FFCP PHASE1:Hg19::chr10:129858156..129858180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129858156..129858180,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:129858156..129858180,+ | |description=CAGE_peak_at_chr10:129858156..129858180,+ | ||
|id=chr10:129858156..129858180,+ | |id=chr10:129858156..129858180,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.89e-38!140;CL:0000037!9.61e-37!172;CL:0000566!9.61e-37!172;CL:0002087!4.10e-34!119;CL:0002032!5.75e-34!165;CL:0000837!5.75e-34!165;CL:0000766!7.01e-33!76;CL:0000988!5.86e-32!182;CL:0002031!6.84e-30!124;CL:0002057!4.56e-29!42;CL:0002194!1.13e-28!63;CL:0000576!1.13e-28!63;CL:0000040!1.13e-28!63;CL:0000559!1.13e-28!63;CL:0002009!2.38e-28!65;CL:0000763!1.69e-27!112;CL:0000049!1.69e-27!112;CL:0000860!3.07e-26!45;CL:0000557!4.67e-26!71;CL:0000839!1.80e-25!70;CL:0002393!2.18e-07!9;CL:0002397!2.18e-07!9;CL:0000094!2.60e-07!8 | |ontology_enrichment_celltype=CL:0000738!6.89e-38!140;CL:0000037!9.61e-37!172;CL:0000566!9.61e-37!172;CL:0002087!4.10e-34!119;CL:0002032!5.75e-34!165;CL:0000837!5.75e-34!165;CL:0000766!7.01e-33!76;CL:0000988!5.86e-32!182;CL:0002031!6.84e-30!124;CL:0002057!4.56e-29!42;CL:0002194!1.13e-28!63;CL:0000576!1.13e-28!63;CL:0000040!1.13e-28!63;CL:0000559!1.13e-28!63;CL:0002009!2.38e-28!65;CL:0000763!1.69e-27!112;CL:0000049!1.69e-27!112;CL:0000860!3.07e-26!45;CL:0000557!4.67e-26!71;CL:0000839!1.80e-25!70;CL:0002393!2.18e-07!9;CL:0002397!2.18e-07!9;CL:0000094!2.60e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-35;33!CL:0002057;1.02e-35;33!CL:0000473;1.33e-34;39!CL:0000234;1.33e-34;39!CL:0000576;1.76e-27;48!CL:0000766;1.88e-22;69!CL:0000763;1.90e-13;100!CL:0000094;7.77e-12;8!CL:0000738;1.67e-11;136!CL:0002087;2.96e-11;104!CL:0002393;3.05e-09;6!CL:0002397;3.05e-09;6!CL:0000988;1.78e-08;177!CL:0000081;5.21e-08;11!CL:0000235;7.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.55e-58,72;CL:0000473,3.53e-55,48;CL:0000234,3.53e-55,48;CL:0002194,3.37e-51,59;CL:0000576,3.37e-51,59;CL:0000040,3.37e-51,59;CL:0000559,3.37e-51,59;CL:0002009,3.94e-51,61;CL:0000738,7.79e-51,136;CL:0000860,1.27e-49,42;CL:0002057,1.27e-49,42;CL:0000037,5.53e-48,168;CL:0000557,1.78e-46,67;CL:0000763,1.20e-45,108;CL:0000049,1.20e-45,108;CL:0000839,2.08e-45,66;CL:0000988,5.62e-44,177;CL:0002087,1.02e-43,115;CL:0002032,4.20e-43,161;CL:0000837,4.20e-43,161;CL:0002031,8.13e-39,120;CL:0002393,5.70e-12,9;CL:0002397,5.70e-12,9;CL:0000094,7.76e-12,8;CL:0000134,6.45e-10,354;CL:0002320,2.98e-09,361;CL:0000081,5.20e-08,11;CL:0000219,5.35e-07,386;CL:0000235,7.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-35;42!CL:0000049;2.98e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.22e-27!112;UBERON:0002390!1.44e-27!102;UBERON:0003061!1.44e-27!102;UBERON:0002371!6.35e-22!80;UBERON:0001474!9.39e-19!86;UBERON:0002405!1.04e-17!115;UBERON:0007023!1.01e-16!115;UBERON:0004765!8.54e-15!101;UBERON:0001434!8.54e-15!101;UBERON:0001049!8.25e-13!57;UBERON:0005068!8.25e-13!57;UBERON:0006241!8.25e-13!57;UBERON:0007135!8.25e-13!57;UBERON:0003080!4.40e-10!42;UBERON:0002780!7.42e-10!41;UBERON:0001890!7.42e-10!41;UBERON:0006240!7.42e-10!41;UBERON:0002616!8.03e-10!59;UBERON:0002020!1.76e-08!34;UBERON:0003528!1.76e-08!34;UBERON:0003075!2.24e-08!86;UBERON:0007284!2.24e-08!86;UBERON:0001893!2.75e-08!34;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0002791!4.89e-08!33;UBERON:0001017!8.03e-08!82;UBERON:0005743!9.53e-08!86;UBERON:0001869!1.52e-07!32;UBERON:0002346!3.35e-07!90;UBERON:0000073!4.60e-07!94;UBERON:0001016!4.60e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