FFCP PHASE1:Hg19::chr10:125851350..125851364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125851350..125851364,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:125851350..125851364,+ | |description=CAGE_peak_at_chr10:125851350..125851364,+ | ||
|id=chr10:125851350..125851364,+ | |id=chr10:125851350..125851364,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.04e-41!42;CL:0000860!6.97e-38!45;CL:0000766!2.17e-37!76;CL:0002194!1.06e-27!63;CL:0000576!1.06e-27!63;CL:0000040!1.06e-27!63;CL:0000559!1.06e-27!63;CL:0000839!1.76e-27!70;CL:0000557!5.83e-27!71;CL:0002009!1.41e-26!65;CL:0000738!1.55e-23!140;CL:0002393!4.50e-22!9;CL:0002397!4.50e-22!9;CL:0000763!9.00e-22!112;CL:0000049!9.00e-22!112;CL:0002087!6.44e-17!119;CL:0000037!8.35e-17!172;CL:0000566!8.35e-17!172;CL:0000988!3.33e-15!182;CL:0002031!1.64e-14!124;CL:0002032!5.88e-14!165;CL:0000837!5.88e-14!165;CL:0000094!1.37e-11!8;CL:0000775!7.94e-09!3;CL:0000875!1.87e-08!3;CL:0002396!1.87e-08!3;CL:0000081!3.70e-08!11;CL:0000842!8.88e-08!3 | |ontology_enrichment_celltype=CL:0002057!3.04e-41!42;CL:0000860!6.97e-38!45;CL:0000766!2.17e-37!76;CL:0002194!1.06e-27!63;CL:0000576!1.06e-27!63;CL:0000040!1.06e-27!63;CL:0000559!1.06e-27!63;CL:0000839!1.76e-27!70;CL:0000557!5.83e-27!71;CL:0002009!1.41e-26!65;CL:0000738!1.55e-23!140;CL:0002393!4.50e-22!9;CL:0002397!4.50e-22!9;CL:0000763!9.00e-22!112;CL:0000049!9.00e-22!112;CL:0002087!6.44e-17!119;CL:0000037!8.35e-17!172;CL:0000566!8.35e-17!172;CL:0000988!3.33e-15!182;CL:0002031!1.64e-14!124;CL:0002032!5.88e-14!165;CL:0000837!5.88e-14!165;CL:0000094!1.37e-11!8;CL:0000775!7.94e-09!3;CL:0000875!1.87e-08!3;CL:0002396!1.87e-08!3;CL:0000081!3.70e-08!11;CL:0000842!8.88e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.64e-45;8!CL:0002393;2.58e-41;6!CL:0002397;2.58e-41;6!CL:0000081;4.89e-33;11!CL:0000775;1.43e-31;3!CL:0000771;1.38e-21;2!CL:0000766;3.70e-16;69!CL:0000576;1.36e-15;48!CL:0000875;4.13e-14;3!CL:0002396;4.13e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.35e-53,9;CL:0002397,1.35e-53,9;CL:0000094,2.07e-45,8;CL:0000766,5.15e-37,72;CL:0000081,5.79e-33,11;CL:0000775,1.44e-31,3;CL:0000860,8.32e-27,42;CL:0002057,8.32e-27,42;CL:0000763,5.30e-24,108;CL:0000049,5.30e-24,108;CL:0000473,2.90e-23,48;CL:0000234,2.90e-23,48;CL:0000771,1.38e-21,2;CL:0000738,4.91e-21,136;CL:0002194,2.68e-18,59;CL:0000576,2.68e-18,59;CL:0000040,2.68e-18,59;CL:0000559,2.68e-18,59;CL:0002009,1.17e-17,61;CL:0000037,1.45e-16,168;CL:0000839,3.20e-16,66;CL:0000557,5.85e-16,67;CL:0000988,1.35e-15,177;CL:0002032,2.46e-15,161;CL:0000837,2.46e-15,161;CL:0000875,2.77e-14,3;CL:0002396,2.77e-14,3;CL:0002087,2.01e-10,115;CL:0002031,2.97e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-19;42!CL:0000049;4.60e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.60e-26!102;UBERON:0003061!8.60e-26!102;UBERON:0002193!8.94e-24!112;UBERON:0002371!7.09e-23!80;UBERON:0001474!1.24e-20!86;UBERON:0004765!9.02e-19!101;UBERON:0001434!9.02e-19!101;UBERON:0002405!4.18e-15!115;UBERON:0000200!9.27e-13!6;UBERON:0001950!4.95e-12!20;UBERON:0001893!1.03e-11!34;UBERON:0002204!2.16e-11!167;UBERON:0001869!5.12e-11!32;UBERON:0002619!9.47e-11!22;UBERON:0002791!1.48e-10!33;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0000956!3.34e-09!25;UBERON:0000203!3.34e-09!25;UBERON:0002780!4.02e-09!41;UBERON:0001890!4.02e-09!41;UBERON:0006240!4.02e-09!41;UBERON:0000955!7.07e-09