FFCP PHASE1:Hg19::chr10:118674914..118674932,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:118674914..118674932,-
|short_description=p@chr10:118674914..118674932,-
|description=CAGE_peak_at_chr10:118674914..118674932,-
|association_with_transcri...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:118674914..118674932,- | |||
|description=CAGE_peak_at_chr10:118674914..118674932,- | |||
|id=chr10:118674914..118674932,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.59e-12;2!CL:0000242;2.59e-12;2!CL:0002541;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.59e-12,2;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.28e-23;1!UBERON:0003056;1.21e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.51e-24!57;UBERON:0005068!9.51e-24!57;UBERON:0006241!9.51e-24!57;UBERON:0007135!9.51e-24!57;UBERON:0000955!4.67e-21!69;UBERON:0006238!4.67e-21!69;UBERON:0001017!4.72e-21!82;UBERON:0005743!1.99e-20!86;UBERON:0002346!1.16e-19!90;UBERON:0002616!1.42e-19!59;UBERON:0000073!6.17e-19!94;UBERON:0001016!6.17e-19!94;UBERON:0002780!8.41e-19!41;UBERON:0001890!8.41e-19!41;UBERON:0006240!8.41e-19!41;UBERON:0003075!3.98e-18!86;UBERON:0007284!3.98e-18!86;UBERON:0002020!4.19e-18!34;UBERON:0003528!4.19e-18!34;UBERON:0003080!4.19e-18!42;UBERON:0001893!1.91e-17!34;UBERON:0002791!4.82e-17!33;UBERON:0001869!1.51e-15!32;UBERON:0000924!1.66e-14!173;UBERON:0006601!1.66e-14!173;UBERON:0000956!2.71e-14!25;UBERON:0000203!2.71e-14!25;UBERON:0003056!8.58e-14!61;UBERON:0000033!1.60e-13!123;UBERON:0000153!2.44e-13!129;UBERON:0007811!2.44e-13!129;UBERON:0004121!2.66e-13!169;UBERON:0001950!1.48e-12!20;UBERON:0002619!1.74e-12!22;UBERON:0007023!4.79e-10!115;UBERON:0000062!2.12e-08!511;UBERON:0001871!4.60e-07!7;UBERON:0003076!7.35e-07!15;UBERON:0003057!7.35e-07!15;UBERON:0004732!7.88e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.28e-23;1!UBERON:0001785;3.28e-23;1!UBERON:0002464;3.28e-23;1!UBERON:0004904;3.28e-23;1!UBERON:0001021;3.28e-23;1!UBERON:0002771;1.48e-12;2!UBERON:0001897;2.59e-12;2!UBERON:0003714;2.59e-12;2!UBERON:0005162;2.59e-12;2!UBERON:0000122;2.59e-12;2!UBERON:0010225;2.59e-12;2!UBERON:0001950;3.80e-10;20!UBERON:0002619;2.55e-09;22!UBERON:0003124;1.21e-08;3!UBERON:0000920;1.21e-08;3!UBERON:0000956;2.59e-08;25!UBERON:0000203;2.59e-08;25!UBERON:0002791;6.21e-07;32!UBERON:0001869;6.21e-07;32!UBERON:0002780;7.50e-07;41!UBERON:0001890;7.50e-07;41!UBERON:0002784;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.62e-23,1;UBERON:0001785,2.62e-23,1;UBERON:0002464,2.62e-23,1;UBERON:0004904,2.62e-23,1;UBERON:0001021,2.62e-23,1;UBERON:0003902,2.62e-23,1;UBERON:0005425,2.62e-23,1;UBERON:0002771,1.48e-12,2;UBERON:0003714,2.32e-12,2;UBERON:0005162,2.32e-12,2;UBERON:0000122,2.32e-12,2;UBERON:0001897,3.62e-12,2;UBERON:0010225,3.62e-12,2;UBERON:0001950,3.68e-10,20;UBERON:0002619,2.48e-09,22;UBERON:0003056,4.64e-09,61;UBERON:0002780,8.67e-09,41;UBERON:0001890,8.67e-09,41;UBERON:0003080,8.67e-09,41;UBERON:0006240,8.67e-09,41;UBERON:0001016,1.25e-08,89;UBERON:0000920,1.40e-08,3;UBERON:0000956,2.52e-08,25;UBERON:0000203,2.52e-08,25;UBERON:0000955,4.74e-08,68;UBERON:0006238,4.74e-08,68;UBERON:0010371,1.56e-07,104;UBERON:0000073,6.62e-07,53;UBERON:0002616,6.62e-07,53;UBERON:0001781,8.14e-07,4;UBERON:0001017,8.39e-07,81;UBERON:0003075,8.61e-07,82;UBERON:0007284,8.61e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.527533956456907,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0.251932747854276,0.409074730008619,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.927680981618513,1.99613798001194,0.260427761085233,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0,0.471807930864739,0,0.468528891450678,0,0,0.242780379534093,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0,0,0.83088067605837,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0.775697738169303,0.66116300871345,0,0,0,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,3.41673541725497,0.250381861413,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0.470531639396343,1.40500471742064,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.