FFCP PHASE1:Hg19::chr10:129846762..129846773,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129846762..129846773,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:129846762..129846773,+ | |description=CAGE_peak_at_chr10:129846762..129846773,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.04e-81!42;CL:0000766!7.90e-77!76;CL:0000860!1.14e-75!45;CL:0002194!3.52e-57!63;CL:0000576!3.52e-57!63;CL:0000040!3.52e-57!63;CL:0000559!3.52e-57!63;CL:0002009!3.62e-55!65;CL:0000738!3.06e-54!140;CL:0000839!1.09e-53!70;CL:0000557!8.17e-53!71;CL:0000763!6.61e-49!112;CL:0000049!6.61e-49!112;CL:0000037!4.92e-42!172;CL:0000566!4.92e-42!172;CL:0002087!5.44e-42!119;CL:0002032!1.78e-40!165;CL:0000837!1.78e-40!165;CL:0000988!4.29e-39!182;CL:0002031!7.81e-38!124;CL:0000094!1.81e-27!8;CL:0000081!1.41e-19!11;CL:0000134!5.25e-15!358;CL:0002320!1.72e-14!365;CL:0000219!1.13e-12!390;CL:0000775!6.86e-12!3;CL:0000767!1.55e-10!3;CL:0000048!1.67e-10!430;CL:0000723!3.38e-10!436;CL:0000034!8.45e-10!444;CL:0000771!1.58e-08!2 | |ontology_enrichment_celltype=CL:0002057!1.04e-81!42;CL:0000766!7.90e-77!76;CL:0000860!1.14e-75!45;CL:0002194!3.52e-57!63;CL:0000576!3.52e-57!63;CL:0000040!3.52e-57!63;CL:0000559!3.52e-57!63;CL:0002009!3.62e-55!65;CL:0000738!3.06e-54!140;CL:0000839!1.09e-53!70;CL:0000557!8.17e-53!71;CL:0000763!6.61e-49!112;CL:0000049!6.61e-49!112;CL:0000037!4.92e-42!172;CL:0000566!4.92e-42!172;CL:0002087!5.44e-42!119;CL:0002032!1.78e-40!165;CL:0000837!1.78e-40!165;CL:0000988!4.29e-39!182;CL:0002031!7.81e-38!124;CL:0000094!1.81e-27!8;CL:0000081!1.41e-19!11;CL:0000134!5.25e-15!358;CL:0002320!1.72e-14!365;CL:0000219!1.13e-12!390;CL:0000775!6.86e-12!3;CL:0000767!1.55e-10!3;CL:0000048!1.67e-10!430;CL:0000723!3.38e-10!436;CL:0000034!8.45e-10!444;CL:0000771!1.58e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.91e-71;33!CL:0002057;2.91e-71;33!CL:0000473;5.68e-53;39!CL:0000234;5.68e-53;39!CL:0000576;1.76e-33;48!CL:0000766;3.12e-27;69!CL:0000094;1.04e-26;8!CL:0000775;2.07e-26;3!CL:0000081;2.08e-19;11!CL:0000771;3.75e-18;2!CL:0000763;2.37e-15;100!CL:0002087;2.01e-10;104!CL:0000738;4.68e-08;136!CL:0000219;8.01e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;2.91e-71;33!CL:0002057;2.91e-71;33!CL:0000473;5.68e-53;39!CL:0000234;5.68e-53;39!CL:0000576;1.76e-33;48!CL:0000766;3.12e-27;69!CL:0000094;1.04e-26;8!CL:0000775;2.07e-26;3!CL:0000081;2.08e-19;11!CL:0000771;3.75e-18;2!CL:0000763;2.37e-15;100!CL:0002087;2.01e-10;104!CL:0000738;4.68e-08;136!CL:0000219;8.01e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-60,42;CL:0002057,1.50e-60,42;CL:0000766,7.59e-57,72;CL:0000473,1.27e-52,48;CL:0000234,1.27e-52,48;CL:0002194,1.63e-41,59;CL:0000576,1.63e-41,59;CL:0000040,1.63e-41,59;CL:0000559,1.63e-41,59;CL:0002009,4.43e-40,61;CL:0000763,5.57e-37,108;CL:0000049,5.57e-37,108;CL:0000839,7.22e-37,66;CL:0000557,2.78e-36,67;CL:0000738,9.92e-29,136;CL:0000094,9.84e-27,8;CL:0000775,2.46e-26,3;CL:0002032,9.16e-24,161;CL:0000837,9.16e-24,161;CL:0000037,1.23e-22,168;CL:0000988,2.58e-21,177;CL:0002087,5.13e-20,115;CL:0000081,2.00e-19,11;CL:0002031,4.62e-19,120;CL:0000771,2.90e-18,2;CL:0000134,7.24e-09,354;CL:0002320,1.27e-08,361;CL:0000219,9.30e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.25e-45;42!CL:0000049;5.99e-10;108 | |ontology_enrichment_development_v019=CL:0002057;7.25e-45;42!CL:0000049;5.99e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.85e-48!102;UBERON:0003061!3.85e-48!102;UBERON:0002371!6.65e-46!80;UBERON:0002193!2.49e-45!112;UBERON:0001474!4.31e-42!86;UBERON:0004765!1.57e-34!101;UBERON:0001434!1.57e-34!101;UBERON:0002405!4.74e-33!115;UBERON:0002204!1.46e-18!167;UBERON:0003081!1.97e-17!216;UBERON:0002384!8.69e-14!375 | |ontology_enrichment_uberon=UBERON:0002390!3.85e-48!102;UBERON:0003061!3.85e-48!102;UBERON:0002371!6.65e-46!80;UBERON:0002193!2.49e-45!112;UBERON:0001474!4.31e-42!86;UBERON:0004765!1.57e-34!101;UBERON:0001434!1.57e-34!101;UBERON:0002405!4.74e-33!115;UBERON:0002204!1.46e-18!167;UBERON:0003081!1.97e-17!216;UBERON:0002384!8.69e-14!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.08e-31,76;UBERON:0001474,3.48e-29,82;UBERON:0002390,6.13e-27,98;UBERON:0003061,6.13e-27,98;UBERON:0004765,2.36e-26,90;UBERON:0002405,2.04e-25,93;UBERON:0002193,3.53e-24,108;UBERON:0001434,1.92e-23,100;UBERON:0002204,7.42e-13,167;UBERON:0003081,2.08e-11,203;UBERON:0002384,2.75e-08,371 | |||
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|short_description=p@chr10:129846762..129846773,+ | |short_description=p@chr10:129846762..129846773,+ | ||
}} | }} |
Latest revision as of 11:37, 23 July 2015
Short description: | p@chr10:129846762..129846773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129846762..129846773, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-60 | 42 |
myeloid leukocyte | 7.59e-57 | 72 |
defensive cell | 1.27e-52 | 48 |
phagocyte | 1.27e-52 | 48 |
monopoietic cell | 1.63e-41 | 59 |
monocyte | 1.63e-41 | 59 |
monoblast | 1.63e-41 | 59 |
promonocyte | 1.63e-41 | 59 |
macrophage dendritic cell progenitor | 4.43e-40 | 61 |
myeloid cell | 5.57e-37 | 108 |
common myeloid progenitor | 5.57e-37 | 108 |
myeloid lineage restricted progenitor cell | 7.22e-37 | 66 |
granulocyte monocyte progenitor cell | 2.78e-36 | 67 |
leukocyte | 9.92e-29 | 136 |
granulocyte | 9.84e-27 | 8 |
neutrophil | 2.46e-26 | 3 |
hematopoietic oligopotent progenitor cell | 9.16e-24 | 161 |
hematopoietic multipotent progenitor cell | 9.16e-24 | 161 |
hematopoietic stem cell | 1.23e-22 | 168 |
hematopoietic cell | 2.58e-21 | 177 |
nongranular leukocyte | 5.13e-20 | 115 |
blood cell | 2.00e-19 | 11 |
hematopoietic lineage restricted progenitor cell | 4.62e-19 | 120 |
eosinophil | 2.90e-18 | 2 |
mesenchymal cell | 7.24e-09 | 354 |
connective tissue cell | 1.27e-08 | 361 |
motile cell | 9.30e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.08e-31 | 76 |
bone element | 3.48e-29 | 82 |
hematopoietic system | 6.13e-27 | 98 |
blood island | 6.13e-27 | 98 |
skeletal element | 2.36e-26 | 90 |
immune system | 2.04e-25 | 93 |
hemolymphoid system | 3.53e-24 | 108 |
skeletal system | 1.92e-23 | 100 |
musculoskeletal system | 7.42e-13 | 167 |
lateral plate mesoderm | 2.08e-11 | 203 |
connective tissue | 2.75e-08 | 371 |