FFCP PHASE1:Hg19::chr10:13342181..13342207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:13342181..13342207,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr10:13342181..13342207,+ | |description=CAGE_peak_at_chr10:13342181..13342207,+ | ||
|id=chr10:13342181..13342207,+ | |id=chr10:13342181..13342207,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.02e-15!140;CL:0002057!1.65e-14!42;CL:0000860!5.30e-14!45;CL:0002031!3.17e-13!124;CL:0002087!6.29e-12!119;CL:0000037!2.30e-11!172;CL:0000566!2.30e-11!172;CL:0000988!3.01e-11!182;CL:0000557!1.49e-10!71;CL:0000766!8.92e-10!76;CL:0000839!8.97e-10!70;CL:0002032!1.20e-09!165;CL:0000837!1.20e-09!165;CL:0002009!1.85e-09!65;CL:0002194!1.58e-08!63;CL:0000576!1.58e-08!63;CL:0000040!1.58e-08!63;CL:0000559!1.58e-08!63;CL:0000763!7.85e-07!112;CL:0000049!7.85e-07!112 | |ontology_enrichment_celltype=CL:0000738!8.02e-15!140;CL:0002057!1.65e-14!42;CL:0000860!5.30e-14!45;CL:0002031!3.17e-13!124;CL:0002087!6.29e-12!119;CL:0000037!2.30e-11!172;CL:0000566!2.30e-11!172;CL:0000988!3.01e-11!182;CL:0000557!1.49e-10!71;CL:0000766!8.92e-10!76;CL:0000839!8.97e-10!70;CL:0002032!1.20e-09!165;CL:0000837!1.20e-09!165;CL:0002009!1.85e-09!65;CL:0002194!1.58e-08!63;CL:0000576!1.58e-08!63;CL:0000040!1.58e-08!63;CL:0000559!1.58e-08!63;CL:0000763!7.85e-07!112;CL:0000049!7.85e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.45e-11;3!CL:0000624;1.42e-09;6!CL:0000815;5.30e-08;2!CL:0000792;5.30e-08;2!CL:0002677;5.30e-08;2!CL:0000097;8.38e-08;5!CL:0000860;6.42e-07;33!CL:0002057;6.42e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.24e-13,120;CL:0000738,1.56e-13,136;CL:0000623,7.96e-12,3;CL:0000825,7.96e-12,3;CL:0002087,1.56e-11,115;CL:0000037,1.32e-10,168;CL:0000557,7.87e-10,67;CL:0000988,9.96e-10,177;CL:0000860,1.73e-09,42;CL:0002057,1.73e-09,42;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0000624,2.03e-09,6;CL:0000839,1.30e-08,66;CL:0000815,3.48e-08,2;CL:0000792,3.48e-08,2;CL:0002677,3.48e-08,2;CL:0000473,5.39e-08,48;CL:0000234,5.39e-08,48;CL:0000097,8.46e-08,5;CL:0002028,8.46e-08,5;CL:0000766,1.23e-07,72;CL:0002009,8.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.94e-11!102;UBERON:0003061!5.94e-11!102;UBERON:0002371!1.37e-10!80;UBERON:0002405!2.78e-10!115;UBERON:0002193!4.03e-10!112;UBERON:0001474!6.05e-09!86;UBERON:0004765!8.30e-07!101;UBERON:0001434!8.30e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!5.94e-11!102;UBERON:0003061!5.94e-11!102;UBERON:0002371!1.37e-10!80;UBERON:0002405!2.78e-10!115;UBERON:0002193!4.03e-10!112;UBERON:0001474!6.05e-09!86;UBERON:0004765!8.30e-07!101;UBERON:0001434!8.30e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.43e-09,98;UBERON:0003061,1.43e-09,98;UBERON:0002193,2.83e-08,108;UBERON:0002371,2.92e-08,76;UBERON:0002405,4.01e-08,93;UBERON:0001474,2.07e-07,82 | |||
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| ||
|short_description=p@chr10:13342181..13342207,+ | |short_description=p@chr10:13342181..13342207,+ | ||
}} | }} |
Latest revision as of 11:43, 23 July 2015
Short description: | p@chr10:13342181..13342207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13342181..13342207, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.24e-13 | 120 |
leukocyte | 1.56e-13 | 136 |
natural killer cell | 7.96e-12 | 3 |
pro-NK cell | 7.96e-12 | 3 |
nongranular leukocyte | 1.56e-11 | 115 |
hematopoietic stem cell | 1.32e-10 | 168 |
granulocyte monocyte progenitor cell | 7.87e-10 | 67 |
hematopoietic cell | 9.96e-10 | 177 |
classical monocyte | 1.73e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-09 | 42 |
hematopoietic oligopotent progenitor cell | 1.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-09 | 161 |
CD4-positive, alpha-beta T cell | 2.03e-09 | 6 |
myeloid lineage restricted progenitor cell | 1.30e-08 | 66 |
regulatory T cell | 3.48e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.48e-08 | 2 |
naive regulatory T cell | 3.48e-08 | 2 |
defensive cell | 5.39e-08 | 48 |
phagocyte | 5.39e-08 | 48 |
mast cell | 8.46e-08 | 5 |
basophil mast progenitor cell | 8.46e-08 | 5 |
myeloid leukocyte | 1.23e-07 | 72 |
macrophage dendritic cell progenitor | 8.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.43e-09 | 98 |
blood island | 1.43e-09 | 98 |
hemolymphoid system | 2.83e-08 | 108 |
bone marrow | 2.92e-08 | 76 |
immune system | 4.01e-08 | 93 |
bone element | 2.07e-07 | 82 |