FFCP PHASE1:Hg19::chr10:121154442..121154449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:121154442..121154449,- | |||
|coexpression_cluster_id=C273 | |||
|description=CAGE_peak_at_chr10:121154442..121154449,- | |description=CAGE_peak_at_chr10:121154442..121154449,- | ||
|id=chr10:121154442..121154449,- | |id=chr10:121154442..121154449,- | ||
|ontology_enrichment_celltype=CL:0002057!2.77e-99!42;CL:0000860!3.31e-92!45;CL:0000766!6.16e-67!76;CL:0002194!8.78e-63!63;CL:0000576!8.78e-63!63;CL:0000040!8.78e-63!63;CL:0000559!8.78e-63!63;CL:0002009!1.14e-60!65;CL:0000839!6.56e-56!70;CL:0000557!4.89e-55!71;CL:0000763!6.23e-46!112;CL:0000049!6.23e-46!112;CL:0000738!1.57e-37!140;CL:0002087!1.03e-34!119;CL:0000037!5.26e-31!172;CL:0000566!5.26e-31!172;CL:0002031!7.52e-31!124;CL:0002032!1.06e-30!165;CL:0000837!1.06e-30!165;CL:0000988!6.99e-29!182;CL:0000775!1.45e-15!3;CL:0000134!1.02e-11!358;CL:0002320!2.45e-11!365;CL:0000094!5.19e-10!8;CL:0000219!5.34e-10!390;CL:0000048!3.47e-09!430;CL:0000723!6.04e-09!436;CL:0000034!1.23e-08!444;CL:0000081!2.77e-07!11 | |ontology_enrichment_celltype=CL:0002057!2.77e-99!42;CL:0000860!3.31e-92!45;CL:0000766!6.16e-67!76;CL:0002194!8.78e-63!63;CL:0000576!8.78e-63!63;CL:0000040!8.78e-63!63;CL:0000559!8.78e-63!63;CL:0002009!1.14e-60!65;CL:0000839!6.56e-56!70;CL:0000557!4.89e-55!71;CL:0000763!6.23e-46!112;CL:0000049!6.23e-46!112;CL:0000738!1.57e-37!140;CL:0002087!1.03e-34!119;CL:0000037!5.26e-31!172;CL:0000566!5.26e-31!172;CL:0002031!7.52e-31!124;CL:0002032!1.06e-30!165;CL:0000837!1.06e-30!165;CL:0000988!6.99e-29!182;CL:0000775!1.45e-15!3;CL:0000134!1.02e-11!358;CL:0002320!2.45e-11!365;CL:0000094!5.19e-10!8;CL:0000219!5.34e-10!390;CL:0000048!3.47e-09!430;CL:0000723!6.04e-09!436;CL:0000034!1.23e-08!444;CL:0000081!2.77e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-47;33!CL:0002057;3.40e-47;33!CL:0000473;2.62e-33;39!CL:0000234;2.62e-33;39!CL:0000576;3.96e-30;48!CL:0000766;3.07e-29;69!CL:0000775;2.28e-27;3!CL:0000094;7.14e-18;8!CL:0002393;2.45e-13;6!CL:0002397;2.45e-13;6!CL:0000081;4.63e-13;11!CL:0000763;5.17e-13;100!CL:0002087;3.09e-10;104!CL:0000738;9.41e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-56,42;CL:0002057,1.16e-56,42;CL:0000766,2.79e-49,72;CL:0000473,3.01e-49,48;CL:0000234,3.01e-49,48;CL:0002194,7.36e-39,59;CL:0000576,7.36e-39,59;CL:0000040,7.36e-39,59;CL:0000559,7.36e-39,59;CL:0002009,1.61e-37,61;CL:0000839,1.63e-34,66;CL:0000557,5.75e-34,67;CL:0000763,5.46e-32,108;CL:0000049,5.46e-32,108;CL:0000775,1.91e-27,3;CL:0000738,8.33e-25,136;CL:0002032,1.76e-20,161;CL:0000837,1.76e-20,161;CL:0000037,1.69e-19,168;CL:0002087,9.45e-19,115;CL:0000988,2.39e-18,177;CL:0000094,6.01e-18,8;CL:0002031,7.38e-18,120;CL:0000081,4.09e-13,11;CL:0002393,4.77e-09,9;CL:0002397,4.77e-09,9;CL:0000134,1.69e-07,354;CL:0002320,2.77e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.49e-46;42!CL:0000049;9.49e-12;108!UBERON:0005425;7.54e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.77e-48!80;UBERON:0001474!2.38e-44!86;UBERON:0002390!5.76e-39!102;UBERON:0003061!5.76e-39!102;UBERON:0004765!8.38e-37!101;UBERON:0001434!8.38e-37!101;UBERON:0002193!6.89e-35!112;UBERON:0002405!1.61e-31!115;UBERON:0002204!1.31e-19!167;UBERON:0003081!9.25e-15!216;UBERON:0002384!8.07e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!3.77e-48!80;UBERON:0001474!2.38e-44!86;UBERON:0002390!5.76e-39!102;UBERON:0003061!5.76e-39!102;UBERON:0004765!8.38e-37!101;UBERON:0001434!8.38e-37!101;UBERON:0002193!6.89e-35!112;UBERON:0002405!1.61e-31!115;UBERON:0002204!1.31e-19!167;UBERON:0003081!9.25e-15!216;UBERON:0002384!8.07e-11!