FFCP PHASE1:Hg19::chr10:115440857..115440877,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115440857..115440877,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:115440857..115440877,+ | |description=CAGE_peak_at_chr10:115440857..115440877,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!5.41e-58!140;CL:0002057!1.32e-53!42;CL:0002087!8.01e-50!119;CL:0000860!2.19e-49!45;CL:0002031!1.16e-48!124;CL:0000037!1.25e-47!172;CL:0000566!1.25e-47!172;CL:0000988!8.79e-46!182;CL:0002032!5.92e-41!165;CL:0000837!5.92e-41!165;CL:0000557!2.20e-40!71;CL:0002009!2.65e-40!65;CL:0000766!2.45e-39!76;CL:0002194!1.13e-36!63;CL:0000576!1.13e-36!63;CL:0000040!1.13e-36!63;CL:0000559!1.13e-36!63;CL:0000839!3.59e-36!70;CL:0000763!1.58e-29!112;CL:0000049!1.58e-29!112;CL:0002393!2.05e-22!9;CL:0002397!2.05e-22!9;CL:0000134!4.86e-16!358;CL:0002320!2.04e-15!365;CL:0000219!3.15e-13!390;CL:0000048!1.25e-10!430;CL:0000838!1.64e-10!52;CL:0000034!1.92e-10!444;CL:0000723!2.92e-10!436;CL:0000542!3.13e-10!53;CL:0000051!3.13e-10!53;CL:0000842!3.62e-09!3;CL:0000623!6.96e-09!3;CL:0000825!6.96e-09!3;CL:0000767!1.89e-08!3;CL:0000875!8.87e-08!3;CL:0002396!8.87e-08!3;CL:0000451!1.11e-07!10;CL:0000080!2.24e-07!6;CL:0000840!3.97e-07!5;CL:0001029!3.97e-07!5;CL:0000224!6.13e-07!4;CL:0000990!8.95e-07!8 | |ontology_enrichment_celltype=CL:0000738!5.41e-58!140;CL:0002057!1.32e-53!42;CL:0002087!8.01e-50!119;CL:0000860!2.19e-49!45;CL:0002031!1.16e-48!124;CL:0000037!1.25e-47!172;CL:0000566!1.25e-47!172;CL:0000988!8.79e-46!182;CL:0002032!5.92e-41!165;CL:0000837!5.92e-41!165;CL:0000557!2.20e-40!71;CL:0002009!2.65e-40!65;CL:0000766!2.45e-39!76;CL:0002194!1.13e-36!63;CL:0000576!1.13e-36!63;CL:0000040!1.13e-36!63;CL:0000559!1.13e-36!63;CL:0000839!3.59e-36!70;CL:0000763!1.58e-29!112;CL:0000049!1.58e-29!112;CL:0002393!2.05e-22!9;CL:0002397!2.05e-22!9;CL:0000134!4.86e-16!358;CL:0002320!2.04e-15!365;CL:0000219!3.15e-13!390;CL:0000048!1.25e-10!430;CL:0000838!1.64e-10!52;CL:0000034!1.92e-10!444;CL:0000723!2.92e-10!436;CL:0000542!3.13e-10!53;CL:0000051!3.13e-10!53;CL:0000842!3.62e-09!3;CL:0000623!6.96e-09!3;CL:0000825!6.96e-09!3;CL:0000767!1.89e-08!3;CL:0000875!8.87e-08!3;CL:0002396!8.87e-08!3;CL:0000451!1.11e-07!10;CL:0000080!2.24e-07!6;CL:0000840!3.97e-07!5;CL:0001029!3.97e-07!5;CL:0000224!6.13e-07!4;CL:0000990!8.95e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000226;1.23e-25;3!CL:0000842;1.23e-25;3!CL:0000623;1.58e-25;3!CL:0002393;2.05e-23;6!CL:0002397;2.05e-23;6!CL:0002087;2.02e-14;104!CL:0000576;4.60e-14;48!CL:0000860;1.15e-13;33!CL:0002057;1.15e-13;33!CL:0000473;1.35e-09;39!CL:0000234;1.35e-09;39!CL:0000766;3.60e-09;69 | |ontology_enrichment_celltype_v019=CL:0000226;1.23e-25;3!CL:0000842;1.23e-25;3!CL:0000623;1.58e-25;3!CL:0002393;2.05e-23;6!CL:0002397;2.05e-23;6!CL:0002087;2.02e-14;104!CL:0000576;4.60e-14;48!CL:0000860;1.15e-13;33!CL:0002057;1.15e-13;33!CL:0000473;1.35e-09;39!CL:0000234;1.35e-09;39!CL:0000766;3.60e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.43e-28,115;CL:0000860,7.98e-27,42;CL:0002057,7.98e-27,42;CL:0000738,4.90e-26,136;CL:0000226,6.81e-26,3;CL:0000842,6.81e-26,3;CL:0000623,5.54e-25,3;CL:0000825,5.54e-25,3;CL:0000473,3.19e-23,48;CL:0000234,3.19e-23,48;CL:0002194,2.07e-21,59;CL:0000576,2.07e-21,59;CL:0000040,2.07e-21,59;CL:0000559,2.07e-21,59;CL:0002009,1.20e-20,61;CL:0000037,1.87e-20,168;CL:0000766,4.42e-20,72;CL:0000988,3.03e-19,177;CL:0002031,3.21e-19,120;CL:0000839,6.11e-19,66;CL:0000557,1.25e-18,67;CL:0002393,1.01e-15,9;CL:0002397,1.01e-15,9;CL:0002032,2.38e-15,161;CL:0000837,2.38e-15,161;CL:0000763,1.22e-12,108;CL:0000049,1.22e-12,108;CL:0000134,7.74e-08,354;CL:0002320,1.30e-07,361;CL:0000219,8.04e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.04e-17;42 | |ontology_enrichment_development_v019=CL:0002057;7.04e-17;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.64e-37!80;UBERON:0002390!5.32e-36!102;UBERON:0003061!5.32e-36!102;UBERON:0001474!1.96e-33!86;UBERON:0002193!2.45e-33!112;UBERON:0004765!6.93e-27!101;UBERON:0001434!6.93e-27!101;UBERON:0002405!1.16e-23!115;UBERON:0002384!2.69e-15!375;UBERON:0003081!4.15e-15!216;UBERON:0002204!3.88e-13!167 | |ontology_enrichment_uberon=UBERON:0002371!9.64e-37!80;UBERON:0002390!5.32e-36!102;UBERON:0003061!5.32e-36!102;UBERON:0001474!1.96e-33!86;UBERON:0002193!2.45e-33!112;UBERON:0004765!6.93e-27!101;UBERON:0001434!6.93e-27!101;UBERON:0002405!1.16e-23!115;UBERON:0002384!2.69e-15!375;UBERON:0003081!4.15e-15!216;UBERON:0002204!3.88e-13!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-09;15!UBERON:0000179;3.55e-09;15!UBERON:0000463;3.55e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-09;15!UBERON:0000179;3.55e-09;15!UBERON:0000463;3.55e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-21,98;UBERON:0003061,1.36e-21,98;UBERON:0002193,2.43e-19,108;UBERON:0002371,3.44e-16,76;UBERON:0001474,7.41e-15,82;UBERON:0004765,2.37e-13,90;UBERON:0002405,7.46e-13,93;UBERON:0001434,8.32e-12,100;UBERON:0000178,3.12e-09,15;UBERON:0000179,3.12e-09,15;UBERON:0000463,3.12e-09,15;UBERON:0003081,6.24e-09,203;UBERON:0002384,2.63e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0,0.393364276848904,1.53531759238885,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,39.3336740057633,10.6288557159175,11.9355978893719,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,1.89185783910868,0,0,1.35426486594342,0.188242339542605,0,0.449446968890169,2.44867113896722,2.56743221660875,1.27867425159808,0,0.199463657621632,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,1.58231193720442,0.422510572623884,2.97646019951061,0.628975936525128,0.22465726229299,0.300353785683013,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,1.76171156811282,1.14681968437569,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,1.43094374583205,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.07813787429759,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.44737618286021,3.66714141391649,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0,0.393364276848904,1.53531759238885,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,39.3336740057633,10.6288557159175,11.9355978893719,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,1.89185783910868,0,0,1.35426486594342,0.188242339542605,0,0.449446968890169,2.44867113896722,2.56743221660875,1.27867425159808,0,0.199463657621632,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,1.58231193720442,0.422510572623884,2.97646019951061,0.628975936525128,0.22465726229299,0.300353785683013,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,1.76171156811282,1.14681968437569,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,1.43094374583205,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.07813787429759,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.44737618286021,3.66714141391649,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr10:115440857..115440877,+ | |short_description=p@chr10:115440857..115440877,+ | ||
}} | }} |
Latest revision as of 10:36, 23 July 2015
Short description: | p@chr10:115440857..115440877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:115440857..115440877, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-21 | 98 |
blood island | 1.36e-21 | 98 |
hemolymphoid system | 2.43e-19 | 108 |
bone marrow | 3.44e-16 | 76 |
bone element | 7.41e-15 | 82 |
skeletal element | 2.37e-13 | 90 |
immune system | 7.46e-13 | 93 |
skeletal system | 8.32e-12 | 100 |
blood | 3.12e-09 | 15 |
haemolymphatic fluid | 3.12e-09 | 15 |
organism substance | 3.12e-09 | 15 |
lateral plate mesoderm | 6.24e-09 | 203 |
connective tissue | 2.63e-07 | 371 |