FFCP PHASE1:Hg19::chr10:126423550..126423555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126423550..126423555,- | |||
|coexpression_cluster_id=C1569 | |coexpression_cluster_id=C1569 | ||
|description=CAGE_peak_at_chr10:126423550..126423555,- | |description=CAGE_peak_at_chr10:126423550..126423555,- | ||
|id=chr10:126423550..126423555,- | |id=chr10:126423550..126423555,- | ||
|ontology_enrichment_celltype=CL:0000838!2.77e-31!52;CL:0000542!1.48e-30!53;CL:0000051!1.48e-30!53;CL:0000084!1.03e-19!25;CL:0000827!1.03e-19!25;CL:0000791!2.46e-17!18;CL:0000789!2.46e-17!18;CL:0002420!2.46e-17!18;CL:0002419!2.46e-17!18;CL:0000790!2.46e-17!18;CL:0000738!3.21e-16!140;CL:0000625!1.13e-15!11;CL:0002087!5.90e-14!119;CL:0000037!1.46e-12!172;CL:0000566!1.46e-12!172;CL:0000988!2.19e-11!182;CL:0002031!5.21e-11!124;CL:0000945!1.35e-10!24;CL:0000826!1.35e-10!24;CL:0000784!1.39e-10!3;CL:0000236!9.62e-10!14;CL:0002032!7.84e-09!165;CL:0000837!7.84e-09!165 | |ontology_enrichment_celltype=CL:0000838!2.77e-31!52;CL:0000542!1.48e-30!53;CL:0000051!1.48e-30!53;CL:0000084!1.03e-19!25;CL:0000827!1.03e-19!25;CL:0000791!2.46e-17!18;CL:0000789!2.46e-17!18;CL:0002420!2.46e-17!18;CL:0002419!2.46e-17!18;CL:0000790!2.46e-17!18;CL:0000738!3.21e-16!140;CL:0000625!1.13e-15!11;CL:0002087!5.90e-14!119;CL:0000037!1.46e-12!172;CL:0000566!1.46e-12!172;CL:0000988!2.19e-11!182;CL:0002031!5.21e-11!124;CL:0000945!1.35e-10!24;CL:0000826!1.35e-10!24;CL:0000784!1.39e-10!3;CL:0000236!9.62e-10!14;CL:0002032!7.84e-09!165;CL:0000837!7.84e-09!165 | ||
|ontology_enrichment_celltype_v019=CL:0000784;9.33e-35;3!CL:0002032;2.75e-12;1!CL:0000557;2.75e-12;1!CL:0000451;6.27e-10;10!CL:0000542;8.37e-09;53!CL:0000236;3.79e-08;13!CL:0000945;1.59e-07;24!CL:0000084;2.50e-07;25!CL:0000815;9.01e-07;2!CL:0000792;9.01e-07;2!CL:0002677;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.90e-35,3;CL:0000838,1.20e-12,52;CL:0000542,2.15e-12,53;CL:0000051,2.15e-12,53;CL:0000451,6.37e-10,10;CL:0000738,2.85e-08,136;CL:0000037,9.58e-08,168;CL:0000236,1.37e-07,14;CL:0000945,1.62e-07,24;CL:0000826,1.62e-07,24;CL:0000084,2.48e-07,25;CL:0000827,2.48e-07,25;CL:0000988,2.90e-07,177;CL:0000815,9.54e-07,2;CL:0000792,9.54e-07,2;CL:0002677,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;8.37e-09;53!UBERON:0006965;9.01e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.75e-12;1!DOID:0070004;2.75e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.75e-12,1;DOID:0070004,2.75e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.79e-10!7;UBERON:0002370!1.24e-07!4;UBERON:0005058!1.24e-07!4;UBERON:0009113!1.24e-07!4;UBERON:0003295!1.24e-07!4;UBERON:0005562!1.24e-07!4;UBERON:0003408!1.71e-07!10;UBERON:0001042!2.32e-07!10;UBERON:0009145!2.32e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!2.79e-10!7;UBERON:0002370!1.24e-07!4;UBERON:0005058!1.24e-07!4;UBERON:0009113!1.24e-07!4;UBERON:0003295!1.24e-07!4;UBERON:0005562!1.24e-07!4;UBERON:0003408!1.71e-07!10;UBERON:0001042!2.32e-07!10;UBERON:0009145!2.32e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.01e-23;2!UBERON:0005058;1.01e-23;2!UBERON:0009113;1.01e-23;2!UBERON:0004177;4.55e-10;5!UBERON:0005057;4.55e-10;5!UBERON:0002390;1.20e-07;32!UBERON:0002405;7.82e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.20e-12,4;UBERON:0005058,2.20e-12,4;UBERON:0009113,2.20e-12,4;UBERON:0003295,2.20e-12,4;UBERON:0005562,2.20e-12,4;UBERON:0003408,8.64e-11,10;UBERON:0003351,1.50e-08,6;UBERON:0004177,1.90e-07,7;UBERON:0005057,1.90e-07,7 | |||
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| ||
|short_description=p@chr10:126423550..126423555,- | |short_description=p@chr10:126423550..126423555,- | ||
}} | }} |
Latest revision as of 11:23, 23 July 2015
Short description: | p@chr10:126423550..126423555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126423550..126423555, - |
Coexpression cluster: | C1569_Dendritic_thymus_Hodgkin_acute_granulocyte_chronic_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.90e-35 | 3 |
lymphoid lineage restricted progenitor cell | 1.20e-12 | 52 |
lymphocyte | 2.15e-12 | 53 |
common lymphoid progenitor | 2.15e-12 | 53 |
dendritic cell | 6.37e-10 | 10 |
leukocyte | 2.85e-08 | 136 |
hematopoietic stem cell | 9.58e-08 | 168 |
B cell | 1.37e-07 | 14 |
lymphocyte of B lineage | 1.62e-07 | 24 |
pro-B cell | 1.62e-07 | 24 |
T cell | 2.48e-07 | 25 |
pro-T cell | 2.48e-07 | 25 |
hematopoietic cell | 2.90e-07 | 177 |
regulatory T cell | 9.54e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.54e-07 | 2 |
naive regulatory T cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.20e-12 | 4 |
hemolymphoid system gland | 2.20e-12 | 4 |
thymic region | 2.20e-12 | 4 |
pharyngeal gland | 2.20e-12 | 4 |
thymus primordium | 2.20e-12 | 4 |
gland of gut | 8.64e-11 | 10 |
pharyngeal epithelium | 1.50e-08 | 6 |
hemopoietic organ | 1.90e-07 | 7 |
immune organ | 1.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.75e-12 | 1 |
myeloma | 2.75e-12 | 1 |