!69;UBERON:0006238!7.07e-09!69;UBERON:0003080!7.99e-09!42;UBERON:0002616!6.23e-08!59;UBERON:0007023!7.14e-08!115;UBERON:0001017!1.80e-07!82;UBERON:0001049!2.55e-07!57;UBERON:0005068!2.55e-07!57;UBERON:0006241!2.55e-07!57;UBERON:0007135!2.55e-07!57;UBERON:0003081!2.79e-07!216;UBERON:0002771!4.96e-07!3;UBERON:0005743!6.75e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!8.60e-26!102;UBERON:0003061!8.60e-26!102;UBERON:0002193!8.94e-24!112;UBERON:0002371!7.09e-23!80;UBERON:0001474!1.24e-20!86;UBERON:0004765!9.02e-19!101;UBERON:0001434!9.02e-19!101;UBERON:0002405!4.18e-15!115;UBERON:0000200!9.27e-13!6;UBERON:0001950!4.95e-12!20;UBERON:0001893!1.03e-11!34;UBERON:0002204!2.16e-11!167;UBERON:0001869!5.12e-11!32;UBERON:0002619!9.47e-11!22;UBERON:0002791!1.48e-10!33;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0000956!3.34e-09!25;UBERON:0000203!3.34e-09!25;UBERON:0002780!4.02e-09!41;UBERON:0001890!4.02e-09!41;UBERON:0006240!4.02e-09!41;UBERON:0000955!7.07e-09!69;UBERON:0006238!7.07e-09!69;UBERON:0003080!7.99e-09!42;UBERON:0002616!6.23e-08!59;UBERON:0007023!7.14e-08!115;UBERON:0001017!1.80e-07!82;UBERON:0001049!2.55e-07!57;UBERON:0005068!2.55e-07!57;UBERON:0006241!2.55e-07!57;UBERON:0007135!2.55e-07!57;UBERON:0003081!2.79e-07!216;UBERON:0002771!4.96e-07!3;UBERON:0005743!6.75e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.65e-15,98;UBERON:0003061,7.65e-15,98;UBERON:0002371,6.61e-14,76;UBERON:0002193,2.68e-13,108;UBERON:0001474,8.76e-13,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0001434,3.25e-10,100 | |||
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|short_description=p@chr10:125851350..125851364,+ | |short_description=p@chr10:125851350..125851364,+ | ||
}} | }} |
Latest revision as of 11:19, 23 July 2015
Short description: | p@chr10:125851350..125851364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125851350..125851364, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.35e-53 | 9 |
CD14-positive, CD16-positive monocyte | 1.35e-53 | 9 |
granulocyte | 2.07e-45 | 8 |
myeloid leukocyte | 5.15e-37 | 72 |
blood cell | 5.79e-33 | 11 |
neutrophil | 1.44e-31 | 3 |
classical monocyte | 8.32e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-27 | 42 |
myeloid cell | 5.30e-24 | 108 |
common myeloid progenitor | 5.30e-24 | 108 |
defensive cell | 2.90e-23 | 48 |
phagocyte | 2.90e-23 | 48 |
eosinophil | 1.38e-21 | 2 |
leukocyte | 4.91e-21 | 136 |
monopoietic cell | 2.68e-18 | 59 |
monocyte | 2.68e-18 | 59 |
monoblast | 2.68e-18 | 59 |
promonocyte | 2.68e-18 | 59 |
macrophage dendritic cell progenitor | 1.17e-17 | 61 |
hematopoietic stem cell | 1.45e-16 | 168 |
myeloid lineage restricted progenitor cell | 3.20e-16 | 66 |
granulocyte monocyte progenitor cell | 5.85e-16 | 67 |
hematopoietic cell | 1.35e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.46e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.46e-15 | 161 |
non-classical monocyte | 2.77e-14 | 3 |
CD14-low, CD16-positive monocyte | 2.77e-14 | 3 |
nongranular leukocyte | 2.01e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.97e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.65e-15 | 98 |
blood island | 7.65e-15 | 98 |
bone marrow | 6.61e-14 | 76 |
hemolymphoid system | 2.68e-13 | 108 |
bone element | 8.76e-13 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 4.26e-11 | 93 |
skeletal system | 3.25e-10 | 100 |