.03e-08;15!UBERON:0000179;4.03e-08;15!UBERON:0000463;4.03e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.48e-45,98;UBERON:0003061,1.48e-45,98;UBERON:0002193,3.78e-43,108;UBERON:0002371,3.62e-40,76;UBERON:0001474,7.88e-36,82;UBERON:0002405,1.87e-35,93;UBERON:0004765,5.74e-31,90;UBERON:0001434,3.02e-27,100;UBERON:0003081,1.53e-13,203;UBERON:0002204,1.48e-09,167;UBERON:0002384,1.04e-08,371;UBERON:0001049,2.15e-08,56;UBERON:0005068,2.15e-08,56;UBERON:0006241,2.15e-08,56;UBERON:0007135,2.15e-08,56;UBERON:0000178,3.23e-08,15;UBERON:0000179,3.23e-08,15;UBERON:0000463,3.23e-08,15;UBERON:0000073,1.40e-07,53;UBERON:0002616,1.40e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0.687720651731561,0.821005894499457,0.787107813136792,4.32700704533794,3.45446458287491,3.71558695958582,0,0,0,0.387336002901508,0.995184627411951,1.17440175733939,13.8498852132969,69.9900121670795,38.8449458581375,0.671746422719773,0.971680998056939,0,11.341062624806,6.04601509902095,2.66842467306598,14.6430293250581,17.2690512969167,14.865905802965,21.5769294241613,10.5025889676931,3.07426898855161,12.4108445065183,8.39130088658974,5.41705946377367,18.4477492751753,9.82462140208245,2.02251136000576,9.79468455586888,3.53021929783703,12.7867425159808,3.95821560224059,9.17532825059507,8.09827026012119,20.6048559426295,6.24123747160254,3.73693349397345,41.4560297673626,39.1112188815151,4.99534342821768,16.345786571101,3.31449872388808,0.316462387440884,5.49263744411049,10.2050063983221,7.75736988380991,22.016411704713,21.7756494620184,33.2701964462956,1.71007646244749,4.37616689837998,2.73996230646951,0,0,0,0.853460445133014,0,0,0,0,1.70763890732835,2.93618594685469,0.764546456250458,0,2.24203425192614,0.790152254325231,2.55722701147983,5.50215067848831,3.90642848099067,0.83593247695339,0.651844533267181,1.89379122293893,1.94826728407911,0.557052284425868,1.17842362989935,0.886135578334485,3.5204502289452,1.79327847615945,2.60118695119756,2.63100647365882,2.48715016007264,0.289803085735052,0.593146252648242,0.267540828089713,3.1360657141493,0.679856056185397,1.14966148080576,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0,0,9.47551693156242,24.8719382078662,15.7858600232251,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0.283604451492204,0.443458794925128,1.05401742831751,0.130979075497713,0,0,3.24547393654683,4.00498395788315,8.3763515126885,6.43924685624423,2.28797964312051,1.85728750664782,0,0,0.347140501607594,0,0,0.550236083880135,0,0.258416759169329,0,1.00416183829401,0.805658634218294,0,1.22031028774085,0.735326160691737,0,0.535798369704479,0,0.225222960966644,0,0,0.183201743930407,40.8519294051796,54.2892369807656,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0.904760751704678,0.740707561268237,0,0,0,0.115930404975077,0,0.866198686566443,1.85194205030644,1.33177906564219,0.790204397959275,0,1.47730203652438,3.27605971194933,1.18904929830983,0,0.671928512795438,0.283550194484773,1.43293636324557,0.871901815541886,0,0,0,1.03664057770386,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,1.50677127429638,25.3000727379638,0,0,0,0.144781306667579,0,0.358121926479791,0.896681151948218,17.5357376579715,29.1097226060348,37.3478235574068,0.508189248444927,0,0.773288812777695,0,0,107.857011448394,230.354323587099,58.847002907917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5076019592166,6.47142602455851,4.58928498554811,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.368323955743585,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.824328093181778,