FFCP PHASE1:Hg19::chr10:106205466..106205487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:106205466..106205487,+ | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr10:106205466..106205487,+ | |description=CAGE_peak_at_chr10:106205466..106205487,+ | ||
|id=chr10:106205466..106205487,+ | |id=chr10:106205466..106205487,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.22e-14!13;CL:0000220!3.46e-12!246;CL:0002321!5.53e-12!248;CL:0000359!3.87e-11!32;CL:0002077!2.65e-09!33;CL:0002166!7.75e-09!3;CL:0002621!9.44e-09!3;CL:0000362!5.80e-08!8;CL:0000192!1.13e-07!42;CL:0000514!1.13e-07!42;CL:0002592!1.22e-07!3;CL:0000144!2.12e-07!625 | |ontology_enrichment_celltype=CL:0002159!1.22e-14!13;CL:0000220!3.46e-12!246;CL:0002321!5.53e-12!248;CL:0000359!3.87e-11!32;CL:0002077!2.65e-09!33;CL:0002166!7.75e-09!3;CL:0002621!9.44e-09!3;CL:0000362!5.80e-08!8;CL:0000192!1.13e-07!42;CL:0000514!1.13e-07!42;CL:0002592!1.22e-07!3;CL:0000144!2.12e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.20e-39;14!CL:0002166;7.78e-28;3!CL:0002621;1.52e-27;3!CL:0000362;6.78e-24;9!CL:0000317;3.75e-18;2!CL:1000448;3.75e-18;2!CL:0002308;3.75e-18;2!CL:0002140;3.75e-18;2!CL:0000312;2.94e-16;5!CL:0002077;3.28e-14;34!CL:0000240;1.20e-13;6!CL:0000311;1.20e-13;6!CL:0000079;1.20e-13;6!CL:0000237;1.20e-13;6!CL:0000622;8.31e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.90e-39,14;CL:0002166,7.81e-28,3;CL:0002621,1.60e-27,3;CL:0000362,4.75e-24,9;CL:0000317,1.20e-18,2;CL:1000448,1.20e-18,2;CL:0002308,1.20e-18,2;CL:0002140,1.20e-18,2;CL:0000312,3.93e-16,5;CL:0002077,1.33e-15,34;CL:0000240,1.53e-13,6;CL:0000311,1.53e-13,6;CL:0000079,1.53e-13,6;CL:0000237,1.53e-13,6;CL:0000036,1.53e-13,6;CL:0000357,1.53e-13,6;CL:0000114,1.53e-13,6;CL:0000221,2.61e-08,72;CL:0000622,5.31e-08,5;CL:0000076,9.60e-08,63;CL:0002321,4.22e-07,250;CL:0000154,8.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;1.20e-13;6!CL:0000114;1.20e-13;6 | |||
|ontology_enrichment_disease=DOID:2394!4.20e-09!14;DOID:193!2.87e-07!29 | |ontology_enrichment_disease=DOID:2394!4.20e-09!14;DOID:193!2.87e-07!29 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.88e-12!33;UBERON:0004571!2.88e-12!33;UBERON:0001637!1.15e-11!42;UBERON:0003509!1.15e-11!42;UBERON:0004572!1.15e-11!42;UBERON:0001949!9.44e-09!3;UBERON:0000914!1.43e-08!83;UBERON:0002329!1.43e-08!83;UBERON:0003077!1.43e-08!83;UBERON:0003059!1.43e-08!83;UBERON:0007282!1.43e-08!83;UBERON:0009618!1.43e-08!83;UBERON:0007285!1.43e-08!83;UBERON:0000486!7.96e-08!82;UBERON:0001621!1.22e-07!3;UBERON:0000992!1.82e-07!13;UBERON:0002118!2.86e-07!5;UBERON:0004532!2.86e-07!5;UBERON:0001981!6.54e-07!60;UBERON:0007500!6.54e-07!60;UBERON:0004537!6.54e-07!60;UBERON:0006965!6.54e-07!60;UBERON:0004290!7.92e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.52e-27;3!UBERON:0001708;4.83e-21;4!UBERON:0008895;4.83e-21;4!UBERON:0010371;6.64e-21;31!UBERON:0002419;3.75e-18;2!UBERON:0007771;3.75e-18;2!UBERON:0003297;3.75e-18;2!UBERON:0001821;3.75e-18;2!UBERON:0003487;3.75e-18;2!UBERON:0001820;3.75e-18;2!UBERON:0011159;5.89e-17;5!UBERON:0001003;2.60e-14;15!UBERON:0007376;2.60e-14;15!UBERON:0003929;3.78e-12;7!UBERON:0003350;1.08e-10;8!UBERON:0001828;1.08e-10;8!UBERON:0011137;5.52e-08;11!UBERON:0010323;5.52e-08;11!UBERON:0000486;2.76e-07;12!UBERON:0003729;9.30e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.60e-27,3;UBERON:0001708,4.84e-21,4;UBERON:0008895,4.84e-21,4;UBERON:0002419