FFCP PHASE1:Hg19::chr10:114939297..114939308,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr10:114939297..114939308,+ to FFCP PHASE1:Hg19::chr10:114939297..114939308,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:114939297..114939308,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:114939297..114939308,+ | |||
|id=chr10:114939297..114939308,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.37e-74!42;CL:0000860!1.86e-68!45;CL:0000766!2.16e-50!76;CL:0002194!6.89e-50!63;CL:0000576!6.89e-50!63;CL:0000040!6.89e-50!63;CL:0000559!6.89e-50!63;CL:0002009!3.54e-48!65;CL:0000839!2.54e-44!70;CL:0000557!1.30e-43!71;CL:0000738!3.22e-41!140;CL:0002087!1.36e-36!119;CL:0000763!2.23e-34!112;CL:0000049!2.23e-34!112;CL:0002393!8.07e-33!9;CL:0002397!8.07e-33!9;CL:0000037!4.21e-32!172;CL:0000566!4.21e-32!172;CL:0002031!3.15e-30!124;CL:0000988!6.62e-30!182;CL:0002032!7.19e-28!165;CL:0000837!7.19e-28!165;CL:0000875!7.89e-15!3;CL:0002396!7.89e-15!3;CL:0000767!2.60e-14!3;CL:0000134!3.16e-11!358;CL:0002320!7.46e-11!365;CL:0000219!1.54e-09!390;CL:0000034!5.87e-09!444;CL:0000048!5.72e-08!430;CL:0000723!9.57e-08!436;CL:0000842!4.05e-07!3;CL:0000784!9.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.10e-28;6!CL:0002397;4.10e-28;6!CL:0000860;5.13e-23;33!CL:0002057;5.13e-23;33!CL:0000576;5.94e-22;48!CL:0000766;2.21e-19;69!CL:0000473;1.88e-18;39!CL:0000234;1.88e-18;39!CL:0002087;3.93e-10;104!CL:0000763;6.83e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.60e-42,42;CL:0002057,3.60e-42,42;CL:0000473,7.49e-37,48;CL:0000234,7.49e-37,48;CL:0002194,2.13e-29,59;CL:0000576,2.13e-29,59;CL:0000040,2.13e-29,59;CL:0000559,2.13e-29,59;CL:0002009,1.96e-28,61;CL:0000839,2.81e-26,66;CL:0000557,6.95e-26,67;CL:0000766,4.45e-24,72;CL:0002393,5.33e-19,9;CL:0002397,5.33e-19,9;CL:0000763,6.07e-16,108;CL:0000049,6.07e-16,108;CL:0002087,6.05e-15,115;CL:0002031,2.66e-14,120;CL:0000738,1.48e-12,136;CL:0002032,1.64e-10,161;CL:0000837,1.64e-10,161;CL:0000037,4.80e-10,168;CL:0000988,1.68e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.15e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.90e-38!80;UBERON:0001474!5.85e-35!86;UBERON:0002390!2.27e-33!102;UBERON:0003061!2.27e-33!102;UBERON:0002193!8.37e-30!112;UBERON:0004765!7.50e-29!101;UBERON:0001434!7.50e-29!101;UBERON:0002405!1.41e-24!115;UBERON:0002204!5.87e-15!167;UBERON:0003081!3.15e-12!216;UBERON:0002384!2.41e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.42e-23,76;UBERON:0001474,4.08e-21,82;UBERON:0004765,3.27e-19,90;UBERON:0002405,1.40e-18,93;UBERON:0002390,1.30e-17,98;UBERON:0003061,1.30e-17,98;UBERON:0001434,2.97e-17,100;UBERON:0002193,6.07e-16,108;UBERON:0002204,4.14e-10,167;UBERON:0003081,3.43e-08,203 | |||
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|short_description=p@chr10:114939297..114939308,+ | |||
}} | }} |
Latest revision as of 10:34, 23 July 2015
Short description: | p@chr10:114939297..114939308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:114939297..114939308, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.60e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.60e-42 | 42 |
defensive cell | 7.49e-37 | 48 |
phagocyte | 7.49e-37 | 48 |
monopoietic cell | 2.13e-29 | 59 |
monocyte | 2.13e-29 | 59 |
monoblast | 2.13e-29 | 59 |
promonocyte | 2.13e-29 | 59 |
macrophage dendritic cell progenitor | 1.96e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.81e-26 | 66 |
granulocyte monocyte progenitor cell | 6.95e-26 | 67 |
myeloid leukocyte | 4.45e-24 | 72 |
intermediate monocyte | 5.33e-19 | 9 |
CD14-positive, CD16-positive monocyte | 5.33e-19 | 9 |
myeloid cell | 6.07e-16 | 108 |
common myeloid progenitor | 6.07e-16 | 108 |
nongranular leukocyte | 6.05e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.66e-14 | 120 |
leukocyte | 1.48e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-10 | 161 |
hematopoietic stem cell | 4.80e-10 | 168 |
hematopoietic cell | 1.68e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.42e-23 | 76 |
bone element | 4.08e-21 | 82 |
skeletal element | 3.27e-19 | 90 |
immune system | 1.40e-18 | 93 |
hematopoietic system | 1.30e-17 | 98 |
blood island | 1.30e-17 | 98 |
skeletal system | 2.97e-17 | 100 |
hemolymphoid system | 6.07e-16 | 108 |
musculoskeletal system | 4.14e-10 | 167 |
lateral plate mesoderm | 3.43e-08 | 203 |