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,3.31793052485919,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,1.52234282769651,2.29391162142713,3.98753031021914,1.66762242820452,2.46817363851717,3.8908398671563,2.16012574895246,2.37937552888281,0,0,0.245040215981032,0.371606350251437,1.00988449083511,0.995985806877798,0.318852545457645,0.59873811429845,0.766021480529467,6.77355464716425,8.44017044713844,2.24637742490767,2.28234679033192,1.09675927041116,15.038068625404,0.338583555603207,1.2847046008296,0.403599414382095,0.425846237690326,2.74804275804612,0.307240764308458,0.447352215784832,1.16794399198336,0.781552381608161,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,1.02555725490326,0,2.00598091699461,0,0,0.296964680832639,0,0.994147647766298,1.40669416410513,0.445234820091624,0.329607748453519,0,2.98871982376605,0,0,0.102268682502155,0.615424027305347,0,0.539210106883961,0.358042349351218,1.02314474045374,0.295930216910801,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0.709163045303809,0,0,0,0.885741385813839,0.60298219312704,1.52581736317083,1.76926815889959,0.886642856860642,0.219385397153973,0,0.83654246567162,0.307801034015188,0.113942055847001,0.23056390438806,1.07709173291727,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,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| ||
|short_description=p@chr10:129858156..129858180,+ | |short_description=p@chr10:129858156..129858180,+ | ||
}} | }} |
Latest revision as of 11:38, 23 July 2015
Short description: | p@chr10:129858156..129858180, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129858156..129858180, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.55e-58 | 72 |
defensive cell | 3.53e-55 | 48 |
phagocyte | 3.53e-55 | 48 |
monopoietic cell | 3.37e-51 | 59 |
monocyte | 3.37e-51 | 59 |
monoblast | 3.37e-51 | 59 |
promonocyte | 3.37e-51 | 59 |
macrophage dendritic cell progenitor | 3.94e-51 | 61 |
leukocyte | 7.79e-51 | 136 |
classical monocyte | 1.27e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-49 | 42 |
hematopoietic stem cell | 5.53e-48 | 168 |
granulocyte monocyte progenitor cell | 1.78e-46 | 67 |
myeloid cell | 1.20e-45 | 108 |
common myeloid progenitor | 1.20e-45 | 108 |
myeloid lineage restricted progenitor cell | 2.08e-45 | 66 |
hematopoietic cell | 5.62e-44 | 177 |
nongranular leukocyte | 1.02e-43 | 115 |
hematopoietic oligopotent progenitor cell | 4.20e-43 | 161 |
hematopoietic multipotent progenitor cell | 4.20e-43 | 161 |
hematopoietic lineage restricted progenitor cell | 8.13e-39 | 120 |
intermediate monocyte | 5.70e-12 | 9 |
CD14-positive, CD16-positive monocyte | 5.70e-12 | 9 |
granulocyte | 7.76e-12 | 8 |
mesenchymal cell | 6.45e-10 | 354 |
connective tissue cell | 2.98e-09 | 361 |
blood cell | 5.20e-08 | 11 |
motile cell | 5.35e-07 | 386 |
macrophage | 7.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.48e-45 | 98 |
blood island | 1.48e-45 | 98 |
hemolymphoid system | 3.78e-43 | 108 |
bone marrow | 3.62e-40 | 76 |
bone element | 7.88e-36 | 82 |
immune system | 1.87e-35 | 93 |
skeletal element | 5.74e-31 | 90 |
skeletal system | 3.02e-27 | 100 |
lateral plate mesoderm | 1.53e-13 | 203 |
musculoskeletal system | 1.48e-09 | 167 |
connective tissue | 1.04e-08 | 371 |
neural tube | 2.15e-08 | 56 |
neural rod | 2.15e-08 | 56 |
future spinal cord | 2.15e-08 | 56 |
neural keel | 2.15e-08 | 56 |
blood | 3.23e-08 | 15 |
haemolymphatic fluid | 3.23e-08 | 15 |
organism substance | 3.23e-08 | 15 |
regional part of nervous system | 1.40e-07 | 53 |
regional part of brain | 1.40e-07 | 53 |