FFCP PHASE1:Hg19::chr10:112462771..112462775,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:112462771..112462775,+ | |||
|coexpression_cluster_id=C380 | |coexpression_cluster_id=C380 | ||
|description=CAGE_peak_at_chr10:112462771..112462775,+ | |description=CAGE_peak_at_chr10:112462771..112462775,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.05e-34;1!CL:0000214;2.59e-12;3 | |ontology_enrichment_celltype_v019=CL:0000222;5.05e-34;1!CL:0000214;2.59e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.05e-34;1!UBERON:0005062;1.12e-09;4!UBERON:0007284;1.12e-09;4 | |ontology_enrichment_development_v019=UBERON:0004140;5.05e-34;1!UBERON:0005062;1.12e-09;4!UBERON:0007284;1.12e-09;4 | ||
|ontology_enrichment_disease=DOID:5409!3.71e-11!4;DOID:114!2.28e-07!2 | |ontology_enrichment_disease=DOID:5409!3.71e-11!4;DOID:114!2.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;9.07e-18;2!DOID:1287;1.44e-09;4 | |ontology_enrichment_disease_v019=DOID:114;9.07e-18;2!DOID:1287;1.44e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,7.67e-18,2;DOID:1287,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.37e-07!41;UBERON:0001890!1.37e-07!41;UBERON:0006240!1.37e-07!41;UBERON:0003080!2.37e-07!42;UBERON:0001869!3.03e-07!32 | |ontology_enrichment_uberon=UBERON:0002780!1.37e-07!41;UBERON:0001890!1.37e-07!41;UBERON:0006240!1.37e-07!41;UBERON:0003080!2.37e-07!42;UBERON:0001869!3.03e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0007100;1.13e-12;25!UBERON:0003978;1.85e-12;3!UBERON:0000946;1.85e-12;3!UBERON:0006915;2.59e-12;3!UBERON:0007616;2.59e-12;3!UBERON:0002217;2.59e-12;3!UBERON:0002018;2.59e-12;3!UBERON:0000948;5.09e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0007100;1.13e-12;25!UBERON:0003978;1.85e-12;3!UBERON:0000946;1.85e-12;3!UBERON:0006915;2.59e-12;3!UBERON:0007616;2.59e-12;3!UBERON:0002217;2.59e-12;3!UBERON:0002018;2.59e-12;3!UBERON:0000948;5.09e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.84e-34,1;UBERON:0005623,1.84e-34,1;UBERON:0003978,1.85e-12,3;UBERON:0009751,1.85e-12,3;UBERON:0000946,1.85e-12,3;UBERON:0002523,1.85e-12,3;UBERON:0005983,1.85e-12,3;UBERON:0002165,1.85e-12,3;UBERON:0002062,1.85e-12,3;UBERON:0007280,1.85e-12,3;UBERON:0006915,2.59e-12,3;UBERON:0007616,2.59e-12,3;UBERON:0002217,2.59e-12,3;UBERON:0002018,2.59e-12,3;UBERON:0007100,7.72e-12,27 | |||
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| ||
|short_description=p@chr10:112462771..112462775,+ | |short_description=p@chr10:112462771..112462775,+ | ||
}} | }} |
Latest revision as of 10:25, 23 July 2015
Short description: | p@chr10:112462771..112462775, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112462771..112462775, + |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.84e-34 | 1 |
semi-lunar valve | 1.84e-34 | 1 |
valve | 1.85e-12 | 3 |
cardiac mesenchyme | 1.85e-12 | 3 |
cardial valve | 1.85e-12 | 3 |
tunica intima | 1.85e-12 | 3 |
heart layer | 1.85e-12 | 3 |
endocardium | 1.85e-12 | 3 |
endocardial cushion | 1.85e-12 | 3 |
presumptive endocardium | 1.85e-12 | 3 |
stratified squamous epithelium | 2.59e-12 | 3 |
layer of synovial tissue | 2.59e-12 | 3 |
synovial joint | 2.59e-12 | 3 |
synovial membrane of synovial joint | 2.59e-12 | 3 |
primary circulatory organ | 7.72e-12 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.67e-18 | 2 |
cardiovascular system disease | 1.32e-09 | 4 |