,1.20e-18,2;UBERON:0007771,1.20e-18,2;UBERON:0003297,1.20e-18,2;UBERON:0001821,1.20e-18,2;UBERON:0003487,1.20e-18,2;UBERON:0001820,1.20e-18,2;UBERON:0005089,1.20e-18,2;UBERON:0005088,1.20e-18,2;UBERON:0011159,5.90e-17,5;UBERON:0001003,2.10e-14,15;UBERON:0007376,2.10e-14,15;UBERON:0007383,2.10e-14,15;UBERON:0010188,3.17e-14,6;UBERON:0002539,3.17e-14,6;UBERON:0008816,3.17e-14,6;UBERON:0003350,1.10e-10,8;UBERON:0001828,1.10e-10,8;UBERON:0003102,4.83e-09,99;UBERON:0010323,5.53e-08,11;UBERON:0000033,4.44e-07,56;UBERON:0003729,9.40e-07,13 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0,0,0,0,5.41130388857231,7.36414525595254,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,2.63400684980701,1.1240175325762,1.40740561376283,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,14.9974134378843,37.7959788447434,6.66342957039216,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,1.09970290300263,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0.94443704049192,0.6970372701606,0,0,0,0.37064843820784,0.572499546967965,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,1.65412492502765,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,1.08723364858891,0.732219924186332,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.310525913752519,0,0,0,0,1.52322084867518,0.406870733204662,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:106205466..106205487,+ | |short_description=p@chr10:106205466..106205487,+ | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p@chr10:106205466..106205487, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106205466..106205487, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.90e-39 | 14 |
epithelial cell of Malassez | 7.81e-28 | 3 |
gingival epithelial cell | 1.60e-27 | 3 |
epidermal cell | 4.75e-24 | 9 |
sebum secreting cell | 1.20e-18 | 2 |
epithelial cell of sweat gland | 1.20e-18 | 2 |
epithelial cell of skin gland | 1.20e-18 | 2 |
acinar cell of sebaceous gland | 1.20e-18 | 2 |
keratinocyte | 3.93e-16 | 5 |
ecto-epithelial cell | 1.33e-15 | 34 |
stratified squamous epithelial cell | 1.53e-13 | 6 |
keratin accumulating cell | 1.53e-13 | 6 |
stratified epithelial cell | 1.53e-13 | 6 |
keratinizing barrier epithelial cell | 1.53e-13 | 6 |
epithelial fate stem cell | 1.53e-13 | 6 |
stratified epithelial stem cell | 1.53e-13 | 6 |
surface ectodermal cell | 1.53e-13 | 6 |
ectodermal cell | 2.61e-08 | 72 |
acinar cell | 5.31e-08 | 5 |
squamous epithelial cell | 9.60e-08 | 63 |
embryonic cell | 4.22e-07 | 250 |
protein secreting cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.60e-27 | 3 |
jaw skeleton | 4.84e-21 | 4 |
splanchnocranium | 4.84e-21 | 4 |
skin gland | 1.20e-18 | 2 |
epidermis gland | 1.20e-18 | 2 |
gland of integumental system | 1.20e-18 | 2 |
sebaceous gland | 1.20e-18 | 2 |
skin sebaceous gland | 1.20e-18 | 2 |
sweat gland | 1.20e-18 | 2 |
sweat gland placode | 1.20e-18 | 2 |
sebaceous gland placode | 1.20e-18 | 2 |
primary subdivision of cranial skeletal system | 5.90e-17 | 5 |
skin epidermis | 2.10e-14 | 15 |
outer epithelium | 2.10e-14 | 15 |
enveloping layer of ectoderm | 2.10e-14 | 15 |
protuberance | 3.17e-14 | 6 |
pharyngeal arch | 3.17e-14 | 6 |
embryonic head | 3.17e-14 | 6 |
epithelium of mucosa | 1.10e-10 | 8 |
gingiva | 1.10e-10 | 8 |
surface structure | 4.83e-09 | 99 |
cranial skeletal system | 5.53e-08 | 11 |
head | 4.44e-07 | 56 |
mouth mucosa | 9.40e-07 | 13 |