FFCP PHASE1:Hg19::chr10:112257429..112257447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:112257429..112257447,- | |||
|coexpression_cluster_id=C2977 | |coexpression_cluster_id=C2977 | ||
|description=CAGE_peak_at_chr10:112257429..112257447,- | |description=CAGE_peak_at_chr10:112257429..112257447,- | ||
|id=chr10:112257429..112257447,- | |id=chr10:112257429..112257447,- | ||
|ontology_enrichment_celltype=CL:0002057!4.34e-25!42;CL:0000860!1.85e-22!45;CL:0000738!5.80e-20!140;CL:0002087!1.64e-14!119;CL:0002031!6.77e-14!124;CL:0000766!2.22e-13!76;CL:0000557!2.47e-12!71;CL:0002009!5.66e-12!65;CL:0002320!2.51e-11!365;CL:0000134!3.31e-11!358;CL:0002194!3.92e-11!63;CL:0000576!3.92e-11!63;CL:0000040!3.92e-11!63;CL:0000559!3.92e-11!63;CL:0000037!5.27e-11!172;CL:0000566!5.27e-11!172;CL:0000839!2.07e-10!70;CL:0000988!3.19e-10!182;CL:0000003!3.97e-10!722;CL:0000063!8.86e-10!578;CL:0002032!1.51e-09!165;CL:0000837!1.51e-09!165;CL:0002371!1.52e-09!591;CL:0000048!3.19e-09!430;CL:0000723!6.86e-09!436;CL:0000219!1.02e-08!390;CL:0000034!4.38e-08!444;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000012!1.10e-07!682;CL:0000144!4.57e-07!625;CL:0002393!6.26e-07!9;CL:0002397!6.26e-07!9 | |ontology_enrichment_celltype=CL:0002057!4.34e-25!42;CL:0000860!1.85e-22!45;CL:0000738!5.80e-20!140;CL:0002087!1.64e-14!119;CL:0002031!6.77e-14!124;CL:0000766!2.22e-13!76;CL:0000557!2.47e-12!71;CL:0002009!5.66e-12!65;CL:0002320!2.51e-11!365;CL:0000134!3.31e-11!358;CL:0002194!3.92e-11!63;CL:0000576!3.92e-11!63;CL:0000040!3.92e-11!63;CL:0000559!3.92e-11!63;CL:0000037!5.27e-11!172;CL:0000566!5.27e-11!172;CL:0000839!2.07e-10!70;CL:0000988!3.19e-10!182;CL:0000003!3.97e-10!722;CL:0000063!8.86e-10!578;CL:0002032!1.51e-09!165;CL:0000837!1.51e-09!165;CL:0002371!1.52e-09!591;CL:0000048!3.19e-09!430;CL:0000723!6.86e-09!436;CL:0000219!1.02e-08!390;CL:0000034!4.38e-08!444;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000012!1.10e-07!682;CL:0000144!4.57e-07!625;CL:0002393!6.26e-07!9;CL:0002397!6.26e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.39e-22;33!CL:0002057;6.39e-22;33!CL:0000576;3.39e-15;48!CL:0000473;1.21e-13;39!CL:0000234;1.21e-13;39!CL:0000766;2.74e-11;69!CL:0002087;6.70e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-31,42;CL:0002057,2.83e-31,42;CL:0000738,9.22e-28,136;CL:0000473,1.35e-24,48;CL:0000234,1.35e-24,48;CL:0000766,2.76e-21,72;CL:0002087,3.77e-20,115;CL:0002031,5.28e-20,120;CL:0000557,1.54e-19,67;CL:0002009,7.44e-19,61;CL:0002194,1.10e-17,59;CL:0000576,1.10e-17,59;CL:0000040,1.10e-17,59;CL:0000559,1.10e-17,59;CL:0000037,1.17e-17,168;CL:0000839,4.39e-17,66;CL:0002320,4.21e-16,361;CL:0000134,5.52e-16,354;CL:0002032,6.31e-16,161;CL:0000837,6.31e-16,161;CL:0000988,1.03e-15,177;CL:0000048,8.51e-13,427;CL:0000763,1.02e-12,108;CL:0000049,1.02e-12,108;CL:0000219,1.21e-12,386;CL:0000723,1.96e-12,433;CL:0000034,1.06e-11,441;CL:0002393,2.42e-08,9;CL:0002397,2.42e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