FFCP PHASE1:Hg19::chr10:131634104..131634108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:131634104..131634108,- | |||
|description=CAGE_peak_at_chr10:131634104..131634108,- | |description=CAGE_peak_at_chr10:131634104..131634108,- | ||
|id=chr10:131634104..131634108,- | |id=chr10:131634104..131634108,- | ||
|ontology_enrichment_celltype=CL:0002334!2.20e-09!12;CL:0000055!4.79e-09!180;CL:0000188!5.02e-09!9;CL:0000136!9.42e-09!15;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000057!6.00e-07!75 | |ontology_enrichment_celltype=CL:0002334!2.20e-09!12;CL:0000055!4.79e-09!180;CL:0000188!5.02e-09!9;CL:0000136!9.42e-09!15;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000057!6.00e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000214;6.83e-36;3!CL:0002582;1.61e-16;3!CL:0002591;5.06e-13;1!CL:0000153;2.06e-12;9!CL:0000447;2.06e-12;9!CL:0000327;1.17e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.85e-36,3;CL:0002582,3.25e-16,3;CL:0002591,6.06e-13,1;CL:0000153,1.34e-12,9;CL:0000447,1.34e-12,9;CL:0000327,9.07e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;3.81e-07;2!DOID:4236;3.81e-07;2!DOID:1909;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.70e-07,2;DOID:154,4.98e-07,2;DOID:4236,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.88e-07!61;UBERON:0002036!1.88e-07!61;UBERON:0003082!1.88e-07!61;UBERON:0000010!2.21e-07!8;UBERON:0000486!2.55e-07!82;UBERON:0002385!4.99e-07!63;UBERON:0001015!4.99e-07!63;UBERON:0000383!4.99e-07!63;UBERON:0004290!5.28e-07!70;UBERON:0000914!6.31e-07!83;UBERON:0002329!6.31e-07!83;UBERON:0003077!6.31e-07!83;UBERON:0003059!6.31e-07!83;UBERON:0007282!6.31e-07!83;UBERON:0009618!6.31e-07!83;UBERON:0007285!6.31e-07!83 | |ontology_enrichment_uberon=UBERON:0001134!1.88e-07!61;UBERON:0002036!1.88e-07!61;UBERON:0003082!1.88e-07!61;UBERON:0000010!2.21e-07!8;UBERON:0000486!2.55e-07!82;UBERON:0002385!4.99e-07!63;UBERON:0001015!4.99e-07!63;UBERON:0000383!4.99e-07!63;UBERON:0004290!5.28e-07!70;UBERON:0000914!6.31e-07!83;UBERON:0002329!6.31e-07!83;UBERON:0003077!6.31e-07!83;UBERON:0003059!6.31e-07!83;UBERON:0007282!6.31e-07!83;UBERON:0009618!6.31e-07!83;UBERON:0007285!6.31e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.83e-36;3!UBERON:0007616;6.83e-36;3!UBERON:0002217;6.83e-36;3!UBERON:0002018;6.83e-36;3!UBERON:0004905;6.86e-14;8!UBERON:0000982;6.86e-14;8!UBERON:0004770;6.86e-14;8!UBERON:0007195;5.06e-13;1!UBERON:0004457;2.06e-12;9!UBERON:0000042;2.06e-12;9!UBERON:0000486;1.90e-09;12!UBERON:0000078;3.81e-07;2!UBERON:0002012;3.81e-07;2!UBERON:0008886;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.85e-36,3;UBERON:0007616,1.85e-36,3;UBERON:0002217,1.85e-36,3;UBERON:0002018,1.85e-36,3;UBERON:0004905,4.23e-14,8;UBERON:0000982,4.23e-14,8;UBERON:0004770,4.23e-14,8;UBERON:0007195,6.82e-13,1;UBERON:0004457,1.38e-09,12;UBERON:0000042,1.38e-09,12;UBERON:0000078,4.17e-07,2;UBERON:0007497,4.17e-07,2;UBERON:0003643,4.17e-07,2;UBERON:0003504,4.17e-07,2;UBERON:0003469,4.17e-07,2;UBERON:0003496,4.17e-07,2;UBERON:0002012,4.17e-07,2;UBERON:0008886,4.17e-07,2;UBERON:0007303,4.17e-07,2;UBERON:0002061,4.17e-07,2;UBERON:0005432,4.17e-07,2;UBERON:0004363,4.17e-07,2 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.618831764800233,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.768834895534206,0,0,0,0.616838775210622,0.355123450626254,0.246381468041427,1.03850885836724,1.04589340613963,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.534192213880424,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,2.53329162357197,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,1.14117339516596,0.156679895773023,0,0.169291777801603,0.963528450622197,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,1.37897349296586,0,1.04174996959975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,1.14186133417987,0,0,0.434763085832475,0.447764408660622,0.233713309847224,0,0.568209015825267,0.50313580350515,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0.686791410365586,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.383683113910955,1.61737217095023,0.314531883711793,0.109209638192014,0.848662649770126,0,2.35477952092104,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.695433089210318,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,1.57771562193185,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.404234377916439,0.435433495793923,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.618831764800233,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.817309515567294,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.768834895534206,0,0,0,0.616838775210622,0.355123450626254,0.246381468041427,1.03850885836724,1.04589340613963,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.534192213880424,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,2.53329162357197,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,1.14117339516596,0.156679895773023,0,0.169291777801603,0.963528450622197,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,1.37897349296586,0,1.04174996959975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,1.14186133417987,0,0,0.434763085832475,0.447764408660622,0.233713309847224,0,0.568209015825267,0.50313580350515,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0.686791410365586,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.383683113910955,1.61737217095023,0.314531883711793,0.109209638192014,0.848662649770126,0,2.35477952092104,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.695433089210318,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,1.57771562193185,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.404234377916439,0.435433495793923,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:131634104..131634108,- | |short_description=p@chr10:131634104..131634108,- | ||
}} | }} |
Latest revision as of 11:41, 23 July 2015
Short description: | p@chr10:131634104..131634108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:131634104..131634108, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.85e-36 | 3 |
visceral preadipocyte | 3.25e-16 | 3 |
smooth muscle cell of the pulmonary artery | 6.06e-13 | 1 |
GAG secreting cell | 1.34e-12 | 9 |
carbohydrate secreting cell | 1.34e-12 | 9 |
extracellular matrix secreting cell | 9.07e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.85e-36 | 3 |
layer of synovial tissue | 1.85e-36 | 3 |
synovial joint | 1.85e-36 | 3 |
synovial membrane of synovial joint | 1.85e-36 | 3 |
articulation | 4.23e-14 | 8 |
skeletal joint | 4.23e-14 | 8 |
articular system | 4.23e-14 | 8 |
stroma of bone marrow | 6.82e-13 | 1 |
cavity lining | 1.38e-09 | 12 |
serous membrane | 1.38e-09 | 12 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.17e-07 | 2 |
developing epithelial placode | 4.17e-07 | 2 |
respiratory system arterial blood vessel | 4.17e-07 | 2 |
respiratory system blood vessel | 4.17e-07 | 2 |
respiratory system artery | 4.17e-07 | 2 |
head blood vessel | 4.17e-07 | 2 |
pulmonary artery | 4.17e-07 | 2 |
pulmonary vascular system | 4.17e-07 | 2 |
pharyngeal vasculature | 4.17e-07 | 2 |
truncus arteriosus | 4.17e-07 | 2 |
aortic sac | 4.17e-07 | 2 |
pharyngeal arch artery | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.70e-07 | 2 |
mixed cell type cancer | 4.98e-07 | 2 |
carcinosarcoma | 4.98e-07 | 2 |