FFCP PHASE1:Hg19::chr10:134368869..134368912,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134368869..134368912,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:134368869..134368912,- | |description=CAGE_peak_at_chr10:134368869..134368912,- | ||
|id=chr10:134368869..134368912,- | |id=chr10:134368869..134368912,- | ||
|ontology_enrichment_celltype=CL:0000037!1.22e-48!172;CL:0000566!1.22e-48!172;CL:0002057!1.43e-47!42;CL:0002032!5.74e-46!165;CL:0000837!5.74e-46!165;CL:0000763!1.42e-45!112;CL:0000049!1.42e-45!112;CL:0000766!5.20e-45!76;CL:0000988!5.55e-45!182;CL:0000860!9.62e-44!45;CL:0000738!1.24e-42!140;CL:0002087!4.69e-31!119;CL:0000839!4.85e-30!70;CL:0000557!1.77e-29!71;CL:0002031!2.84e-29!124;CL:0002194!6.73e-28!63;CL:0000576!6.73e-28!63;CL:0000040!6.73e-28!63;CL:0000559!6.73e-28!63;CL:0002009!9.11e-27!65;CL:0000094!8.73e-20!8;CL:0000134!3.73e-14!358;CL:0000081!6.61e-14!11;CL:0002320!1.49e-13!365;CL:0000219!1.90e-11!390;CL:0000048!4.02e-10!430;CL:0000034!6.75e-10!444;CL:0000236!8.28e-10!14;CL:0000723!9.52e-10!436;CL:0000775!8.77e-09!3;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000767!6.27e-08!3;CL:0000842!9.73e-08!3;CL:0000623!6.28e-07!3;CL:0000825!6.28e-07!3 | |ontology_enrichment_celltype=CL:0000037!1.22e-48!172;CL:0000566!1.22e-48!172;CL:0002057!1.43e-47!42;CL:0002032!5.74e-46!165;CL:0000837!5.74e-46!165;CL:0000763!1.42e-45!112;CL:0000049!1.42e-45!112;CL:0000766!5.20e-45!76;CL:0000988!5.55e-45!182;CL:0000860!9.62e-44!45;CL:0000738!1.24e-42!140;CL:0002087!4.69e-31!119;CL:0000839!4.85e-30!70;CL:0000557!1.77e-29!71;CL:0002031!2.84e-29!124;CL:0002194!6.73e-28!63;CL:0000576!6.73e-28!63;CL:0000040!6.73e-28!63;CL:0000559!6.73e-28!63;CL:0002009!9.11e-27!65;CL:0000094!8.73e-20!8;CL:0000134!3.73e-14!358;CL:0000081!6.61e-14!11;CL:0002320!1.49e-13!365;CL:0000219!1.90e-11!390;CL:0000048!4.02e-10!430;CL:0000034!6.75e-10!444;CL:0000236!8.28e-10!14;CL:0000723!9.52e-10!436;CL:0000775!8.77e-09!3;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000767!6.27e-08!3;CL:0000842!9.73e-08!3;CL:0000623!6.28e-07!3;CL:0000825!6.28e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.89e-43;8!CL:0000081;5.95e-31;11!CL:0000775;1.78e-22;3!CL:0000860;2.56e-18;33!CL:0002057;2.56e-18;33!CL:0000771;1.03e-15;2!CL:0000473;1.21e-14;39!CL:0000234;1.21e-14;39!CL:0000766;1.95e-12;69!CL:0000576;4.79e-10;48!CL:0000767;5.94e-10;3!CL:0000236;9.93e-09;13!CL:0000763;1.85e-07;100!CL:0000738;8.69e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.27e-43,8;CL:0000081,3.82e-31,11;CL:0000766,1.77e-30,72;CL:0000738,8.66e-25,136;CL:0000775,1.85e-22,3;CL:0000037,2.90e-19,168;CL:0000763,3.37e-19,108;CL:0000049,3.37e-19,108;CL:0002032,2.28e-18,161;CL:0000837,2.28e-18,161;CL:0000988,4.57e-18,177;CL:0000860,1.22e-17,42;CL:0002057,1.22e-17,42;CL:0000771,9.98e-16,2;CL:0000473,3.40e-15,48;CL:0000234,3.40e-15,48;CL:0000839,2.28e-12,66;CL:0000557,3.73e-12,67;CL:0002087,5.37e-12,115;CL:0002194,8.99e-12,59;CL:0000576,8.99e-12,59;CL:0000040,8.99e-12,59;CL:0000559,8.99e-12,59;CL:0002009,2.48e-11,61;CL:0002031,2.54e-11,120;CL:0000767,3.75e-10,3;CL:0000236,3.36e-08,14;CL:0000134,8.35e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-12;42 | |||
|ontology_enrichment_disease=DOID:1036!3.38e-09!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-38!102;UBERON:0003061!2.06e-38!102;UBERON:0002193!8.55e-34!112;UBERON:0002371!4.58e-25!80;UBERON:0001474!1.22e-22!86;UBERON:0004765!7.41e-18!101;UBERON:0001434!7.41e-18!101;UBERON:0002405!9.60e-18!115;UBERON:0000178!8.19e-14!15;UBERON:0000179!8.19e-14!15;UBERON:0000463!8.19e-14!15;UBERON:0002384!9.80e-13!375;UBERON:0003081!4.21e-12!216;UBERON:0002204!2.49e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-07;15!UBERON:0000179;1.29e-07;15!UBERON:0000463;1.29e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-14,98;UBERON:0003061,1.82e-14,98;UBERON:0002193,7.43e-13,108;UBERON:0002371