FFCP PHASE1:Hg19::chr10:125756841..125756870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125756841..125756870,- | |||
|coexpression_cluster_id=C192 | |||
|description=CAGE_peak_at_chr10:125756841..125756870,- | |description=CAGE_peak_at_chr10:125756841..125756870,- | ||
|id=chr10:125756841..125756870,- | |id=chr10:125756841..125756870,- | ||
|ontology_enrichment_celltype=CL:0000766!8.59e-43!76;CL:0002057!2.18e-42!42;CL:0000860!3.22e-39!45;CL:0000738!1.90e-29!140;CL:0002194!9.60e-29!63;CL:0000576!9.60e-29!63;CL:0000040!9.60e-29!63;CL:0000559!9.60e-29!63;CL:0002009!1.04e-27!65;CL:0000094!1.29e-27!8;CL:0000763!5.65e-27!112;CL:0000049!5.65e-27!112;CL:0000839!2.20e-25!70;CL:0000557!5.87e-25!71;CL:0000037!1.39e-22!172;CL:0000566!1.39e-22!172;CL:0000988!6.27e-21!182;CL:0000081!8.12e-20!11;CL:0002087!4.52e-19!119;CL:0002032!1.50e-17!165;CL:0000837!1.50e-17!165;CL:0000775!4.88e-15!3;CL:0000842!4.30e-14!3;CL:0000767!4.92e-14!3;CL:0002031!1.79e-13!124;CL:0002393!8.42e-13!9;CL:0002397!8.42e-13!9;CL:0000224!1.09e-10!4;CL:0000134!6.68e-10!358;CL:0002320!1.48e-09!365;CL:0000219!4.54e-09!390;CL:0000034!9.69e-08!444;CL:0000048!1.50e-07!430;CL:0000723!2.47e-07!436;CL:0000080!2.90e-07!6 | |ontology_enrichment_celltype=CL:0000766!8.59e-43!76;CL:0002057!2.18e-42!42;CL:0000860!3.22e-39!45;CL:0000738!1.90e-29!140;CL:0002194!9.60e-29!63;CL:0000576!9.60e-29!63;CL:0000040!9.60e-29!63;CL:0000559!9.60e-29!63;CL:0002009!1.04e-27!65;CL:0000094!1.29e-27!8;CL:0000763!5.65e-27!112;CL:0000049!5.65e-27!112;CL:0000839!2.20e-25!70;CL:0000557!5.87e-25!71;CL:0000037!1.39e-22!172;CL:0000566!1.39e-22!172;CL:0000988!6.27e-21!182;CL:0000081!8.12e-20!11;CL:0002087!4.52e-19!119;CL:0002032!1.50e-17!165;CL:0000837!1.50e-17!165;CL:0000775!4.88e-15!3;CL:0000842!4.30e-14!3;CL:0000767!4.92e-14!3;CL:0002031!1.79e-13!124;CL:0002393!8.42e-13!9;CL:0002397!8.42e-13!9;CL:0000224!1.09e-10!4;CL:0000134!6.68e-10!358;CL:0002320!1.48e-09!365;CL:0000219!4.54e-09!390;CL:0000034!9.69e-08!444;CL:0000048!1.50e-07!430;CL:0000723!2.47e-07!436;CL:0000080!2.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.53e-41;8!CL:0000775;7.10e-41;3!CL:0000081;2.91e-30;11!CL:0002393;5.75e-21;6!CL:0002397;5.75e-21;6!CL:0000766;6.81e-18;69!CL:0000860;4.58e-14;33!CL:0002057;4.58e-14;33!CL:0000576;1.79e-12;48!CL:0000473;1.08e-09;39!CL:0000234;1.08e-09;39!CL:0000763;8.74e-09;100!CL:0000771;5.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.05e-41,8;CL:0000775,8.70e-41,3;CL:0000766,4.87e-34,72;CL:0000081,3.60e-30,11;CL:0000860,1.44e-24,42;CL:0002057,1.44e-24,42;CL:0000763,2.41e-22,108;CL:0000049,2.41e-22,108;CL:0000473,2.16e-21,48;CL:0000234,2.16e-21,48;CL:0000738,2.98e-20,136;CL:0002194,6.14e-17,59;CL:0000576,6.14e-17,59;CL:0000040,6.14e-17,59;CL:0000559,6.14e-17,59;CL:0002009,2.31e-16,61;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0000839,4.50e-15,66;CL:0000557,7.73e-15,67;CL:0002032,1.51e-14,161;CL:0000837,1.51e-14,161;CL:0002393,3.32e-14,9;CL:0002397,3.32e-14,9;CL:0002087,2.71e-10,115;CL:0000771,5.02e-08,2;CL:0002031,6.57e-08,120;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.77e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.35e-21!80;UBERON:0002390!2.59e-21!102;UBERON:0003061!2.59e-21!102;UBERON:0002193!1.11e-20!112;UBERON:0001474!9.67e-20!86;UBERON:0004765!9.09e-18!101;UBERON:0001434!9.09e-18!101;UBERON:0002405!1.76e-16!115;UBERON:0002384!7.46e-10!375;UBERON:0002204!1.05e-08!167;UBERON:0003081!6.79e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.40e-13,76;UBERON:0002390,2.94e-12,98;UBERON:0003061,2.94e-12,98;UBERON:0001474,5.50e-12,82;UBERON:0002193,4.99e-11,108;UBERON:0004765,7.58e-11,90;UBERON:0002405,1.81e-10,93;UBERON:0001434,1.13e-09,100 | |||
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|short_description=p@chr10:125756841..125756870,- | |short_description=p@chr10:125756841..125756870,- | ||
}} | }} |
Latest revision as of 11:18, 23 July 2015
Short description: | p@chr10:125756841..125756870, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125756841..125756870, - |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.05e-41 | 8 |
neutrophil | 8.70e-41 | 3 |
myeloid leukocyte | 4.87e-34 | 72 |
blood cell | 3.60e-30 | 11 |
classical monocyte | 1.44e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-24 | 42 |
myeloid cell | 2.41e-22 | 108 |
common myeloid progenitor | 2.41e-22 | 108 |
defensive cell | 2.16e-21 | 48 |
phagocyte | 2.16e-21 | 48 |
leukocyte | 2.98e-20 | 136 |
monopoietic cell | 6.14e-17 | 59 |
monocyte | 6.14e-17 | 59 |
monoblast | 6.14e-17 | 59 |
promonocyte | 6.14e-17 | 59 |
macrophage dendritic cell progenitor | 2.31e-16 | 61 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
myeloid lineage restricted progenitor cell | 4.50e-15 | 66 |
granulocyte monocyte progenitor cell | 7.73e-15 | 67 |
hematopoietic oligopotent progenitor cell | 1.51e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-14 | 161 |
intermediate monocyte | 3.32e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.32e-14 | 9 |
nongranular leukocyte | 2.71e-10 | 115 |
eosinophil | 5.02e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 6.57e-08 | 120 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.40e-13 | 76 |
hematopoietic system | 2.94e-12 | 98 |
blood island | 2.94e-12 | 98 |
bone element | 5.50e-12 | 82 |
hemolymphoid system | 4.99e-11 | 108 |
skeletal element | 7.58e-11 | 90 |
immune system | 1.81e-10 | 93 |
skeletal system | 1.13e-09 | 100 |