76872455576384,0,0.303859956177382,0.414775308455192,0.194860308839388,0,0,0.655219697692825,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.247871528518004,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.638535436228605,1.43581454968528,0.756215088665154,0,0.322951291263702,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0.236387681767936,0,0,0.157115589916002,0.280272163313789,0,0.431855182437243,0.47775168788705,0,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0.955538938977433,0.223710863595585,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.917458566809082,0.860037498908708,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.275684698604535,0,0,0,0.829169439458779,1.03432995861895,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.190941474834495,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.527533956456907,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0.251932747854276,0.409074730008619,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.927680981618513,1.99613798001194,0.260427761085233,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0,0.471807930864739,0,0.468528891450678,0,0,0.242780379534093,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0.272406812223151,0,0,0.83088067605837,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0.775697738169303,0.66116300871345,0,0,0,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,3.41673541725497,0.250381861413,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0.470531639396343,1.40500471742064,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.76872455576384,0,0.303859956177382,0.414775308455192,0.194860308839388,0,0,0.655219697692825,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.247871528518004,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.638535436228605,1.43581454968528,0.756215088665154,0,0.322951291263702,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0.0675375846183947,0.781078098613847,1.2401207790071,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0.236387681767936,0,0,0.157115589916002,0.280272163313789,0,0.431855182437243,0.47775168788705,0,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0.955538938977433,0.223710863595585,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0.917458566809082,0.860037498908708,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.275684698604535,0,0,0,0.829169439458779,1.03432995861895,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.190941474834495,0,0.217716747896961,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr10:118674914..118674932,- | |||
}} | }} |
Latest revision as of 10:48, 23 July 2015
Short description: | p@chr10:118674914..118674932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:118674914..118674932, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.59e-12 | 2 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.62e-23 | 1 |
cranial nerve | 2.62e-23 | 1 |
nerve trunk | 2.62e-23 | 1 |
nerve connecting eye with brain | 2.62e-23 | 1 |
nerve | 2.62e-23 | 1 |
retinal neural layer | 2.62e-23 | 1 |
presumptive neural retina | 2.62e-23 | 1 |
middle temporal gyrus | 1.48e-12 | 2 |
neural tissue | 2.32e-12 | 2 |
multi cell component structure | 2.32e-12 | 2 |
neuron projection bundle | 2.32e-12 | 2 |
dorsal plus ventral thalamus | 3.62e-12 | 2 |
thalamic complex | 3.62e-12 | 2 |
neocortex | 3.68e-10 | 20 |
regional part of cerebral cortex | 2.48e-09 | 22 |
pre-chordal neural plate | 4.64e-09 | 61 |
regional part of forebrain | 8.67e-09 | 41 |
forebrain | 8.67e-09 | 41 |
anterior neural tube | 8.67e-09 | 41 |
future forebrain | 8.67e-09 | 41 |
nervous system | 1.25e-08 | 89 |
egg chorion | 1.40e-08 | 3 |
cerebral cortex | 2.52e-08 | 25 |
pallium | 2.52e-08 | 25 |
brain | 4.74e-08 | 68 |
future brain | 4.74e-08 | 68 |
ecto-epithelium | 1.56e-07 | 104 |
regional part of nervous system | 6.62e-07 | 53 |
regional part of brain | 6.62e-07 | 53 |
layer of retina | 8.14e-07 | 4 |
central nervous system | 8.39e-07 | 81 |
neural plate | 8.61e-07 | 82 |
presumptive neural plate | 8.61e-07 | 82 |