.46e-13!80;UBERON:0002193!5.44e-13!112;UBERON:0002390!1.58e-12!102;UBERON:0003061!1.58e-12!102;UBERON:0001474!2.30e-12!86;UBERON:0004765!7.23e-12!101;UBERON:0001434!7.23e-12!101;UBERON:0002405!2.00e-11!115;UBERON:0002384!5.00e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!2.46e-13!80;UBERON:0002193!5.44e-13!112;UBERON:0002390!1.58e-12!102;UBERON:0003061!1.58e-12!102;UBERON:0001474!2.30e-12!86;UBERON:0004765!7.23e-12!101;UBERON:0001434!7.23e-12!101;UBERON:0002405!2.00e-11!115;UBERON:0002384!5.00e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.57e-19,76;UBERON:0002405,8.03e-19,93;UBERON:0002390,1.99e-18,98;UBERON:0003061,1.99e-18,98;UBERON:0002193,2.55e-18,108;UBERON:0001474,3.31e-18,82;UBERON:0004765,1.82e-16,90;UBERON:0001434,6.40e-15,100;UBERON:0002384,1.02e-14,371;UBERON:0003081,2.77e-08,203;UBERON:0002204,4.87e-07,167 | |||
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| ||
|short_description=p@chr10:112257429..112257447,- | |short_description=p@chr10:112257429..112257447,- | ||
}} | }} |
Latest revision as of 10:23, 23 July 2015
Short description: | p@chr10:112257429..112257447, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112257429..112257447, - |
Coexpression cluster: | C2977_CD14_Dendritic_serous_Smooth_Basophils_cerebellum_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.83e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-31 | 42 |
leukocyte | 9.22e-28 | 136 |
defensive cell | 1.35e-24 | 48 |
phagocyte | 1.35e-24 | 48 |
myeloid leukocyte | 2.76e-21 | 72 |
nongranular leukocyte | 3.77e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 5.28e-20 | 120 |
granulocyte monocyte progenitor cell | 1.54e-19 | 67 |
macrophage dendritic cell progenitor | 7.44e-19 | 61 |
monopoietic cell | 1.10e-17 | 59 |
monocyte | 1.10e-17 | 59 |
monoblast | 1.10e-17 | 59 |
promonocyte | 1.10e-17 | 59 |
hematopoietic stem cell | 1.17e-17 | 168 |
myeloid lineage restricted progenitor cell | 4.39e-17 | 66 |
connective tissue cell | 4.21e-16 | 361 |
mesenchymal cell | 5.52e-16 | 354 |
hematopoietic oligopotent progenitor cell | 6.31e-16 | 161 |
hematopoietic multipotent progenitor cell | 6.31e-16 | 161 |
hematopoietic cell | 1.03e-15 | 177 |
multi fate stem cell | 8.51e-13 | 427 |
myeloid cell | 1.02e-12 | 108 |
common myeloid progenitor | 1.02e-12 | 108 |
motile cell | 1.21e-12 | 386 |
somatic stem cell | 1.96e-12 | 433 |
stem cell | 1.06e-11 | 441 |
intermediate monocyte | 2.42e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.42e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.57e-19 | 76 |
immune system | 8.03e-19 | 93 |
hematopoietic system | 1.99e-18 | 98 |
blood island | 1.99e-18 | 98 |
hemolymphoid system | 2.55e-18 | 108 |
bone element | 3.31e-18 | 82 |
skeletal element | 1.82e-16 | 90 |
skeletal system | 6.40e-15 | 100 |
connective tissue | 1.02e-14 | 371 |
lateral plate mesoderm | 2.77e-08 | 203 |
musculoskeletal system | 4.87e-07 | 167 |