,1.76e-10,76;UBERON:0001474,1.44e-09,82;UBERON:0004765,1.53e-08,90;UBERON:0002405,3.35e-08,93;UBERON:0000178,1.47e-07,15;UBERON:0000179,1.47e-07,15;UBERON:0000463,1.47e-07,15;UBERON:0001434,1.74e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,2.47765096716083,0.28769239232215,0,0.709446689665756,1.03423704220986,3.87290810150296,1.35426486594342,0.752969358170419,0.272906150057846,0.674170453335254,1.53041946185451,1.28371610830437,3.83602275479425,0.659702600373432,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.5644487552606,1.3031330682307,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,1.23561494261145,0.150176892841506,0.48217676009124,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,1.90810750907073,1.70763890732835,4.69789751496751,2.29363936875137,2.64342657158052,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,8.98808428736619,8.97484377612075,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,0.569647187174163,0.238231775457789,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,0.392125068635479,0.335643173951685,0.37950746544837,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0,0,0.697287110717054,0.822335776043652,2.47765096716083,0.28769239232215,0,0.709446689665756,1.03423704220986,3.87290810150296,1.35426486594342,0.752969358170419,0.272906150057846,0.674170453335254,1.53041946185451,1.28371610830437,3.83602275479425,0.659702600373432,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.502497330513487,1.5644487552606,1.3031330682307,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,1.23561494261145,0.150176892841506,0.48217676009124,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,1.90810750907073,1.70763890732835,4.69789751496751,2.29363936875137,2.64342657158052,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,8.98808428736619,8.97484377612075,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,0.569647187174163,0.238231775457789,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,0.392125068635479,0.335643173951685,0.37950746544837,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:134368869..134368912,- | |short_description=p@chr10:134368869..134368912,- | ||
}} | }} |
Latest revision as of 11:47, 23 July 2015
Short description: | p@chr10:134368869..134368912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134368869..134368912, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.27e-43 | 8 |
blood cell | 3.82e-31 | 11 |
myeloid leukocyte | 1.77e-30 | 72 |
leukocyte | 8.66e-25 | 136 |
neutrophil | 1.85e-22 | 3 |
hematopoietic stem cell | 2.90e-19 | 168 |
myeloid cell | 3.37e-19 | 108 |
common myeloid progenitor | 3.37e-19 | 108 |
hematopoietic oligopotent progenitor cell | 2.28e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-18 | 161 |
hematopoietic cell | 4.57e-18 | 177 |
classical monocyte | 1.22e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-17 | 42 |
eosinophil | 9.98e-16 | 2 |
defensive cell | 3.40e-15 | 48 |
phagocyte | 3.40e-15 | 48 |
myeloid lineage restricted progenitor cell | 2.28e-12 | 66 |
granulocyte monocyte progenitor cell | 3.73e-12 | 67 |
nongranular leukocyte | 5.37e-12 | 115 |
monopoietic cell | 8.99e-12 | 59 |
monocyte | 8.99e-12 | 59 |
monoblast | 8.99e-12 | 59 |
promonocyte | 8.99e-12 | 59 |
macrophage dendritic cell progenitor | 2.48e-11 | 61 |
hematopoietic lineage restricted progenitor cell | 2.54e-11 | 120 |
basophil | 3.75e-10 | 3 |
B cell | 3.36e-08 | 14 |
mesenchymal cell | 8.35e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-14 | 98 |
blood island | 1.82e-14 | 98 |
hemolymphoid system | 7.43e-13 | 108 |
bone marrow | 1.76e-10 | 76 |
bone element | 1.44e-09 | 82 |
skeletal element | 1.53e-08 | 90 |
immune system | 3.35e-08 | 93 |
blood | 1.47e-07 | 15 |
haemolymphatic fluid | 1.47e-07 | 15 |
organism substance | 1.47e-07 | 15 |
skeletal system | 1.74e-07 | 100 |