FFCP PHASE1:Hg19::chr10:123313149..123313152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123313149..123313152,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr10:123313149..123313152,+ | |description=CAGE_peak_at_chr10:123313149..123313152,+ | ||
|id=chr10:123313149..123313152,+ | |id=chr10:123313149..123313152,+ | ||
|ontology_enrichment_celltype=CL:0002327!4.51e-27!4;CL:0000066!3.44e-07!254;CL:0002253!3.48e-07!2;CL:0000223!8.87e-07!59;CL:0002076!9.12e-07!43 | |ontology_enrichment_celltype=CL:0002327!4.51e-27!4;CL:0000066!3.44e-07!254;CL:0002253!3.48e-07!2;CL:0000223!8.87e-07!59;CL:0002076!9.12e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!3.89e-25!2;DOID:299!8.65e-17!25;DOID:3111!3.33e-13!1;DOID:3603!3.33e-13!1;DOID:305!5.07e-12!106;DOID:0050687!1.60e-08!143;DOID:1749!3.96e-08!14;DOID:4468!3.28e-07!2 | |ontology_enrichment_disease=DOID:3493!3.89e-25!2;DOID:299!8.65e-17!25;DOID:3111!3.33e-13!1;DOID:3603!3.33e-13!1;DOID:305!5.07e-12!106;DOID:0050687!1.60e-08!143;DOID:1749!3.96e-08!14;DOID:4468!3.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0001911!4.51e-27!4;UBERON:0005333!4.51e-27!4;UBERON:0008425!4.51e-27!4;UBERON:0005311!4.51e-27!4;UBERON:0000076!7.18e-14!8;UBERON:0003100!5.73e-10!41;UBERON:0000344!2.20e-09!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr10:123313149..123313152,+ | |short_description=p@chr10:123313149..123313152,+ | ||
}} | }} |
Latest revision as of 11:06, 23 July 2015
Short description: | p@chr10:123313149..123313152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123313149..123313152, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |