FFCP PHASE1:Hg19::chr10:105671007..105671022,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105671007..105671022,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:105671007..105671022,+ | |description=CAGE_peak_at_chr10:105671007..105671022,+ | ||
|id=chr10:105671007..105671022,+ | |id=chr10:105671007..105671022,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.99e-26!42;CL:0000738!1.37e-25!140;CL:0000860!2.32e-24!45;CL:0000037!1.30e-23!172;CL:0000566!1.30e-23!172;CL:0002087!1.99e-23!119;CL:0000988!7.80e-22!182;CL:0002032!1.80e-20!165;CL:0000837!1.80e-20!165;CL:0000766!9.59e-20!76;CL:0002031!5.20e-19!124;CL:0002194!8.57e-16!63;CL:0000576!8.57e-16!63;CL:0000040!8.57e-16!63;CL:0000559!8.57e-16!63;CL:0000763!1.01e-15!112;CL:0000049!1.01e-15!112;CL:0000839!1.54e-15!70;CL:0002009!3.51e-15!65;CL:0000557!1.50e-13!71;CL:0000775!3.45e-13!3;CL:0000842!1.32e-11!3;CL:0000791!2.08e-09!18;CL:0000789!2.08e-09!18;CL:0002420!2.08e-09!18;CL:0002419!2.08e-09!18;CL:0000790!2.08e-09!18;CL:0000224!8.03e-09!4;CL:0000625!1.55e-08!11;CL:0000094!1.74e-08!8;CL:0000084!2.30e-08!25;CL:0000827!2.30e-08!25;CL:0000134!6.89e-07!358 | |ontology_enrichment_celltype=CL:0002057!1.99e-26!42;CL:0000738!1.37e-25!140;CL:0000860!2.32e-24!45;CL:0000037!1.30e-23!172;CL:0000566!1.30e-23!172;CL:0002087!1.99e-23!119;CL:0000988!7.80e-22!182;CL:0002032!1.80e-20!165;CL:0000837!1.80e-20!165;CL:0000766!9.59e-20!76;CL:0002031!5.20e-19!124;CL:0002194!8.57e-16!63;CL:0000576!8.57e-16!63;CL:0000040!8.57e-16!63;CL:0000559!8.57e-16!63;CL:0000763!1.01e-15!112;CL:0000049!1.01e-15!112;CL:0000839!1.54e-15!70;CL:0002009!3.51e-15!65;CL:0000557!1.50e-13!71;CL:0000775!3.45e-13!3;CL:0000842!1.32e-11!3;CL:0000791!2.08e-09!18;CL:0000789!2.08e-09!18;CL:0002420!2.08e-09!18;CL:0002419!2.08e-09!18;CL:0000790!2.08e-09!18;CL:0000224!8.03e-09!4;CL:0000625!1.55e-08!11;CL:0000094!1.74e-08!8;CL:0000084!2.30e-08!25;CL:0000827!2.30e-08!25;CL:0000134!6.89e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-32;33!CL:0002057;4.42e-32;33!CL:0000775;7.92e-25;3!CL:0000473;1.81e-23;39!CL:0000234;1.81e-23;39!CL:0000094;1.09e-20;8!CL:0000576;4.53e-17;48!CL:0000081;3.02e-15;11!CL:0000766;1.46e-12;69!CL:0000763;1.64e-10;100!CL:0000771;3.58e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.58e-29,72;CL:0000860,4.65e-27,42;CL:0002057,4.65e-27,42;CL:0000775,6.22e-25,3;CL:0000473,1.23e-23,48;CL:0000234,1.23e-23,48;CL:0000094,9.50e-21,8;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002194,7.69e-19,59;CL:0000576,7.69e-19,59;CL:0000040,7.69e-19,59;CL:0000559,7.69e-19,59;CL:0002009,3.21e-18,61;CL:0000839,7.85e-17,66;CL:0000557,1.41e-16,67;CL:0000081,2.74e-15,11;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000771,3.58e-10,2;CL:0002087,1.60e-09,115;CL:0002031,4.18e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-21;42!CL:0000049;8.20e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.45e-19!102;UBERON:0003061!3.45e-19!102;UBERON:0002193!6.37e-17!112;UBERON:0002371!1.45e-11!80;UBERON:0001474!1.78e-10!86;UBERON:0002405!1.08e-08!115;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15;UBERON:0004765!2.51e-08!101;UBERON:0001434!2.51e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.37e-14,76;UBERON:0001474,1.67e-13,82;UBERON:0004765,2.82e-12,90;UBERON:0002405,7.20e-12,93;UBERON:0002390,3.03e-11,98;UBERON:0003061,3.03e-11,98;UBERON:0001434,5.18e-11,100;UBERON:0002193,3.63e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,2.8769239232215,4.61089271752381,2.36482229888585,0,0,0,0,0,0,0.306083892370903,0,0,7.25672860410775,8.37747362010854,5.96714650745772,0.290209238628584,0,0,3.51748131359441,0,3.69221035998698,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0.384273959177026,0.650296737799391,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,2.8769239232215,4.61089271752381,2.36482229888585,0,0,0,0,0,0,0.306083892370903,0,0,7.25672860410775,8.37747362010854,5.96714650745772,0.290209238628584,0,0,3.51748131359441,0,3.69221035998698,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0.384273959177026,0.650296737799391,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:105671007..105671022,+ | |short_description=p@chr10:105671007..105671022,+ | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105671007..105671022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105671007..105671022, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.58e-29 | 72 |
classical monocyte | 4.65e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-27 | 42 |
neutrophil | 6.22e-25 | 3 |
defensive cell | 1.23e-23 | 48 |
phagocyte | 1.23e-23 | 48 |
granulocyte | 9.50e-21 | 8 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
monopoietic cell | 7.69e-19 | 59 |
monocyte | 7.69e-19 | 59 |
monoblast | 7.69e-19 | 59 |
promonocyte | 7.69e-19 | 59 |
macrophage dendritic cell progenitor | 3.21e-18 | 61 |
myeloid lineage restricted progenitor cell | 7.85e-17 | 66 |
granulocyte monocyte progenitor cell | 1.41e-16 | 67 |
blood cell | 2.74e-15 | 11 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
eosinophil | 3.58e-10 | 2 |
nongranular leukocyte | 1.60e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.18e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.37e-14 | 76 |
bone element | 1.67e-13 | 82 |
skeletal element | 2.82e-12 | 90 |
immune system | 7.20e-12 | 93 |
hematopoietic system | 3.03e-11 | 98 |
blood island | 3.03e-11 | 98 |
skeletal system | 5.18e-11 | 100 |
hemolymphoid system | 3.63e-10 | 108 |