!4.89e-09!1;UBERON:0002473!4.89e-09!1;UBERON:0005340!4.89e-09!1;UBERON:0002316!4.89e-09!1;UBERON:0003544!4.89e-09!1;UBERON:0001020!4.89e-09!1;UBERON:0005970!4.89e-09!1;UBERON:0002437!4.89e-09!1;UBERON:0001882!5.70e-09!1;UBERON:0005403!5.70e-09!1;UBERON:0001301!6.65e-09!1;UBERON:0006834!1.65e-08!1;UBERON:0003135!7.21e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.71e-19;1!UBERON:0005795;2.71e-19;1!UBERON:0011215;2.71e-19;1!UBERON:0001018;2.71e-19;1!UBERON:0002473;2.71e-19;1!UBERON:0005340;2.71e-19;1!UBERON:0003544;2.71e-19;1!UBERON:0005970;2.71e-19;1!UBERON:0002316;2.71e-19;1!UBERON:0001020;2.71e-19;1!UBERON:0002437;2.71e-19;1!UBERON:0001882;4.69e-19;1!UBERON:0001301;4.69e-19;1!UBERON:0005403;4.69e-19;1!UBERON:0003135;1.60e-15;11!UBERON:0005162;2.49e-10;2!UBERON:0000122;2.49e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0000991;1.71e-08;21!UBERON:0003101;4.55e-08;22!UBERON:0000079;4.55e-08;22!UBERON:0006947;3.16e-07;3!UBERON:0004054;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.71e-19,1;UBERON:0011215,2.71e-19,1;UBERON:0001018,2.71e-19,1;UBERON:0002473,2.71e-19,1;UBERON:0005340,2.71e-19,1;UBERON:0003544,2.71e-19,1;UBERON:0005970,2.71e-19,1;UBERON:0002316,2.71e-19,1;UBERON:0001020,2.71e-19,1;UBERON:0002437,2.71e-19,1;UBERON:0001882,3.91e-19,1;UBERON:0005403,3.91e-19,1;UBERON:0001301,5.62e-19,1;UBERON:0003135,1.68e-15,11;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0000991,1.71e-08,21;UBERON:0009196,1.71e-08,21;UBERON:0009117,1.71e-08,21;UBERON:0005564,1.71e-08,21;UBERON:0004176,3.93e-08,22;UBERON:0003101,4.66e-08,22;UBERON:0000079,4.66e-08,22;UBERON:0006947,3.35e-07,3;UBERON:0004054,3.35e-07,3 | |||
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|short_description=p1@ENST00000300167,p1@ENST00000553459 | |||
}} | }} |
Latest revision as of 11:50, 23 July 2015
Short description: | p1@ENST00000300167, p1@ENST00000553459 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000300167_5end, CAGE_peak_1_at_ENST00000553459_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000300167, ENST00000553459_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.71e-19 | 1 |
central nervous system cell part cluster | 2.71e-19 | 1 |
axon tract | 2.71e-19 | 1 |
intercerebral commissure | 2.71e-19 | 1 |
dorsal telencephalic commissure | 2.71e-19 | 1 |
brain white matter | 2.71e-19 | 1 |
brain commissure | 2.71e-19 | 1 |
white matter | 2.71e-19 | 1 |
nervous system commissure | 2.71e-19 | 1 |
cerebral hemisphere white matter | 2.71e-19 | 1 |
nucleus accumbens | 3.91e-19 | 1 |
ventral striatum | 3.91e-19 | 1 |
epididymis | 5.62e-19 | 1 |
male reproductive organ | 1.68e-15 | 11 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
testis | 3.52e-10 | 8 |
gonad | 1.71e-08 | 21 |
indifferent external genitalia | 1.71e-08 | 21 |
indifferent gonad | 1.71e-08 | 21 |
gonad primordium | 1.71e-08 | 21 |
external genitalia | 3.93e-08 | 22 |
male organism | 4.66e-08 | 22 |
male reproductive system | 4.66e-08 | 22 |
male genital duct | 3.35e-07 | 3 |
internal male genitalia | 3.35e-07 | 3 |