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.54e-10;1!UBERON:0001785;7.54e-10;1!UBERON:0002464;7.54e-10;1!UBERON:0004904;7.54e-10;1!UBERON:0001021;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.13e-29,76;UBERON:0001474,2.50e-27,82;UBERON:0004765,1.11e-24,90;UBERON:0002405,8.39e-24,93;UBERON:0002390,1.85e-22,98;UBERON:0003061,1.85e-22,98;UBERON:0001434,5.87e-22,100;UBERON:0002193,3.88e-20,108;UBERON:0002204,4.72e-12,167;UBERON:0000941,5.79e-10,1;UBERON:0001785,5.79e-10,1;UBERON:0002464,5.79e-10,1;UBERON:0004904,5.79e-10,1;UBERON:0001021,5.79e-10,1;UBERON:0003902,5.79e-10,1;UBERON:0005425,5.79e-10,1;UBERON:0003081,2.09e-09,203;UBERON:0002384,5.42e-07,371 | |||
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|short_description=p@chr10:121154442..121154449,- | |short_description=p@chr10:121154442..121154449,- | ||
}} | }} |
Latest revision as of 10:59, 23 July 2015
Short description: | p@chr10:121154442..121154449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121154442..121154449, - |
Coexpression cluster: | C273_Neutrophils_CD14_Eosinophils_Monocytederived_CD4_Natural_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.16e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-56 | 42 |
myeloid leukocyte | 2.79e-49 | 72 |
defensive cell | 3.01e-49 | 48 |
phagocyte | 3.01e-49 | 48 |
monopoietic cell | 7.36e-39 | 59 |
monocyte | 7.36e-39 | 59 |
monoblast | 7.36e-39 | 59 |
promonocyte | 7.36e-39 | 59 |
macrophage dendritic cell progenitor | 1.61e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.63e-34 | 66 |
granulocyte monocyte progenitor cell | 5.75e-34 | 67 |
myeloid cell | 5.46e-32 | 108 |
common myeloid progenitor | 5.46e-32 | 108 |
neutrophil | 1.91e-27 | 3 |
leukocyte | 8.33e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-20 | 161 |
hematopoietic stem cell | 1.69e-19 | 168 |
nongranular leukocyte | 9.45e-19 | 115 |
hematopoietic cell | 2.39e-18 | 177 |
granulocyte | 6.01e-18 | 8 |
hematopoietic lineage restricted progenitor cell | 7.38e-18 | 120 |
blood cell | 4.09e-13 | 11 |
intermediate monocyte | 4.77e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.77e-09 | 9 |
mesenchymal cell | 1.69e-07 | 354 |
connective tissue cell | 2.77e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.13e-29 | 76 |
bone element | 2.50e-27 | 82 |
skeletal element | 1.11e-24 | 90 |
immune system | 8.39e-24 | 93 |
hematopoietic system | 1.85e-22 | 98 |
blood island | 1.85e-22 | 98 |
skeletal system | 5.87e-22 | 100 |
hemolymphoid system | 3.88e-20 | 108 |
musculoskeletal system | 4.72e-12 | 167 |
cranial nerve II | 5.79e-10 | 1 |
cranial nerve | 5.79e-10 | 1 |
nerve trunk | 5.79e-10 | 1 |
nerve connecting eye with brain | 5.79e-10 | 1 |
nerve | 5.79e-10 | 1 |
retinal neural layer | 5.79e-10 | 1 |
presumptive neural retina | 5.79e-10 | 1 |
lateral plate mesoderm | 2.09e-09 | 203 |
connective tissue | 5.42e-07 | 371 |